RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 CLTCL1P53675 1640 aa15.24■□□□□ 0.03
SIRPA-201ENST00000356025 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
SIRPA-201ENST00000356025 NUDT16Q96DE0 195 aaKnown RBP15.24■□□□□ 0.03
SIRPA-201ENST00000356025 IQGAP3Q86VI3 1631 aa15.23■□□□□ 0.03
SIRPA-201ENST00000356025 TRMT2AQ8IZ69 625 aaKnown RBP15.23■□□□□ 0.03
SIRPA-201ENST00000356025 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
SIRPA-201ENST00000356025 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
SIRPA-201ENST00000356025 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
SIRPA-201ENST00000356025 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
SIRPA-201ENST00000356025 FOXD4L6Q3SYB3 417 aaPredicted RBP15.21■□□□□ 0.03
SIRPA-201ENST00000356025 FOXD4L3Q6VB84 417 aaPredicted RBP15.21■□□□□ 0.03
SIRPA-201ENST00000356025 ANKRD36BQ8N2N9 1353 aa15.21■□□□□ 0.03
SIRPA-201ENST00000356025 TBC1D2Q9BYX2 928 aa15.21■□□□□ 0.03
SIRPA-201ENST00000356025 KIF16BQ96L93 1317 aa15.21■□□□□ 0.02
SIRPA-201ENST00000356025 UNC13BO14795 1591 aa15.2■□□□□ 0.02
SIRPA-201ENST00000356025 E9PCH4 1651 aa15.2■□□□□ 0.02
SIRPA-201ENST00000356025 TRPM2O94759 1503 aa15.2■□□□□ 0.02
SIRPA-201ENST00000356025 YEATS2Q9ULM3 1422 aa15.2■□□□□ 0.02
SIRPA-201ENST00000356025 POLR1AO95602 1720 aaPredicted RBP15.2■□□□□ 0.02
SIRPA-201ENST00000356025 HDGFP51858 240 aaKnown RBP15.19■□□□□ 0.02
SIRPA-201ENST00000356025 GNAI1P63096 354 aa15.19■□□□□ 0.02
SIRPA-201ENST00000356025 CALD1Q05682 793 aaKnown RBP15.19■□□□□ 0.02
SIRPA-201ENST00000356025 ATAD2Q6PL18 1390 aa15.19■□□□□ 0.02
SIRPA-201ENST00000356025 FCHSD2O94868 740 aa15.18■□□□□ 0.02
SIRPA-201ENST00000356025 SMARCA5O60264 1052 aaPredicted RBP15.18■□□□□ 0.02
SIRPA-201ENST00000356025 EIF2S2P20042 333 aaKnown RBP15.18■□□□□ 0.02
SIRPA-201ENST00000356025 NFE2L2Q16236 605 aa15.18■□□□□ 0.02
SIRPA-201ENST00000356025 C8orf58Q8NAV2 365 aa15.18■□□□□ 0.02
SIRPA-201ENST00000356025 NAP1L5Q96NT1 182 aaPredicted RBP15.17■□□□□ 0.02
SIRPA-201ENST00000356025 MBIPQ9NS73 344 aa15.17■□□□□ 0.02
SIRPA-201ENST00000356025 CCDC61Q9Y6R9 512 aa15.17■□□□□ 0.02
SIRPA-201ENST00000356025 PLXNC1O60486 1568 aa15.16■□□□□ 0.02
SIRPA-201ENST00000356025 NPC1L1Q9UHC9 1359 aa15.16■□□□□ 0.02
SIRPA-201ENST00000356025 F6X3S4 739 aa15.16■□□□□ 0.02
SIRPA-201ENST00000356025 HSP90AB2PQ58FF8 381 aa15.16■□□□□ 0.02
SIRPA-201ENST00000356025 CHD1LQ86WJ1 897 aa15.16■□□□□ 0.02
SIRPA-201ENST00000356025 WASLO00401 505 aaPredicted RBP15.16■□□□□ 0.02
SIRPA-201ENST00000356025 TRIM6-TRIM34B2RNG4 842 aa15.16■□□□□ 0.02
SIRPA-201ENST00000356025 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
SIRPA-201ENST00000356025 NLRP6P59044 892 aa15.15■□□□□ 0.02
SIRPA-201ENST00000356025 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
SIRPA-201ENST00000356025 MADDQ8WXG6 1647 aa15.15■□□□□ 0.02
SIRPA-201ENST00000356025 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
SIRPA-201ENST00000356025 INSRP06213 1382 aa15.14■□□□□ 0.01
SIRPA-201ENST00000356025 EID1Q9Y6B2 187 aa15.14■□□□□ 0.01
SIRPA-201ENST00000356025 FOXO3O43524 673 aa15.14■□□□□ 0.01
SIRPA-201ENST00000356025 C16orf71Q8IYS4 520 aaPredicted RBP15.14■□□□□ 0.01
SIRPA-201ENST00000356025 RILPL2Q969X0 211 aa15.14■□□□□ 0.01
SIRPA-201ENST00000356025 LMOD3Q0VAK6 560 aa15.13■□□□□ 0.01
SIRPA-201ENST00000356025 TSHZ3Q63HK5 1081 aa15.13■□□□□ 0.01
SIRPA-201ENST00000356025 USHBP1Q8N6Y0 703 aa15.13■□□□□ 0.01
SIRPA-201ENST00000356025 FKBP5Q13451 457 aaPredicted RBP15.13■□□□□ 0.01
SIRPA-201ENST00000356025 STK31Q9BXU1 1019 aa15.13■□□□□ 0.01
SIRPA-201ENST00000356025 KDM5AP29375 1690 aaKnown RBP15.13■□□□□ 0.01
SIRPA-201ENST00000356025 UHRF1BP1LA0JNW5 1464 aa15.12■□□□□ 0.01
SIRPA-201ENST00000356025 XPCQ01831 940 aaPredicted RBP15.12■□□□□ 0.01
SIRPA-201ENST00000356025 TBC1D32Q96NH3 1257 aa15.12■□□□□ 0.01
SIRPA-201ENST00000356025 POGZQ7Z3K3 1410 aa15.12■□□□□ 0.01
SIRPA-201ENST00000356025 OS9Q13438 667 aaPredicted RBP15.12■□□□□ 0.01
SIRPA-201ENST00000356025 CHMP4BQ9H444 224 aaKnown RBP15.12■□□□□ 0.01
SIRPA-201ENST00000356025 API5Q9BZZ5 524 aaKnown RBP15.11■□□□□ 0.01
SIRPA-201ENST00000356025 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
SIRPA-201ENST00000356025 SYNMO15061 1565 aa15.11■□□□□ 0.01
SIRPA-201ENST00000356025 CCDC27Q2M243 656 aa15.1■□□□□ 0.01
SIRPA-201ENST00000356025 CASC1Q6TDU7 716 aa15.1■□□□□ 0.01
SIRPA-201ENST00000356025 YTHDC2Q9H6S0 1430 aaKnown RBP15.1■□□□□ 0.01
SIRPA-201ENST00000356025 RSPH6AQ9H0K4 717 aa15.1■□□□□ 0.01
SIRPA-201ENST00000356025 VAMP4O75379 141 aa15.1■□□□□ 0.01
SIRPA-201ENST00000356025 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.1■□□□□ 0.01
SIRPA-201ENST00000356025 PLEKHF1Q96S99 279 aa15.1■□□□□ 0.01
SIRPA-201ENST00000356025 CHMP5Q9NZZ3 219 aa15.09■□□□□ 0.01
SIRPA-201ENST00000356025 ZBTB40Q9NUA8 1239 aa15.09■□□□□ 0.01
SIRPA-201ENST00000356025 EXOC6BQ9Y2D4 811 aa15.09■□□□□ 0.01
SIRPA-201ENST00000356025 SPHKAPQ2M3C7 1700 aa15.09■□□□□ 0.01
SIRPA-201ENST00000356025 TAOK2Q9UL54 1235 aa15.08■□□□□ 0
SIRPA-201ENST00000356025 NINLQ9Y2I6 1382 aa15.08■□□□□ 0
SIRPA-201ENST00000356025 TRIM44Q96DX7 344 aaPredicted RBP15.08■□□□□ 0
SIRPA-201ENST00000356025 GOLGA6L22H0YM25 854 aa15.07■□□□□ 0
SIRPA-201ENST00000356025 ACEP12821 1306 aa15.07■□□□□ 0
SIRPA-201ENST00000356025 TRAK2O60296 914 aa15.07■□□□□ 0
SIRPA-201ENST00000356025 ABTB2Q8N961 1025 aa15.07■□□□□ 0
SIRPA-201ENST00000356025 ABCA6Q8N139 1617 aa15.07■□□□□ 0
SIRPA-201ENST00000356025 MAP4K4O95819 1239 aaPredicted RBP15.07■□□□□ 0
SIRPA-201ENST00000356025 OTUD7AQ8TE49 926 aaPredicted RBP15.07■□□□□ 0
SIRPA-201ENST00000356025 CCDC9Q9Y3X0 531 aaKnown RBP15.06■□□□□ 0
SIRPA-201ENST00000356025 MAP3K4Q9Y6R4 1608 aa15.06■□□□□ 0
SIRPA-201ENST00000356025 USP19O94966 1318 aa15.06■□□□□ 0
SIRPA-201ENST00000356025 TET3O43151 1660 aa15.06■□□□□ 0
SIRPA-201ENST00000356025 ANP32BQ92688 251 aaKnown RBP15.05■□□□□ 0
SIRPA-201ENST00000356025 CT47B1P0C2W7 299 aaPredicted RBP15.05■□□□□ -0
SIRPA-201ENST00000356025 EIF4A2Q14240 407 aaKnown RBP15.05■□□□□ -0
SIRPA-201ENST00000356025 MRPL50Q8N5N7 158 aaKnown RBP15.05■□□□□ -0
SIRPA-201ENST00000356025 PPIP5K1Q6PFW1 1433 aa15.05■□□□□ -0
SIRPA-201ENST00000356025 MEIS3Q99687 375 aa15.05■□□□□ -0
SIRPA-201ENST00000356025 MCM4P33991 863 aa15.04■□□□□ -0
SIRPA-201ENST00000356025 AAMPQ13685 434 aa15.04■□□□□ -0
SIRPA-201ENST00000356025 A0A0G2JS52 829 aa15.04■□□□□ -0
SIRPA-201ENST00000356025 TBC1D9Q6ZT07 1266 aa15.04■□□□□ -0
SIRPA-201ENST00000356025 EFCAB6Q5THR3 1501 aa15.04■□□□□ -0
SIRPA-201ENST00000356025 KIF1BO60333 1816 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 333.1 ms