RNA–Protein interactions for RNA: ENST00000357632.6

CCR9-202, Transcript of C-C motif chemokine receptor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR9, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-202ENST00000357632 USP54Q70EL1 1684 aa13.77□□□□□ -0.21
CCR9-202ENST00000357632 COG3Q96JB2 828 aa13.77□□□□□ -0.21
CCR9-202ENST00000357632 ACEP12821 1306 aa13.77□□□□□ -0.21
CCR9-202ENST00000357632 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
CCR9-202ENST00000357632 COL3A1P02461 1466 aaPredicted RBP13.76□□□□□ -0.21
CCR9-202ENST00000357632 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
CCR9-202ENST00000357632 RGPD8O14715 1765 aaPredicted RBP13.75□□□□□ -0.21
CCR9-202ENST00000357632 RUNDC1Q96C34 613 aa13.75□□□□□ -0.21
CCR9-202ENST00000357632 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
CCR9-202ENST00000357632 TTC21BQ7Z4L5 1316 aa13.75□□□□□ -0.21
CCR9-202ENST00000357632 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
CCR9-202ENST00000357632 TNNT2P45379 298 aaPredicted RBP13.74□□□□□ -0.21
CCR9-202ENST00000357632 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCR9-202ENST00000357632 NCKAP5LQ9HCH0 1330 aa13.73□□□□□ -0.21
CCR9-202ENST00000357632 OVOS2A0A0J9YW53 1432 aa13.72□□□□□ -0.21
CCR9-202ENST00000357632 OVOS2Q6IE36 1432 aa13.72□□□□□ -0.21
CCR9-202ENST00000357632 ZNF521Q96K83 1311 aa13.72□□□□□ -0.21
CCR9-202ENST00000357632 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
CCR9-202ENST00000357632 SUPT16HQ9Y5B9 1047 aaKnown RBP13.72□□□□□ -0.21
CCR9-202ENST00000357632 DCCP43146 1447 aa13.71□□□□□ -0.21
CCR9-202ENST00000357632 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
CCR9-202ENST00000357632 NGDNQ8NEJ9 315 aaKnown RBP13.71□□□□□ -0.21
CCR9-202ENST00000357632 IQSEC2Q5JU85 1478 aa13.71□□□□□ -0.21
CCR9-202ENST00000357632 RNF123Q5XPI4 1314 aa13.71□□□□□ -0.22
CCR9-202ENST00000357632 KIF1AQ12756 1690 aa13.7□□□□□ -0.22
CCR9-202ENST00000357632 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
CCR9-202ENST00000357632 NME9Q86XW9 330 aa13.7□□□□□ -0.22
CCR9-202ENST00000357632 POLKQ9UBT6 870 aa13.7□□□□□ -0.22
CCR9-202ENST00000357632 KIF24Q5T7B8 1368 aa13.69□□□□□ -0.22
CCR9-202ENST00000357632 FKBP8Q14318 412 aa13.69□□□□□ -0.22
CCR9-202ENST00000357632 APAF1O14727 1248 aa13.68□□□□□ -0.22
CCR9-202ENST00000357632 FCHSD2O94868 740 aa13.68□□□□□ -0.22
CCR9-202ENST00000357632 U2AF1L5P0DN76 240 aaPredicted RBP13.68□□□□□ -0.22
CCR9-202ENST00000357632 U2AF1Q01081 240 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCR9-202ENST00000357632 PELP1Q8IZL8 1130 aaKnown RBP13.68□□□□□ -0.22
CCR9-202ENST00000357632 PHF8Q9UPP1 1060 aa13.68□□□□□ -0.22
CCR9-202ENST00000357632 LMTK3Q96Q04 1460 aa13.67□□□□□ -0.22
CCR9-202ENST00000357632 KDM4FA0A1W2PPD8 638 aa13.67□□□□□ -0.22
CCR9-202ENST00000357632 E9PSI1 815 aa13.67□□□□□ -0.22
CCR9-202ENST00000357632 NEFMP07197 916 aa13.67□□□□□ -0.22
CCR9-202ENST00000357632 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
CCR9-202ENST00000357632 WDR63Q8IWG1 891 aa13.67□□□□□ -0.22
CCR9-202ENST00000357632 PIK3C2AO00443 1686 aa13.66□□□□□ -0.22
CCR9-202ENST00000357632 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
CCR9-202ENST00000357632 PHF23Q9BUL5 403 aaPredicted RBP13.66□□□□□ -0.22
CCR9-202ENST00000357632 CCDC146Q8IYE0 955 aa13.65□□□□□ -0.22
CCR9-202ENST00000357632 TRMT2AQ8IZ69 625 aaKnown RBP13.65□□□□□ -0.22
CCR9-202ENST00000357632 NUTM2FA1L443 756 aa13.65□□□□□ -0.22
CCR9-202ENST00000357632 SLFN5Q08AF3 891 aa13.65□□□□□ -0.22
CCR9-202ENST00000357632 C14orf37Q86TY3 774 aa13.65□□□□□ -0.22
CCR9-202ENST00000357632 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
CCR9-202ENST00000357632 MAPK8IP3Q9UPT6 1336 aa13.65□□□□□ -0.22
CCR9-202ENST00000357632 TCP11L2Q8N4U5 519 aa13.64□□□□□ -0.23
CCR9-202ENST00000357632 RCAN3Q9UKA8 241 aa13.64□□□□□ -0.23
CCR9-202ENST00000357632 STRCQ7RTU9 1775 aa13.64□□□□□ -0.23
CCR9-202ENST00000357632 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
CCR9-202ENST00000357632 U2SURPO15042 1029 aaKnown RBP13.63□□□□□ -0.23
CCR9-202ENST00000357632 PLEKHF1Q96S99 279 aa13.63□□□□□ -0.23
CCR9-202ENST00000357632 STRCP1A6NGW2 1772 aa13.63□□□□□ -0.23
CCR9-202ENST00000357632 MARF1Q9Y4F3 1742 aaKnown RBP13.62□□□□□ -0.23
CCR9-202ENST00000357632 IL13P35225 146 aa13.62□□□□□ -0.23
CCR9-202ENST00000357632 DUSP27Q5VZP5 1158 aa13.62□□□□□ -0.23
CCR9-202ENST00000357632 WWC1Q8IX03 1113 aa13.62□□□□□ -0.23
CCR9-202ENST00000357632 SBNO1A3KN83 1393 aa13.62□□□□□ -0.23
CCR9-202ENST00000357632 MST1RQ04912 1400 aa13.61□□□□□ -0.23
CCR9-202ENST00000357632 IL16Q14005 1332 aa13.61□□□□□ -0.23
CCR9-202ENST00000357632 CDCA7LQ96GN5 454 aa13.61□□□□□ -0.23
CCR9-202ENST00000357632 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
CCR9-202ENST00000357632 RTL1A6NKG5 1358 aa13.6□□□□□ -0.23
CCR9-202ENST00000357632 FLT4P35916 1363 aa13.6□□□□□ -0.23
CCR9-202ENST00000357632 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
CCR9-202ENST00000357632 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
CCR9-202ENST00000357632 PHRF1Q9P1Y6 1649 aaKnown RBP13.6□□□□□ -0.23
CCR9-202ENST00000357632 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
CCR9-202ENST00000357632 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
CCR9-202ENST00000357632 RGPD1P0DJD0 1748 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 ATF3P18847 181 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 PPP4R2Q9NY27 417 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 TMEM94Q12767 1356 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
CCR9-202ENST00000357632 NLRP6P59044 892 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 PSME1Q06323 249 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
CCR9-202ENST00000357632 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 MYH16Q9H6N6 1097 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 PEAK1Q9H792 1746 aa13.59□□□□□ -0.23
CCR9-202ENST00000357632 CT47B1P0C2W7 299 aaPredicted RBP13.58□□□□□ -0.24
CCR9-202ENST00000357632 TMPOP42166 694 aaKnown RBP13.58□□□□□ -0.24
CCR9-202ENST00000357632 RRP1P56182 461 aaKnown RBP13.58□□□□□ -0.24
CCR9-202ENST00000357632 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.24
CCR9-202ENST00000357632 TRPM3Q9HCF6 1732 aaPredicted RBP13.58□□□□□ -0.24
CCR9-202ENST00000357632 MSH6P52701 1360 aa13.58□□□□□ -0.24
CCR9-202ENST00000357632 LMOD3Q0VAK6 560 aa13.58□□□□□ -0.24
CCR9-202ENST00000357632 ABTB2Q8N961 1025 aa13.58□□□□□ -0.24
CCR9-202ENST00000357632 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
CCR9-202ENST00000357632 RRS1Q15050 365 aaKnown RBP13.57□□□□□ -0.24
CCR9-202ENST00000357632 SLIT3O75094 1523 aa13.56□□□□□ -0.24
CCR9-202ENST00000357632 HSPA2P54652 639 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms