RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 CDK19Q9BWU1 502 aa15.62■□□□□ 0.09
PTPN7-202ENST00000367279 TBC1D2Q9BYX2 928 aa15.62■□□□□ 0.09
PTPN7-202ENST00000367279 NSD2O96028 1365 aa15.61■□□□□ 0.09
PTPN7-202ENST00000367279 TBC1D32Q96NH3 1257 aa15.61■□□□□ 0.09
PTPN7-202ENST00000367279 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.61■□□□□ 0.09
PTPN7-202ENST00000367279 ANO8Q9HCE9 1232 aaPredicted RBP15.61■□□□□ 0.09
PTPN7-202ENST00000367279 HECW2Q9P2P5 1572 aa15.61■□□□□ 0.09
PTPN7-202ENST00000367279 THUMPD2Q9BTF0 503 aaKnown RBP15.6■□□□□ 0.09
PTPN7-202ENST00000367279 ZC3H13Q5T200 1668 aaKnown RBP15.6■□□□□ 0.09
PTPN7-202ENST00000367279 MLH3Q9UHC1 1453 aa15.6■□□□□ 0.09
PTPN7-202ENST00000367279 PRKAR2BP31323 418 aa15.6■□□□□ 0.09
PTPN7-202ENST00000367279 MLECQ14165 292 aa15.6■□□□□ 0.09
PTPN7-202ENST00000367279 PLEKHF1Q96S99 279 aa15.6■□□□□ 0.09
PTPN7-202ENST00000367279 LNPKQ9C0E8 428 aa15.6■□□□□ 0.09
PTPN7-202ENST00000367279 C22orf23Q9BZE7 217 aa15.59■□□□□ 0.09
PTPN7-202ENST00000367279 GZF1Q9H116 711 aaPredicted RBP15.59■□□□□ 0.09
PTPN7-202ENST00000367279 WAPLQ7Z5K2 1190 aa15.58■□□□□ 0.09
PTPN7-202ENST00000367279 SLC52A1Q9NWF4 448 aa15.58■□□□□ 0.09
PTPN7-202ENST00000367279 ABCC11Q96J66 1382 aa15.58■□□□□ 0.08
PTPN7-202ENST00000367279 IPO8O15397 1037 aaKnown RBP15.58■□□□□ 0.08
PTPN7-202ENST00000367279 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.08
PTPN7-202ENST00000367279 CAMSAP1Q5T5Y3 1602 aa15.58■□□□□ 0.08
PTPN7-202ENST00000367279 PUS7Q96PZ0 661 aaKnown RBP15.56■□□□□ 0.08
PTPN7-202ENST00000367279 ARHGEF28Q8N1W1 1705 aaKnown RBP15.56■□□□□ 0.08
PTPN7-202ENST00000367279 ATAD2Q6PL18 1390 aa15.56■□□□□ 0.08
PTPN7-202ENST00000367279 SIGLEC1Q9BZZ2 1709 aa15.56■□□□□ 0.08
PTPN7-202ENST00000367279 PNNQ9H307 717 aaKnown RBP15.56■□□□□ 0.08
PTPN7-202ENST00000367279 CT47B1P0C2W7 299 aaPredicted RBP15.56■□□□□ 0.08
PTPN7-202ENST00000367279 NEXMIFQ5QGS0 1516 aa15.56■□□□□ 0.08
PTPN7-202ENST00000367279 VIRMAQ69YN4 1812 aaKnown RBP15.55■□□□□ 0.08
PTPN7-202ENST00000367279 YEATS2Q9ULM3 1422 aa15.54■□□□□ 0.08
PTPN7-202ENST00000367279 KIF16BQ96L93 1317 aa15.54■□□□□ 0.08
PTPN7-202ENST00000367279 ANKRD45Q5TZF3 282 aa15.53■□□□□ 0.08
PTPN7-202ENST00000367279 NLRP1Q9C000 1473 aa15.53■□□□□ 0.08
PTPN7-202ENST00000367279 HSCBQ8IWL3 235 aa15.53■□□□□ 0.08
PTPN7-202ENST00000367279 YTHDC2Q9H6S0 1430 aaKnown RBP15.53■□□□□ 0.08
PTPN7-202ENST00000367279 CFAP74Q9C0B2 1584 aa15.52■□□□□ 0.08
PTPN7-202ENST00000367279 HDAC1Q13547 482 aaPredicted RBP15.52■□□□□ 0.08
PTPN7-202ENST00000367279 PHACTR3Q96KR7 559 aa15.52■□□□□ 0.08
PTPN7-202ENST00000367279 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.08
PTPN7-202ENST00000367279 USP32Q8NFA0 1604 aa15.52■□□□□ 0.08
PTPN7-202ENST00000367279 ZRANB1Q9UGI0 708 aa15.51■□□□□ 0.07
PTPN7-202ENST00000367279 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
PTPN7-202ENST00000367279 ZBTB40Q9NUA8 1239 aa15.51■□□□□ 0.07
PTPN7-202ENST00000367279 ANTXR1Q9H6X2 564 aa15.51■□□□□ 0.07
PTPN7-202ENST00000367279 FCHSD2O94868 740 aa15.5■□□□□ 0.07
PTPN7-202ENST00000367279 HSP90AA1P07900 732 aaKnown RBP15.5■□□□□ 0.07
PTPN7-202ENST00000367279 POLKQ9UBT6 870 aa15.5■□□□□ 0.07
PTPN7-202ENST00000367279 CYB5RLQ6IPT4 315 aa15.5■□□□□ 0.07
PTPN7-202ENST00000367279 TSPYL6Q8N831 410 aa15.5■□□□□ 0.07
PTPN7-202ENST00000367279 MYO5BQ9ULV0 1848 aa15.5■□□□□ 0.07
PTPN7-202ENST00000367279 PIK3C2BO00750 1634 aa15.5■□□□□ 0.07
PTPN7-202ENST00000367279 NME9Q86XW9 330 aa15.49■□□□□ 0.07
PTPN7-202ENST00000367279 EIF5BO60841 1220 aaKnown RBP15.49■□□□□ 0.07
PTPN7-202ENST00000367279 IL16Q14005 1332 aa15.49■□□□□ 0.07
PTPN7-202ENST00000367279 SMC5Q8IY18 1101 aa15.49■□□□□ 0.07
PTPN7-202ENST00000367279 RRS1Q15050 365 aaKnown RBP15.48■□□□□ 0.07
PTPN7-202ENST00000367279 CHD1LQ86WJ1 897 aa15.48■□□□□ 0.07
PTPN7-202ENST00000367279 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
PTPN7-202ENST00000367279 SOX12O15370 315 aa15.48■□□□□ 0.07
PTPN7-202ENST00000367279 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
PTPN7-202ENST00000367279 ADGRB2O60241 1585 aa15.48■□□□□ 0.07
PTPN7-202ENST00000367279 NUTM2FA1L443 756 aa15.48■□□□□ 0.07
PTPN7-202ENST00000367279 HSP90AB1P08238 724 aaKnown RBP15.48■□□□□ 0.07
PTPN7-202ENST00000367279 DCTN1Q14203 1278 aa15.48■□□□□ 0.07
PTPN7-202ENST00000367279 DIP2CQ9Y2E4 1556 aa15.47■□□□□ 0.07
PTPN7-202ENST00000367279 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
PTPN7-202ENST00000367279 PTPRMP28827 1452 aa15.47■□□□□ 0.07
PTPN7-202ENST00000367279 FAM83GA6ND36 823 aa15.47■□□□□ 0.07
PTPN7-202ENST00000367279 NFE2L2Q16236 605 aa15.47■□□□□ 0.07
PTPN7-202ENST00000367279 CHMP5Q9NZZ3 219 aa15.47■□□□□ 0.07
PTPN7-202ENST00000367279 TXNDC2Q86VQ3 553 aa15.46■□□□□ 0.07
PTPN7-202ENST00000367279 MCM4P33991 863 aa15.46■□□□□ 0.07
PTPN7-202ENST00000367279 NUCB1Q02818 461 aa15.46■□□□□ 0.07
PTPN7-202ENST00000367279 COL3A1P02461 1466 aaPredicted RBP15.46■□□□□ 0.06
PTPN7-202ENST00000367279 APBB1O00213 710 aa15.46■□□□□ 0.06
PTPN7-202ENST00000367279 ALDH1L2Q3SY69 923 aa15.46■□□□□ 0.06
PTPN7-202ENST00000367279 NEO1Q92859 1461 aa15.45■□□□□ 0.06
PTPN7-202ENST00000367279 CD163L1Q9NR16 1453 aa15.45■□□□□ 0.06
PTPN7-202ENST00000367279 TWISTNBQ3B726 338 aaPredicted RBP15.44■□□□□ 0.06
PTPN7-202ENST00000367279 GNAI1P63096 354 aa15.44■□□□□ 0.06
PTPN7-202ENST00000367279 FAM69CQ0P6D2 419 aa15.44■□□□□ 0.06
PTPN7-202ENST00000367279 MBIPQ9NS73 344 aa15.44■□□□□ 0.06
PTPN7-202ENST00000367279 VAMP4O75379 141 aa15.44■□□□□ 0.06
PTPN7-202ENST00000367279 L1TD1Q5T7N2 865 aaKnown RBP15.44■□□□□ 0.06
PTPN7-202ENST00000367279 COG3Q96JB2 828 aa15.43■□□□□ 0.06
PTPN7-202ENST00000367279 GOLGA6L3A6NEY3 463 aa15.43■□□□□ 0.06
PTPN7-202ENST00000367279 CALD1Q05682 793 aaKnown RBP15.43■□□□□ 0.06
PTPN7-202ENST00000367279 MRPL50Q8N5N7 158 aaKnown RBP15.42■□□□□ 0.06
PTPN7-202ENST00000367279 ESF1Q9H501 851 aaKnown RBP15.42■□□□□ 0.06
PTPN7-202ENST00000367279 ARHGAP31Q2M1Z3 1444 aa15.42■□□□□ 0.06
PTPN7-202ENST00000367279 ZMYM3Q14202 1370 aa15.42■□□□□ 0.06
PTPN7-202ENST00000367279 LRRC7Q96NW7 1537 aa15.42■□□□□ 0.06
PTPN7-202ENST00000367279 ZBTB7BO15156 539 aaPredicted RBP15.42■□□□□ 0.06
PTPN7-202ENST00000367279 TRAK2O60296 914 aa15.42■□□□□ 0.06
PTPN7-202ENST00000367279 C8orf58Q8NAV2 365 aa15.42■□□□□ 0.06
PTPN7-202ENST00000367279 ZFYVE9O95405 1425 aa15.41■□□□□ 0.06
PTPN7-202ENST00000367279 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
PTPN7-202ENST00000367279 ALKQ9UM73 1620 aa15.4■□□□□ 0.06
PTPN7-202ENST00000367279 NUDT16Q96DE0 195 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms