RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 RBM42Q9BTD8 480 aaKnown RBP10.41□□□□□ -0.74
SSR2-202ENST00000368311 NCOA3Q9Y6Q9 1424 aa10.4□□□□□ -0.74
SSR2-202ENST00000368311 CHMP3Q9Y3E7 222 aa10.4□□□□□ -0.74
SSR2-202ENST00000368311 CABP1Q9NZU7 370 aa10.4□□□□□ -0.75
SSR2-202ENST00000368311 NSD3Q9BZ95 1437 aa10.4□□□□□ -0.75
SSR2-202ENST00000368311 DDB1Q16531 1140 aa10.39□□□□□ -0.75
SSR2-202ENST00000368311 USP21Q9UK80 565 aa10.39□□□□□ -0.75
SSR2-202ENST00000368311 API5Q9BZZ5 524 aaKnown RBP10.39□□□□□ -0.75
SSR2-202ENST00000368311 ZNF530Q6P9A1 599 aaPredicted RBP10.38□□□□□ -0.75
SSR2-202ENST00000368311 ERVK-7P63135 1459 aa10.38□□□□□ -0.75
SSR2-202ENST00000368311 MTHFSP49914 203 aa10.38□□□□□ -0.75
SSR2-202ENST00000368311 ST5P78524 1137 aa10.38□□□□□ -0.75
SSR2-202ENST00000368311 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
SSR2-202ENST00000368311 CCDC30Q5VVM6 783 aa10.37□□□□□ -0.75
SSR2-202ENST00000368311 RUNDC1Q96C34 613 aa10.37□□□□□ -0.75
SSR2-202ENST00000368311 USP35Q9P2H5 1018 aa10.37□□□□□ -0.75
SSR2-202ENST00000368311 PTPRTO14522 1441 aa10.37□□□□□ -0.75
SSR2-202ENST00000368311 JCADQ9P266 1359 aa10.37□□□□□ -0.75
SSR2-202ENST00000368311 ARHGEF12Q9NZN5 1544 aa10.37□□□□□ -0.75
SSR2-202ENST00000368311 AAMPQ13685 434 aa10.37□□□□□ -0.75
SSR2-202ENST00000368311 IFNL2Q8IZJ0 200 aa10.37□□□□□ -0.75
SSR2-202ENST00000368311 PLXNC1O60486 1568 aa10.37□□□□□ -0.75
SSR2-202ENST00000368311 FOXO3O43524 673 aa10.36□□□□□ -0.75
SSR2-202ENST00000368311 DDX54Q8TDD1 881 aaKnown RBP10.36□□□□□ -0.75
SSR2-202ENST00000368311 ZC3H13Q5T200 1668 aaKnown RBP10.36□□□□□ -0.75
SSR2-202ENST00000368311 CPS1P31327 1500 aa10.36□□□□□ -0.75
SSR2-202ENST00000368311 TSPYL4Q9UJ04 414 aa10.36□□□□□ -0.75
SSR2-202ENST00000368311 TTC37Q6PGP7 1564 aa10.36□□□□□ -0.75
SSR2-202ENST00000368311 PTPRMP28827 1452 aa10.35□□□□□ -0.75
SSR2-202ENST00000368311 ANKRD36BQ8N2N9 1353 aa10.35□□□□□ -0.75
SSR2-202ENST00000368311 THRAP3Q9Y2W1 955 aaKnown RBP10.35□□□□□ -0.75
SSR2-202ENST00000368311 ZMYM4Q5VZL5 1548 aa10.35□□□□□ -0.75
SSR2-202ENST00000368311 FGD1P98174 961 aa10.35□□□□□ -0.75
SSR2-202ENST00000368311 TMOD2Q9NZR1 351 aa10.35□□□□□ -0.75
SSR2-202ENST00000368311 PDZRN3Q9UPQ7 1066 aa10.35□□□□□ -0.75
SSR2-202ENST00000368311 E9PSI1 815 aa10.34□□□□□ -0.75
SSR2-202ENST00000368311 IL2RBP14784 551 aa10.34□□□□□ -0.75
SSR2-202ENST00000368311 RIC3Q7Z5B4 369 aa10.34□□□□□ -0.75
SSR2-202ENST00000368311 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
SSR2-202ENST00000368311 NUTM2GQ5VZR2 741 aa10.34□□□□□ -0.75
SSR2-202ENST00000368311 KIAA1211Q6ZU35 1233 aa10.34□□□□□ -0.75
SSR2-202ENST00000368311 SALL2Q9Y467 1007 aaPredicted RBP10.34□□□□□ -0.75
SSR2-202ENST00000368311 C9orf78Q9NZ63 289 aaPredicted RBP10.34□□□□□ -0.75
SSR2-202ENST00000368311 PCDH11XQ9BZA7 1347 aa10.33□□□□□ -0.76
SSR2-202ENST00000368311 PCDH11YQ9BZA8 1340 aa10.33□□□□□ -0.76
SSR2-202ENST00000368311 DISP3Q9P2K9 1392 aa10.33□□□□□ -0.76
SSR2-202ENST00000368311 FAM196AQ6ZSG2 479 aa10.33□□□□□ -0.76
SSR2-202ENST00000368311 ISY1Q9ULR0 285 aaKnown RBP10.33□□□□□ -0.76
SSR2-202ENST00000368311 YTHDC2Q9H6S0 1430 aaKnown RBP10.33□□□□□ -0.76
SSR2-202ENST00000368311 ZC3H6P61129 1189 aaKnown RBP10.33□□□□□ -0.76
SSR2-202ENST00000368311 SLF2Q8IX21 1173 aa10.33□□□□□ -0.76
SSR2-202ENST00000368311 NYXQ9GZU5 481 aa10.33□□□□□ -0.76
SSR2-202ENST00000368311 TMEM94Q12767 1356 aa10.33□□□□□ -0.76
SSR2-202ENST00000368311 CT47B1P0C2W7 299 aaPredicted RBP10.33□□□□□ -0.76
SSR2-202ENST00000368311 TCP11L2Q8N4U5 519 aa10.33□□□□□ -0.76
SSR2-202ENST00000368311 ANKARQ7Z5J8 1434 aa10.33□□□□□ -0.76
SSR2-202ENST00000368311 ABCC11Q96J66 1382 aa10.32□□□□□ -0.76
SSR2-202ENST00000368311 SOGA3Q5TF21 947 aa10.32□□□□□ -0.76
SSR2-202ENST00000368311 PARP3Q9Y6F1 533 aa10.32□□□□□ -0.76
SSR2-202ENST00000368311 ZCRB1Q8TBF4 217 aaKnown RBP10.32□□□□□ -0.76
SSR2-202ENST00000368311 RFC4P35249 363 aa10.31□□□□□ -0.76
SSR2-202ENST00000368311 ZNF428Q96B54 188 aa10.31□□□□□ -0.76
SSR2-202ENST00000368311 MFAP1P55081 439 aaKnown RBP10.31□□□□□ -0.76
SSR2-202ENST00000368311 PLA2R1Q13018 1463 aa10.31□□□□□ -0.76
SSR2-202ENST00000368311 HTATSF1O43719 755 aaKnown RBP10.31□□□□□ -0.76
SSR2-202ENST00000368311 KIF16BQ96L93 1317 aa10.31□□□□□ -0.76
SSR2-202ENST00000368311 FCHSD2O94868 740 aa10.31□□□□□ -0.76
SSR2-202ENST00000368311 NCLP19338 710 aaKnown RBP10.31□□□□□ -0.76
SSR2-202ENST00000368311 GNAT3A8MTJ3 354 aa10.3□□□□□ -0.76
SSR2-202ENST00000368311 SLC3A2P08195 630 aaKnown RBP10.3□□□□□ -0.76
SSR2-202ENST00000368311 ACEP12821 1306 aa10.3□□□□□ -0.76
SSR2-202ENST00000368311 CCDC34Q96HJ3 373 aa10.3□□□□□ -0.76
SSR2-202ENST00000368311 RWDD1Q9H446 243 aaPredicted RBP10.3□□□□□ -0.76
SSR2-202ENST00000368311 RBM6P78332 1123 aaKnown RBP10.3□□□□□ -0.76
SSR2-202ENST00000368311 CCAR1Q8IX12 1150 aaKnown RBP10.3□□□□□ -0.76
SSR2-202ENST00000368311 GGNBP2Q9H3C7 697 aa10.3□□□□□ -0.76
SSR2-202ENST00000368311 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
SSR2-202ENST00000368311 ZFYVE9O95405 1425 aa10.3□□□□□ -0.76
SSR2-202ENST00000368311 PPP1R42Q7Z4L9 355 aa10.3□□□□□ -0.76
SSR2-202ENST00000368311 FAM135BQ49AJ0 1406 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 ERC1Q8IUD2 1116 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 CCDC136Q96JN2 1154 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 ANP32EQ9BTT0 268 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 ANKRD24Q8TF21 1146 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 FMNL2Q96PY5 1086 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 CCDC87Q9NVE4 849 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 DIP2AQ14689 1571 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 RIPK4P57078 832 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 SUPT20HQ8NEM7 779 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 FRAT1Q92837 279 aaPredicted RBP10.29□□□□□ -0.76
SSR2-202ENST00000368311 KIF3AQ9Y496 699 aa10.29□□□□□ -0.76
SSR2-202ENST00000368311 ABCC3O15438 1527 aa10.28□□□□□ -0.76
SSR2-202ENST00000368311 QTRT2Q9H974 415 aaKnown RBP10.28□□□□□ -0.76
SSR2-202ENST00000368311 SYNMO15061 1565 aa10.28□□□□□ -0.76
SSR2-202ENST00000368311 ERCC6L2Q5T890 1561 aa10.28□□□□□ -0.76
SSR2-202ENST00000368311 BLMP54132 1417 aaPredicted RBP10.28□□□□□ -0.76
SSR2-202ENST00000368311 WAPLQ7Z5K2 1190 aa10.28□□□□□ -0.76
SSR2-202ENST00000368311 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
SSR2-202ENST00000368311 SOS1Q07889 1333 aaPredicted RBP10.28□□□□□ -0.76
SSR2-202ENST00000368311 NF2P35240 595 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms