RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 LRP6O75581 1613 aa19.19■□□□□ 0.66
USP6-202ENST00000357482 MS4A1P11836 297 aa19.17■□□□□ 0.66
USP6-202ENST00000357482 PNNQ9H307 717 aaKnown RBP19.17■□□□□ 0.66
USP6-202ENST00000357482 NAP1L5Q96NT1 182 aaPredicted RBP19.17■□□□□ 0.66
USP6-202ENST00000357482 SAFB2Q14151 953 aaKnown RBP eCLIP19.16■□□□□ 0.66
USP6-202ENST00000357482 L1TD1Q5T7N2 865 aaKnown RBP19.16■□□□□ 0.66
USP6-202ENST00000357482 POTEAQ6S8J7 498 aa19.16■□□□□ 0.66
USP6-202ENST00000357482 CLCN1P35523 988 aa19.15■□□□□ 0.66
USP6-202ENST00000357482 POGKQ9P215 609 aa19.15■□□□□ 0.66
USP6-202ENST00000357482 PRDM4Q9UKN5 801 aa19.15■□□□□ 0.66
USP6-202ENST00000357482 PRAM1Q96QH2 718 aa19.14■□□□□ 0.65
USP6-202ENST00000357482 BCL11BQ9C0K0 894 aaPredicted RBP19.14■□□□□ 0.65
USP6-202ENST00000357482 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
USP6-202ENST00000357482 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
USP6-202ENST00000357482 STAC3Q96MF2 364 aa19.12■□□□□ 0.65
USP6-202ENST00000357482 NPHP3Q7Z494 1330 aa19.12■□□□□ 0.65
USP6-202ENST00000357482 RRAGDQ9NQL2 400 aaPredicted RBP19.12■□□□□ 0.65
USP6-202ENST00000357482 TRAK1Q9UPV9 953 aa19.12■□□□□ 0.65
USP6-202ENST00000357482 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
USP6-202ENST00000357482 FOXO3O43524 673 aa19.11■□□□□ 0.65
USP6-202ENST00000357482 NCLP19338 710 aaKnown RBP19.11■□□□□ 0.65
USP6-202ENST00000357482 SOS2Q07890 1332 aaPredicted RBP19.11■□□□□ 0.65
USP6-202ENST00000357482 XPCQ01831 940 aaPredicted RBP19.1■□□□□ 0.65
USP6-202ENST00000357482 ZNF772Q68DY9 489 aaPredicted RBP19.1■□□□□ 0.65
USP6-202ENST00000357482 TPM2P07951 284 aa19.1■□□□□ 0.65
USP6-202ENST00000357482 FMN2Q9NZ56 1722 aa19.09■□□□□ 0.65
USP6-202ENST00000357482 RNF123Q5XPI4 1314 aa19.09■□□□□ 0.65
USP6-202ENST00000357482 ADGRB1O14514 1584 aa19.08■□□□□ 0.65
USP6-202ENST00000357482 DLC1Q96QB1 1528 aa19.08■□□□□ 0.64
USP6-202ENST00000357482 ADAMTS2O95450 1211 aa19.08■□□□□ 0.64
USP6-202ENST00000357482 C8orf37Q96NL8 207 aa19.08■□□□□ 0.64
USP6-202ENST00000357482 L3MBTL2Q969R5 705 aa19.06■□□□□ 0.64
USP6-202ENST00000357482 AFF2P51816 1311 aa19.06■□□□□ 0.64
USP6-202ENST00000357482 HIRIP3Q9BW71 556 aaPredicted RBP19.06■□□□□ 0.64
USP6-202ENST00000357482 BACH2Q9BYV9 841 aa19.05■□□□□ 0.64
USP6-202ENST00000357482 MINK1Q8N4C8 1332 aaPredicted RBP19.04■□□□□ 0.64
USP6-202ENST00000357482 KIF1AQ12756 1690 aa19.04■□□□□ 0.64
USP6-202ENST00000357482 PXDNQ92626 1479 aa19.04■□□□□ 0.64
USP6-202ENST00000357482 PDE4AP27815 886 aa19.04■□□□□ 0.64
USP6-202ENST00000357482 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
USP6-202ENST00000357482 PHF8Q9UPP1 1060 aa19.03■□□□□ 0.64
USP6-202ENST00000357482 SMG6Q86US8 1419 aaKnown RBP19.01■□□□□ 0.63
USP6-202ENST00000357482 NPM2Q86SE8 214 aaKnown RBP19.01■□□□□ 0.63
USP6-202ENST00000357482 RGPD8O14715 1765 aaPredicted RBP19.01■□□□□ 0.63
USP6-202ENST00000357482 RXRBP28702 533 aa19■□□□□ 0.63
USP6-202ENST00000357482 KRT28Q7Z3Y7 464 aa19■□□□□ 0.63
USP6-202ENST00000357482 MAP7D2Q96T17 732 aa19■□□□□ 0.63
USP6-202ENST00000357482 ADGRB2O60241 1585 aa18.99■□□□□ 0.63
USP6-202ENST00000357482 COL22A1Q8NFW1 1626 aaPredicted RBP18.98■□□□□ 0.63
USP6-202ENST00000357482 PSME1Q06323 249 aa18.98■□□□□ 0.63
USP6-202ENST00000357482 PMFBP1Q8TBY8 1022 aa18.98■□□□□ 0.63
USP6-202ENST00000357482 EIF3AQ14152 1382 aaKnown RBP18.98■□□□□ 0.63
USP6-202ENST00000357482 LMOD2Q6P5Q4 547 aa18.98■□□□□ 0.63
USP6-202ENST00000357482 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
USP6-202ENST00000357482 ARHGEF28Q8N1W1 1705 aaKnown RBP18.97■□□□□ 0.63
USP6-202ENST00000357482 ARXQ96QS3 562 aa18.96■□□□□ 0.63
USP6-202ENST00000357482 QTRT2Q9H974 415 aaKnown RBP18.96■□□□□ 0.63
USP6-202ENST00000357482 SPATA31A3Q5VYP0 1347 aa18.96■□□□□ 0.63
USP6-202ENST00000357482 WASLO00401 505 aaPredicted RBP18.96■□□□□ 0.63
USP6-202ENST00000357482 HAP1P54257 671 aaPredicted RBP18.96■□□□□ 0.63
USP6-202ENST00000357482 USP32Q8NFA0 1604 aa18.95■□□□□ 0.62
USP6-202ENST00000357482 KIAA1210Q9ULL0 1709 aa18.95■□□□□ 0.62
USP6-202ENST00000357482 NBPF1Q3BBV0 1214 aa18.94■□□□□ 0.62
USP6-202ENST00000357482 USP21Q9UK80 565 aa18.94■□□□□ 0.62
USP6-202ENST00000357482 NBPF8Q3BBV2 869 aa18.94■□□□□ 0.62
USP6-202ENST00000357482 TULP4Q9NRJ4 1543 aa18.93■□□□□ 0.62
USP6-202ENST00000357482 SMAP1Q8IYB5 467 aaPredicted RBP18.93■□□□□ 0.62
USP6-202ENST00000357482 TNS3Q68CZ2 1445 aa18.93■□□□□ 0.62
USP6-202ENST00000357482 PRR36Q9H6K5 1346 aa18.92■□□□□ 0.62
USP6-202ENST00000357482 GPRASP1Q5JY77 1395 aa18.91■□□□□ 0.62
USP6-202ENST00000357482 RBM6P78332 1123 aaKnown RBP18.91■□□□□ 0.62
USP6-202ENST00000357482 NGDNQ8NEJ9 315 aaKnown RBP18.91■□□□□ 0.62
USP6-202ENST00000357482 IPO4Q8TEX9 1081 aaKnown RBP18.9■□□□□ 0.62
USP6-202ENST00000357482 NAP1L2Q9ULW6 460 aaPredicted RBP18.9■□□□□ 0.62
USP6-202ENST00000357482 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
USP6-202ENST00000357482 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
USP6-202ENST00000357482 RGS3P49796 1198 aa18.89■□□□□ 0.61
USP6-202ENST00000357482 TRPC5Q9UL62 973 aaPredicted RBP18.89■□□□□ 0.61
USP6-202ENST00000357482 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
USP6-202ENST00000357482 FNBP4Q8N3X1 1017 aaPredicted RBP18.88■□□□□ 0.61
USP6-202ENST00000357482 CABLES1Q8TDN4 633 aa18.88■□□□□ 0.61
USP6-202ENST00000357482 BBXQ8WY36 941 aaPredicted RBP18.88■□□□□ 0.61
USP6-202ENST00000357482 CDK19Q9BWU1 502 aa18.88■□□□□ 0.61
USP6-202ENST00000357482 MARF1Q9Y4F3 1742 aaKnown RBP18.88■□□□□ 0.61
USP6-202ENST00000357482 NUDT16Q96DE0 195 aaKnown RBP18.88■□□□□ 0.61
USP6-202ENST00000357482 CDK12Q9NYV4 1490 aaPredicted RBP18.88■□□□□ 0.61
USP6-202ENST00000357482 CANXP27824 592 aaKnown RBP18.87■□□□□ 0.61
USP6-202ENST00000357482 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
USP6-202ENST00000357482 ITSN1Q15811 1721 aa18.86■□□□□ 0.61
USP6-202ENST00000357482 TERF1P54274 439 aa18.86■□□□□ 0.61
USP6-202ENST00000357482 CNGB1Q14028 1251 aaPredicted RBP18.86■□□□□ 0.61
USP6-202ENST00000357482 ATP7BP35670 1465 aa18.85■□□□□ 0.61
USP6-202ENST00000357482 RGS12O14924 1447 aa18.85■□□□□ 0.61
USP6-202ENST00000357482 SRPK2P78362 688 aaKnown RBP18.84■□□□□ 0.61
USP6-202ENST00000357482 UTP14CQ5TAP6 766 aaKnown RBP18.84■□□□□ 0.61
USP6-202ENST00000357482 MTERF4Q7Z6M4 381 aaKnown RBP18.84■□□□□ 0.61
USP6-202ENST00000357482 RALGAPBQ86X10 1494 aa18.83■□□□□ 0.61
USP6-202ENST00000357482 ROCK2O75116 1388 aaKnown RBP18.83■□□□□ 0.6
USP6-202ENST00000357482 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
USP6-202ENST00000357482 ATRNO75882 1429 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms