RNA–Protein interactions for RNA: ENST00000366782.5

PSEN2-201, Transcript of presenilin 2, humanhuman

TSL 1 (best) BASIC

Gene PSEN2, Length 2,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-201ENST00000366782 PMFBP1Q8TBY8 1022 aa18.54■□□□□ 0.56
PSEN2-201ENST00000366782 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
PSEN2-201ENST00000366782 BRPF3Q9ULD4 1205 aa18.54■□□□□ 0.56
PSEN2-201ENST00000366782 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
PSEN2-201ENST00000366782 PDZRN3Q9UPQ7 1066 aa18.53■□□□□ 0.56
PSEN2-201ENST00000366782 YTHDC2Q9H6S0 1430 aaKnown RBP18.52■□□□□ 0.56
PSEN2-201ENST00000366782 EXOSC9Q06265 439 aaKnown RBP18.52■□□□□ 0.56
PSEN2-201ENST00000366782 MVPQ14764 893 aaKnown RBP18.51■□□□□ 0.55
PSEN2-201ENST00000366782 AAMPQ13685 434 aa18.51■□□□□ 0.55
PSEN2-201ENST00000366782 POGKQ9P215 609 aa18.5■□□□□ 0.55
PSEN2-201ENST00000366782 ANKRD26Q9UPS8 1709 aa18.5■□□□□ 0.55
PSEN2-201ENST00000366782 CLTCQ00610 1675 aaKnown RBP18.5■□□□□ 0.55
PSEN2-201ENST00000366782 ZKSCAN2Q63HK3 967 aa18.49■□□□□ 0.55
PSEN2-201ENST00000366782 ATAD2Q6PL18 1390 aa18.49■□□□□ 0.55
PSEN2-201ENST00000366782 FBLN1P23142 703 aa18.48■□□□□ 0.55
PSEN2-201ENST00000366782 DZIP1LQ8IYY4 767 aaKnown RBP18.48■□□□□ 0.55
PSEN2-201ENST00000366782 TERF2IPQ9NYB0 399 aa18.48■□□□□ 0.55
PSEN2-201ENST00000366782 SSH1Q8WYL5 1049 aa18.48■□□□□ 0.55
PSEN2-201ENST00000366782 CDK19Q9BWU1 502 aa18.48■□□□□ 0.55
PSEN2-201ENST00000366782 ALKQ9UM73 1620 aa18.48■□□□□ 0.55
PSEN2-201ENST00000366782 FRAT2O75474 233 aaPredicted RBP18.47■□□□□ 0.55
PSEN2-201ENST00000366782 TRIM27P14373 513 aa18.47■□□□□ 0.55
PSEN2-201ENST00000366782 CABP1Q9NZU7 370 aa18.47■□□□□ 0.55
PSEN2-201ENST00000366782 RWDD1Q9H446 243 aaPredicted RBP18.47■□□□□ 0.55
PSEN2-201ENST00000366782 SMC4Q9NTJ3 1288 aa18.47■□□□□ 0.55
PSEN2-201ENST00000366782 MED14O60244 1454 aa18.47■□□□□ 0.55
PSEN2-201ENST00000366782 ARHGEF40Q8TER5 1519 aa18.46■□□□□ 0.55
PSEN2-201ENST00000366782 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
PSEN2-201ENST00000366782 RIPK4P57078 832 aa18.45■□□□□ 0.54
PSEN2-201ENST00000366782 GSE1Q14687 1217 aa18.45■□□□□ 0.54
PSEN2-201ENST00000366782 CT47B1P0C2W7 299 aaPredicted RBP18.45■□□□□ 0.54
PSEN2-201ENST00000366782 FTSJ3Q8IY81 847 aaKnown RBP18.45■□□□□ 0.54
PSEN2-201ENST00000366782 DIAPH1O60610 1272 aaKnown RBP18.44■□□□□ 0.54
PSEN2-201ENST00000366782 NOB1Q9ULX3 412 aaKnown RBP18.43■□□□□ 0.54
PSEN2-201ENST00000366782 WAPLQ7Z5K2 1190 aa18.43■□□□□ 0.54
PSEN2-201ENST00000366782 ATF7IPQ6VMQ6 1270 aa18.42■□□□□ 0.54
PSEN2-201ENST00000366782 HDGFL2Q7Z4V5 671 aaPredicted RBP18.42■□□□□ 0.54
PSEN2-201ENST00000366782 KIF20BQ96Q89 1820 aa18.41■□□□□ 0.54
PSEN2-201ENST00000366782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.41■□□□□ 0.54
PSEN2-201ENST00000366782 IL16Q14005 1332 aa18.41■□□□□ 0.54
PSEN2-201ENST00000366782 ZMYM3Q14202 1370 aa18.41■□□□□ 0.54
PSEN2-201ENST00000366782 ITPRIPQ8IWB1 547 aa18.4■□□□□ 0.54
PSEN2-201ENST00000366782 TBC1D32Q96NH3 1257 aa18.4■□□□□ 0.54
PSEN2-201ENST00000366782 POLKQ9UBT6 870 aa18.4■□□□□ 0.54
PSEN2-201ENST00000366782 TMEM57Q8N5G2 664 aa18.39■□□□□ 0.53
PSEN2-201ENST00000366782 STAG3Q9UJ98 1225 aa18.39■□□□□ 0.53
PSEN2-201ENST00000366782 LRRC7Q96NW7 1537 aa18.38■□□□□ 0.53
PSEN2-201ENST00000366782 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
PSEN2-201ENST00000366782 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
PSEN2-201ENST00000366782 DDX19BQ9UMR2 479 aa18.37■□□□□ 0.53
PSEN2-201ENST00000366782 FCHSD2O94868 740 aa18.37■□□□□ 0.53
PSEN2-201ENST00000366782 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
PSEN2-201ENST00000366782 PHACTR3Q96KR7 559 aa18.37■□□□□ 0.53
PSEN2-201ENST00000366782 SLKQ9H2G2 1235 aaPredicted RBP18.36■□□□□ 0.53
PSEN2-201ENST00000366782 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
PSEN2-201ENST00000366782 A2ML1A8K2U0 1454 aa18.36■□□□□ 0.53
PSEN2-201ENST00000366782 CDC42BPGQ6DT37 1551 aa18.35■□□□□ 0.53
PSEN2-201ENST00000366782 MAP2P11137 1827 aaKnown RBP18.35■□□□□ 0.53
PSEN2-201ENST00000366782 ANTXR1Q9H6X2 564 aa18.35■□□□□ 0.53
PSEN2-201ENST00000366782 FAM135BQ49AJ0 1406 aa18.35■□□□□ 0.53
PSEN2-201ENST00000366782 SETD1AO15047 1707 aaKnown RBP18.35■□□□□ 0.53
PSEN2-201ENST00000366782 BECN1Q14457 450 aa18.34■□□□□ 0.53
PSEN2-201ENST00000366782 TBC1D2Q9BYX2 928 aa18.34■□□□□ 0.53
PSEN2-201ENST00000366782 HMOX1P09601 288 aa18.34■□□□□ 0.53
PSEN2-201ENST00000366782 THUMPD2Q9BTF0 503 aaKnown RBP18.34■□□□□ 0.53
PSEN2-201ENST00000366782 FAM69CQ0P6D2 419 aa18.33■□□□□ 0.53
PSEN2-201ENST00000366782 SMC5Q8IY18 1101 aa18.33■□□□□ 0.53
PSEN2-201ENST00000366782 ZRANB1Q9UGI0 708 aa18.33■□□□□ 0.53
PSEN2-201ENST00000366782 UBE2Q2Q8WVN8 375 aa18.33■□□□□ 0.52
PSEN2-201ENST00000366782 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
PSEN2-201ENST00000366782 PNNQ9H307 717 aaKnown RBP18.32■□□□□ 0.52
PSEN2-201ENST00000366782 UPF2Q9HAU5 1272 aaKnown RBP18.32■□□□□ 0.52
PSEN2-201ENST00000366782 DLC1Q96QB1 1528 aa18.32■□□□□ 0.52
PSEN2-201ENST00000366782 ATP7BP35670 1465 aa18.32■□□□□ 0.52
PSEN2-201ENST00000366782 RIMS2Q9UQ26 1411 aa18.31■□□□□ 0.52
PSEN2-201ENST00000366782 TSPOAP1O95153 1857 aa18.31■□□□□ 0.52
PSEN2-201ENST00000366782 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
PSEN2-201ENST00000366782 NME9Q86XW9 330 aa18.31■□□□□ 0.52
PSEN2-201ENST00000366782 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
PSEN2-201ENST00000366782 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
PSEN2-201ENST00000366782 TSPYL6Q8N831 410 aa18.3■□□□□ 0.52
PSEN2-201ENST00000366782 CPSF1Q10570 1443 aaKnown RBP18.29■□□□□ 0.52
PSEN2-201ENST00000366782 IPO8O15397 1037 aaKnown RBP18.29■□□□□ 0.52
PSEN2-201ENST00000366782 VAMP4O75379 141 aa18.29■□□□□ 0.52
PSEN2-201ENST00000366782 IL13P35225 146 aa18.29■□□□□ 0.52
PSEN2-201ENST00000366782 MFAP1P55081 439 aaKnown RBP18.29■□□□□ 0.52
PSEN2-201ENST00000366782 MLECQ14165 292 aa18.29■□□□□ 0.52
PSEN2-201ENST00000366782 NFE2L2Q16236 605 aa18.29■□□□□ 0.52
PSEN2-201ENST00000366782 SPATA31D1Q6ZQQ2 1576 aa18.29■□□□□ 0.52
PSEN2-201ENST00000366782 NRXN3Q9Y4C0 1643 aa18.28■□□□□ 0.52
PSEN2-201ENST00000366782 METP08581 1390 aa18.28■□□□□ 0.52
PSEN2-201ENST00000366782 WASLO00401 505 aaPredicted RBP18.27■□□□□ 0.52
PSEN2-201ENST00000366782 C22orf23Q9BZE7 217 aa18.27■□□□□ 0.52
PSEN2-201ENST00000366782 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
PSEN2-201ENST00000366782 BRPF1P55201 1214 aaPredicted RBP18.27■□□□□ 0.51
PSEN2-201ENST00000366782 SPRYD3Q8NCJ5 442 aa18.27■□□□□ 0.51
PSEN2-201ENST00000366782 AGLP35573 1532 aa18.27■□□□□ 0.51
PSEN2-201ENST00000366782 NUCB1Q02818 461 aa18.26■□□□□ 0.51
PSEN2-201ENST00000366782 TXNDC2Q86VQ3 553 aa18.26■□□□□ 0.51
PSEN2-201ENST00000366782 MRPL50Q8N5N7 158 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms