RNA–Protein interactions for RNA: ENST00000366704.1

OBSCN-202, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 2

Gene OBSCN, Length 2,534 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-202ENST00000366704 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
OBSCN-202ENST00000366704 TMPOP42166 694 aaKnown RBP18.53■□□□□ 0.56
OBSCN-202ENST00000366704 PMFBP1Q8TBY8 1022 aa18.53■□□□□ 0.56
OBSCN-202ENST00000366704 PCDHB15Q9Y5E8 787 aa18.53■□□□□ 0.56
OBSCN-202ENST00000366704 NLRP1Q9C000 1473 aa18.52■□□□□ 0.56
OBSCN-202ENST00000366704 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
OBSCN-202ENST00000366704 TSPOAP1O95153 1857 aa18.52■□□□□ 0.56
OBSCN-202ENST00000366704 VIRMAQ69YN4 1812 aaKnown RBP18.52■□□□□ 0.55
OBSCN-202ENST00000366704 MED14O60244 1454 aa18.5■□□□□ 0.55
OBSCN-202ENST00000366704 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
OBSCN-202ENST00000366704 ARHGEF40Q8TER5 1519 aa18.5■□□□□ 0.55
OBSCN-202ENST00000366704 EXOSC9Q06265 439 aaKnown RBP18.5■□□□□ 0.55
OBSCN-202ENST00000366704 AAMPQ13685 434 aa18.49■□□□□ 0.55
OBSCN-202ENST00000366704 FTSJ3Q8IY81 847 aaKnown RBP18.49■□□□□ 0.55
OBSCN-202ENST00000366704 DIAPH1O60610 1272 aaKnown RBP18.49■□□□□ 0.55
OBSCN-202ENST00000366704 ZKSCAN2Q63HK3 967 aa18.49■□□□□ 0.55
OBSCN-202ENST00000366704 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
OBSCN-202ENST00000366704 USP35Q9P2H5 1018 aa18.49■□□□□ 0.55
OBSCN-202ENST00000366704 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
OBSCN-202ENST00000366704 WAPLQ7Z5K2 1190 aa18.48■□□□□ 0.55
OBSCN-202ENST00000366704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
OBSCN-202ENST00000366704 SMC4Q9NTJ3 1288 aa18.48■□□□□ 0.55
OBSCN-202ENST00000366704 DIP2BQ9P265 1576 aa18.48■□□□□ 0.55
OBSCN-202ENST00000366704 MLECQ14165 292 aa18.48■□□□□ 0.55
OBSCN-202ENST00000366704 MVPQ14764 893 aaKnown RBP18.48■□□□□ 0.55
OBSCN-202ENST00000366704 RIPK4P57078 832 aa18.47■□□□□ 0.55
OBSCN-202ENST00000366704 DZIP1LQ8IYY4 767 aaKnown RBP18.47■□□□□ 0.55
OBSCN-202ENST00000366704 CT47B1P0C2W7 299 aaPredicted RBP18.46■□□□□ 0.55
OBSCN-202ENST00000366704 PDZRN3Q9UPQ7 1066 aa18.46■□□□□ 0.55
OBSCN-202ENST00000366704 A2ML1A8K2U0 1454 aa18.45■□□□□ 0.54
OBSCN-202ENST00000366704 SEC24BO95487 1268 aa18.45■□□□□ 0.54
OBSCN-202ENST00000366704 FBLN1P23142 703 aa18.45■□□□□ 0.54
OBSCN-202ENST00000366704 RIMS2Q9UQ26 1411 aa18.45■□□□□ 0.54
OBSCN-202ENST00000366704 RWDD1Q9H446 243 aaPredicted RBP18.45■□□□□ 0.54
OBSCN-202ENST00000366704 UBE2Q2Q8WVN8 375 aa18.44■□□□□ 0.54
OBSCN-202ENST00000366704 SSH1Q8WYL5 1049 aa18.44■□□□□ 0.54
OBSCN-202ENST00000366704 USP19O94966 1318 aa18.43■□□□□ 0.54
OBSCN-202ENST00000366704 PNPLA6Q8IY17 1366 aa18.43■□□□□ 0.54
OBSCN-202ENST00000366704 TRIM27P14373 513 aa18.43■□□□□ 0.54
OBSCN-202ENST00000366704 AGLP35573 1532 aa18.42■□□□□ 0.54
OBSCN-202ENST00000366704 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
OBSCN-202ENST00000366704 NFKBIBQ15653 356 aa18.42■□□□□ 0.54
OBSCN-202ENST00000366704 PNNQ9H307 717 aaKnown RBP18.42■□□□□ 0.54
OBSCN-202ENST00000366704 IL16Q14005 1332 aa18.42■□□□□ 0.54
OBSCN-202ENST00000366704 DLC1Q96QB1 1528 aa18.42■□□□□ 0.54
OBSCN-202ENST00000366704 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
OBSCN-202ENST00000366704 LRRC7Q96NW7 1537 aa18.41■□□□□ 0.54
OBSCN-202ENST00000366704 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
OBSCN-202ENST00000366704 ITPRIPQ8IWB1 547 aa18.41■□□□□ 0.54
OBSCN-202ENST00000366704 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
OBSCN-202ENST00000366704 NOB1Q9ULX3 412 aaKnown RBP18.4■□□□□ 0.54
OBSCN-202ENST00000366704 ATP7BP35670 1465 aa18.4■□□□□ 0.54
OBSCN-202ENST00000366704 PRKAR2BP31323 418 aa18.4■□□□□ 0.54
OBSCN-202ENST00000366704 ATF7IPQ6VMQ6 1270 aa18.4■□□□□ 0.54
OBSCN-202ENST00000366704 POLKQ9UBT6 870 aa18.4■□□□□ 0.54
OBSCN-202ENST00000366704 RTN4Q9NQC3 1192 aaKnown RBP18.39■□□□□ 0.53
OBSCN-202ENST00000366704 FCHSD2O94868 740 aa18.39■□□□□ 0.53
OBSCN-202ENST00000366704 RSPH6AQ9H0K4 717 aa18.38■□□□□ 0.53
OBSCN-202ENST00000366704 CDC42BPGQ6DT37 1551 aa18.37■□□□□ 0.53
OBSCN-202ENST00000366704 HMOX1P09601 288 aa18.37■□□□□ 0.53
OBSCN-202ENST00000366704 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.37■□□□□ 0.53
OBSCN-202ENST00000366704 DDX19BQ9UMR2 479 aa18.37■□□□□ 0.53
OBSCN-202ENST00000366704 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
OBSCN-202ENST00000366704 FAM135BQ49AJ0 1406 aa18.36■□□□□ 0.53
OBSCN-202ENST00000366704 PPIP5K1Q6PFW1 1433 aa18.36■□□□□ 0.53
OBSCN-202ENST00000366704 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
OBSCN-202ENST00000366704 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
OBSCN-202ENST00000366704 WASLO00401 505 aaPredicted RBP18.35■□□□□ 0.53
OBSCN-202ENST00000366704 TXNDC2Q86VQ3 553 aa18.35■□□□□ 0.53
OBSCN-202ENST00000366704 METP08581 1390 aa18.35■□□□□ 0.53
OBSCN-202ENST00000366704 NRXN3Q9Y4C0 1643 aa18.35■□□□□ 0.53
OBSCN-202ENST00000366704 ZMYM3Q14202 1370 aa18.35■□□□□ 0.53
OBSCN-202ENST00000366704 NME9Q86XW9 330 aa18.34■□□□□ 0.53
OBSCN-202ENST00000366704 UPF2Q9HAU5 1272 aaKnown RBP18.34■□□□□ 0.53
OBSCN-202ENST00000366704 ZRANB1Q9UGI0 708 aa18.34■□□□□ 0.53
OBSCN-202ENST00000366704 KIF16BQ96L93 1317 aa18.34■□□□□ 0.53
OBSCN-202ENST00000366704 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.53
OBSCN-202ENST00000366704 THUMPD2Q9BTF0 503 aaKnown RBP18.33■□□□□ 0.52
OBSCN-202ENST00000366704 EDC4Q6P2E9 1401 aaKnown RBP18.33■□□□□ 0.52
OBSCN-202ENST00000366704 NCKAP5LQ9HCH0 1330 aa18.33■□□□□ 0.52
OBSCN-202ENST00000366704 ESF1Q9H501 851 aaKnown RBP18.32■□□□□ 0.52
OBSCN-202ENST00000366704 CPSF1Q10570 1443 aaKnown RBP18.32■□□□□ 0.52
OBSCN-202ENST00000366704 IPO8O15397 1037 aaKnown RBP18.31■□□□□ 0.52
OBSCN-202ENST00000366704 HDAC1Q13547 482 aaPredicted RBP18.31■□□□□ 0.52
OBSCN-202ENST00000366704 BECN1Q14457 450 aa18.31■□□□□ 0.52
OBSCN-202ENST00000366704 NFE2L2Q16236 605 aa18.31■□□□□ 0.52
OBSCN-202ENST00000366704 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.31■□□□□ 0.52
OBSCN-202ENST00000366704 NUDT16Q96DE0 195 aaKnown RBP18.3■□□□□ 0.52
OBSCN-202ENST00000366704 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
OBSCN-202ENST00000366704 ALDH1L2Q3SY69 923 aa18.3■□□□□ 0.52
OBSCN-202ENST00000366704 TBC1D32Q96NH3 1257 aa18.29■□□□□ 0.52
OBSCN-202ENST00000366704 IL13P35225 146 aa18.29■□□□□ 0.52
OBSCN-202ENST00000366704 ZBTB40Q9NUA8 1239 aa18.29■□□□□ 0.52
OBSCN-202ENST00000366704 RRS1Q15050 365 aaKnown RBP18.28■□□□□ 0.52
OBSCN-202ENST00000366704 COG3Q96JB2 828 aa18.28■□□□□ 0.52
OBSCN-202ENST00000366704 CPS1P31327 1500 aa18.28■□□□□ 0.52
OBSCN-202ENST00000366704 CDK12Q9NYV4 1490 aaPredicted RBP18.28■□□□□ 0.52
OBSCN-202ENST00000366704 GSE1Q14687 1217 aa18.27■□□□□ 0.52
OBSCN-202ENST00000366704 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
OBSCN-202ENST00000366704 SMC5Q8IY18 1101 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms