RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DCAF8Q5TAQ9 597 aa14.34□□□□□ -0.11
DEPDC1-201ENST00000370966 BICD2Q8TD16 824 aa14.34□□□□□ -0.11
DEPDC1-201ENST00000370966 AIMP1Q12904 312 aaKnown RBP14.34□□□□□ -0.11
DEPDC1-201ENST00000370966 HDGFL1Q5TGJ6 251 aa14.34□□□□□ -0.11
DEPDC1-201ENST00000370966 THOC2Q8NI27 1593 aaKnown RBP14.33□□□□□ -0.11
DEPDC1-201ENST00000370966 APPP05067 770 aa14.33□□□□□ -0.11
DEPDC1-201ENST00000370966 TRAK2O60296 914 aa14.33□□□□□ -0.12
DEPDC1-201ENST00000370966 TPM3P06753 285 aa14.33□□□□□ -0.12
DEPDC1-201ENST00000370966 NFE2L2Q16236 605 aa14.33□□□□□ -0.12
DEPDC1-201ENST00000370966 ERC1Q8IUD2 1116 aa14.33□□□□□ -0.12
DEPDC1-201ENST00000370966 MBD3O95983 291 aa14.33□□□□□ -0.12
DEPDC1-201ENST00000370966 HIP1O00291 1037 aa14.32□□□□□ -0.12
DEPDC1-201ENST00000370966 NEK4P51957 841 aa14.32□□□□□ -0.12
DEPDC1-201ENST00000370966 ABCC11Q96J66 1382 aa14.32□□□□□ -0.12
DEPDC1-201ENST00000370966 C1orf115Q9H7X2 142 aa14.32□□□□□ -0.12
DEPDC1-201ENST00000370966 ESCO1Q5FWF5 840 aa14.31□□□□□ -0.12
DEPDC1-201ENST00000370966 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
DEPDC1-201ENST00000370966 RPAP2Q8IXW5 612 aaPredicted RBP14.31□□□□□ -0.12
DEPDC1-201ENST00000370966 NEUROD6Q96NK8 337 aa14.31□□□□□ -0.12
DEPDC1-201ENST00000370966 CLSTN1O94985 981 aa14.31□□□□□ -0.12
DEPDC1-201ENST00000370966 PDCP20941 246 aa14.3□□□□□ -0.12
DEPDC1-201ENST00000370966 TPD52L1Q16890 204 aaPredicted RBP14.3□□□□□ -0.12
DEPDC1-201ENST00000370966 RALYLQ86SE5 291 aaKnown RBP14.3□□□□□ -0.12
DEPDC1-201ENST00000370966 MARCH6O60337 910 aa14.3□□□□□ -0.12
DEPDC1-201ENST00000370966 HSP90AA2PQ14568 343 aaPredicted RBP14.3□□□□□ -0.12
DEPDC1-201ENST00000370966 AMOTL1Q8IY63 956 aa14.3□□□□□ -0.12
DEPDC1-201ENST00000370966 FSD1Q9BTV5 496 aa14.3□□□□□ -0.12
DEPDC1-201ENST00000370966 CCDC73Q6ZRK6 1079 aa14.3□□□□□ -0.12
DEPDC1-201ENST00000370966 CD109Q6YHK3 1445 aa14.3□□□□□ -0.12
DEPDC1-201ENST00000370966 TPM1P09493 284 aa14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 SRCIN1Q9C0H9 1055 aa14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 CWC22Q9HCG8 908 aaKnown RBP14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 HOOK1Q9UJC3 728 aaKnown RBP14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 CREBRFQ8IUR6 639 aa14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 ADGRL1O94910 1474 aa14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 GPATCH8Q9UKJ3 1502 aaKnown RBP14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 TSR1Q2NL82 804 aaKnown RBP14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 NUDT16Q96DE0 195 aaKnown RBP14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 NOL10Q9BSC4 688 aaKnown RBP14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 LRRCC1Q9C099 1032 aa14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 SCAF11Q99590 1463 aaKnown RBP14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 SASS6Q6UVJ0 657 aa14.29□□□□□ -0.12
DEPDC1-201ENST00000370966 SYTL4Q96C24 671 aaPredicted RBP14.28□□□□□ -0.12
DEPDC1-201ENST00000370966 PKNOX2Q96KN3 472 aa14.28□□□□□ -0.12
DEPDC1-201ENST00000370966 RARSP54136 660 aaKnown RBP14.28□□□□□ -0.12
DEPDC1-201ENST00000370966 PROSER2Q86WR7 435 aaPredicted RBP14.28□□□□□ -0.12
DEPDC1-201ENST00000370966 ARID3AQ99856 593 aa14.28□□□□□ -0.12
DEPDC1-201ENST00000370966 NASPP49321 788 aaPredicted RBP14.27□□□□□ -0.12
DEPDC1-201ENST00000370966 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.12
DEPDC1-201ENST00000370966 NKTRP30414 1462 aaKnown RBP14.27□□□□□ -0.12
DEPDC1-201ENST00000370966 ALDH1L2Q3SY69 923 aa14.27□□□□□ -0.12
DEPDC1-201ENST00000370966 VPS37DQ86XT2 251 aa14.27□□□□□ -0.12
DEPDC1-201ENST00000370966 FAM43AQ8N2R8 423 aa14.27□□□□□ -0.12
DEPDC1-201ENST00000370966 ADGRF5Q8IZF2 1346 aa14.27□□□□□ -0.13
DEPDC1-201ENST00000370966 ERICH2A1L162 156 aa14.27□□□□□ -0.13
DEPDC1-201ENST00000370966 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.27□□□□□ -0.13
DEPDC1-201ENST00000370966 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
DEPDC1-201ENST00000370966 SAFBQ15424 915 aaKnown RBP eCLIP14.27□□□□□ -0.13
DEPDC1-201ENST00000370966 SLC26A8Q96RN1 970 aa14.27□□□□□ -0.13
DEPDC1-201ENST00000370966 ZNF530Q6P9A1 599 aaPredicted RBP14.26□□□□□ -0.13
DEPDC1-201ENST00000370966 WASHC4Q2M389 1173 aa14.26□□□□□ -0.13
DEPDC1-201ENST00000370966 NFXL1Q6ZNB6 911 aa14.26□□□□□ -0.13
DEPDC1-201ENST00000370966 RRS1Q15050 365 aaKnown RBP14.26□□□□□ -0.13
DEPDC1-201ENST00000370966 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
DEPDC1-201ENST00000370966 ZNF608Q9ULD9 1512 aaPredicted RBP14.26□□□□□ -0.13
DEPDC1-201ENST00000370966 PTPRKQ15262 1439 aa14.26□□□□□ -0.13
DEPDC1-201ENST00000370966 UGGT2Q9NYU1 1516 aa14.26□□□□□ -0.13
DEPDC1-201ENST00000370966 K7ELQ4 463 aaPredicted RBP14.25□□□□□ -0.13
DEPDC1-201ENST00000370966 MAPKBP1O60336 1514 aa14.25□□□□□ -0.13
DEPDC1-201ENST00000370966 LETM1O95202 739 aaPredicted RBP14.25□□□□□ -0.13
DEPDC1-201ENST00000370966 NSD2O96028 1365 aa14.25□□□□□ -0.13
DEPDC1-201ENST00000370966 POGZQ7Z3K3 1410 aa14.25□□□□□ -0.13
DEPDC1-201ENST00000370966 GOLGA6L1Q8N7Z2 621 aa14.25□□□□□ -0.13
DEPDC1-201ENST00000370966 ANKRD20A12PQ8NF67 263 aa14.25□□□□□ -0.13
DEPDC1-201ENST00000370966 PES1O00541 588 aaKnown RBP14.24□□□□□ -0.13
DEPDC1-201ENST00000370966 DUSP27Q5VZP5 1158 aa14.24□□□□□ -0.13
DEPDC1-201ENST00000370966 CCDC47Q96A33 483 aaKnown RBP14.24□□□□□ -0.13
DEPDC1-201ENST00000370966 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
DEPDC1-201ENST00000370966 TPM2P07951 284 aa14.24□□□□□ -0.13
DEPDC1-201ENST00000370966 ANKLE2Q86XL3 938 aa14.24□□□□□ -0.13
DEPDC1-201ENST00000370966 SSH1Q8WYL5 1049 aa14.24□□□□□ -0.13
DEPDC1-201ENST00000370966 C14orf93Q9H972 538 aaKnown RBP14.24□□□□□ -0.13
DEPDC1-201ENST00000370966 LRPPRCP42704 1394 aaKnown RBP14.23□□□□□ -0.13
DEPDC1-201ENST00000370966 DHX29Q7Z478 1369 aaKnown RBP14.23□□□□□ -0.13
DEPDC1-201ENST00000370966 IDI1Q13907 227 aa14.23□□□□□ -0.13
DEPDC1-201ENST00000370966 CAVIN1Q6NZI2 390 aaKnown RBP14.23□□□□□ -0.13
DEPDC1-201ENST00000370966 FAM135AQ9P2D6 1515 aa14.23□□□□□ -0.13
DEPDC1-201ENST00000370966 NOC3LQ8WTT2 800 aaKnown RBP14.23□□□□□ -0.13
DEPDC1-201ENST00000370966 PRPF40AO75400 957 aaKnown RBP14.21□□□□□ -0.13
DEPDC1-201ENST00000370966 C20orf194Q5TEA3 1177 aa14.21□□□□□ -0.13
DEPDC1-201ENST00000370966 TBC1D2BQ9UPU7 963 aa14.21□□□□□ -0.13
DEPDC1-201ENST00000370966 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
DEPDC1-201ENST00000370966 IPO7O95373 1038 aaKnown RBP14.21□□□□□ -0.13
DEPDC1-201ENST00000370966 CCDC39Q9UFE4 941 aa14.21□□□□□ -0.13
DEPDC1-201ENST00000370966 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.13
DEPDC1-201ENST00000370966 ANKRD1Q15327 319 aa14.21□□□□□ -0.14
DEPDC1-201ENST00000370966 NAT10Q9H0A0 1025 aaKnown RBP14.21□□□□□ -0.14
DEPDC1-201ENST00000370966 SPG7Q9UQ90 795 aa14.21□□□□□ -0.14
DEPDC1-201ENST00000370966 CYP46A1Q9Y6A2 500 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms