RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 CHD1LQ86WJ1 897 aa19.03■□□□□ 0.64
VAT1-201ENST00000355653 RBM42Q9BTD8 480 aaKnown RBP19.03■□□□□ 0.64
VAT1-201ENST00000355653 NOS1P29475 1434 aa19.03■□□□□ 0.64
VAT1-201ENST00000355653 INO80Q9ULG1 1556 aaPredicted RBP19.02■□□□□ 0.64
VAT1-201ENST00000355653 SSFA2P28290 1259 aa19.02■□□□□ 0.64
VAT1-201ENST00000355653 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
VAT1-201ENST00000355653 ANKRD45Q5TZF3 282 aa19.02■□□□□ 0.63
VAT1-201ENST00000355653 NASPP49321 788 aaPredicted RBP19.01■□□□□ 0.63
VAT1-201ENST00000355653 GGT6Q6P531 493 aa19.01■□□□□ 0.63
VAT1-201ENST00000355653 TRIM35Q9UPQ4 493 aa19.01■□□□□ 0.63
VAT1-201ENST00000355653 KIF2CQ99661 725 aa19.01■□□□□ 0.63
VAT1-201ENST00000355653 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
VAT1-201ENST00000355653 NUTM2DQ5VT03 806 aaPredicted RBP19■□□□□ 0.63
VAT1-201ENST00000355653 KIAA1211Q6ZU35 1233 aa19■□□□□ 0.63
VAT1-201ENST00000355653 ANP32BQ92688 251 aaKnown RBP19■□□□□ 0.63
VAT1-201ENST00000355653 K7ELQ4 463 aaPredicted RBP18.99■□□□□ 0.63
VAT1-201ENST00000355653 C1orf115Q9H7X2 142 aa18.99■□□□□ 0.63
VAT1-201ENST00000355653 DDX49Q9Y6V7 483 aaKnown RBP18.99■□□□□ 0.63
VAT1-201ENST00000355653 CD109Q6YHK3 1445 aa18.99■□□□□ 0.63
VAT1-201ENST00000355653 GOLGA6L22H0YM25 854 aa18.99■□□□□ 0.63
VAT1-201ENST00000355653 SAFB2Q14151 953 aaKnown RBP eCLIP18.99■□□□□ 0.63
VAT1-201ENST00000355653 KIF1BO60333 1816 aa18.99■□□□□ 0.63
VAT1-201ENST00000355653 MYO3AQ8NEV4 1616 aa18.98■□□□□ 0.63
VAT1-201ENST00000355653 IPO8O15397 1037 aaKnown RBP18.98■□□□□ 0.63
VAT1-201ENST00000355653 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
VAT1-201ENST00000355653 ABCA9Q8IUA7 1624 aa18.98■□□□□ 0.63
VAT1-201ENST00000355653 RIPK4P57078 832 aa18.98■□□□□ 0.63
VAT1-201ENST00000355653 CCDC173Q0VFZ6 552 aa18.98■□□□□ 0.63
VAT1-201ENST00000355653 BMP2KLQ5H9B9 411 aa18.98■□□□□ 0.63
VAT1-201ENST00000355653 GAS2L2Q8NHY3 880 aa18.98■□□□□ 0.63
VAT1-201ENST00000355653 TPM2P07951 284 aa18.97■□□□□ 0.63
VAT1-201ENST00000355653 PTMSP20962 102 aa18.97■□□□□ 0.63
VAT1-201ENST00000355653 KIF16BQ96L93 1317 aa18.97■□□□□ 0.63
VAT1-201ENST00000355653 QRICH2Q9H0J4 1663 aa18.97■□□□□ 0.63
VAT1-201ENST00000355653 NCLP19338 710 aaKnown RBP18.97■□□□□ 0.63
VAT1-201ENST00000355653 TBC1D9Q6ZT07 1266 aa18.97■□□□□ 0.63
VAT1-201ENST00000355653 MROH2AA6NES4 1674 aa18.97■□□□□ 0.63
VAT1-201ENST00000355653 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
VAT1-201ENST00000355653 CABP2Q9NPB3 220 aa18.96■□□□□ 0.63
VAT1-201ENST00000355653 GGNBP2Q9H3C7 697 aa18.96■□□□□ 0.63
VAT1-201ENST00000355653 ADGRB2O60241 1585 aa18.95■□□□□ 0.62
VAT1-201ENST00000355653 EFCAB6Q5THR3 1501 aa18.95■□□□□ 0.62
VAT1-201ENST00000355653 MSNP26038 577 aaKnown RBP18.95■□□□□ 0.62
VAT1-201ENST00000355653 C14orf93Q9H972 538 aaKnown RBP18.95■□□□□ 0.62
VAT1-201ENST00000355653 ASXL2Q76L83 1435 aa18.95■□□□□ 0.62
VAT1-201ENST00000355653 ABCC11Q96J66 1382 aa18.94■□□□□ 0.62
VAT1-201ENST00000355653 ZSCAN30Q86W11 494 aa18.94■□□□□ 0.62
VAT1-201ENST00000355653 PPRC1Q5VV67 1664 aaKnown RBP18.94■□□□□ 0.62
VAT1-201ENST00000355653 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
VAT1-201ENST00000355653 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
VAT1-201ENST00000355653 NRXN1Q9ULB1 1477 aa18.93■□□□□ 0.62
VAT1-201ENST00000355653 BAG4O95429 457 aaKnown RBP18.93■□□□□ 0.62
VAT1-201ENST00000355653 EVC2Q86UK5 1308 aa18.92■□□□□ 0.62
VAT1-201ENST00000355653 CFAP65Q6ZU64 1925 aaKnown RBP18.92■□□□□ 0.62
VAT1-201ENST00000355653 MCTP1Q6DN14 999 aa18.92■□□□□ 0.62
VAT1-201ENST00000355653 IFT172Q9UG01 1749 aa18.92■□□□□ 0.62
VAT1-201ENST00000355653 PPP1R9BQ96SB3 815 aa18.92■□□□□ 0.62
VAT1-201ENST00000355653 ANKRD36BQ8N2N9 1353 aa18.92■□□□□ 0.62
VAT1-201ENST00000355653 KLHL40Q2TBA0 621 aa18.91■□□□□ 0.62
VAT1-201ENST00000355653 AK9Q5TCS8 1911 aa18.91■□□□□ 0.62
VAT1-201ENST00000355653 RBM10P98175 930 aaKnown RBP18.91■□□□□ 0.62
VAT1-201ENST00000355653 NPATQ14207 1427 aa18.91■□□□□ 0.62
VAT1-201ENST00000355653 CAVIN1Q6NZI2 390 aaKnown RBP18.9■□□□□ 0.62
VAT1-201ENST00000355653 KIDINS220Q9ULH0 1771 aa18.9■□□□□ 0.62
VAT1-201ENST00000355653 CFAP74Q9C0B2 1584 aa18.9■□□□□ 0.62
VAT1-201ENST00000355653 USP32Q8NFA0 1604 aa18.9■□□□□ 0.62
VAT1-201ENST00000355653 PDCL3Q9H2J4 239 aa18.89■□□□□ 0.62
VAT1-201ENST00000355653 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.62
VAT1-201ENST00000355653 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
VAT1-201ENST00000355653 NSD2O96028 1365 aa18.89■□□□□ 0.61
VAT1-201ENST00000355653 GCC1Q96CN9 775 aa18.88■□□□□ 0.61
VAT1-201ENST00000355653 IL16Q14005 1332 aa18.88■□□□□ 0.61
VAT1-201ENST00000355653 SETBP1Q9Y6X0 1596 aa18.88■□□□□ 0.61
VAT1-201ENST00000355653 ELL2O00472 640 aaPredicted RBP18.87■□□□□ 0.61
VAT1-201ENST00000355653 ZBTB7BO15156 539 aaPredicted RBP18.87■□□□□ 0.61
VAT1-201ENST00000355653 ADGRB3O60242 1522 aa18.87■□□□□ 0.61
VAT1-201ENST00000355653 OFD1O75665 1012 aa18.87■□□□□ 0.61
VAT1-201ENST00000355653 SRPK2P78362 688 aaKnown RBP18.87■□□□□ 0.61
VAT1-201ENST00000355653 CALD1Q05682 793 aaKnown RBP18.87■□□□□ 0.61
VAT1-201ENST00000355653 ALDH1L2Q3SY69 923 aa18.87■□□□□ 0.61
VAT1-201ENST00000355653 CDC45O75419 566 aa18.87■□□□□ 0.61
VAT1-201ENST00000355653 R3HCC1Q9Y3T6 440 aaKnown RBP18.87■□□□□ 0.61
VAT1-201ENST00000355653 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.86■□□□□ 0.61
VAT1-201ENST00000355653 A0A1W2PP64 1363 aa18.86■□□□□ 0.61
VAT1-201ENST00000355653 ADGRB1O14514 1584 aa18.85■□□□□ 0.61
VAT1-201ENST00000355653 PKP1Q13835 747 aa18.85■□□□□ 0.61
VAT1-201ENST00000355653 ZSCAN23Q3MJ62 389 aa18.85■□□□□ 0.61
VAT1-201ENST00000355653 DIAPH1O60610 1272 aaKnown RBP18.85■□□□□ 0.61
VAT1-201ENST00000355653 THUMPD2Q9BTF0 503 aaKnown RBP18.85■□□□□ 0.61
VAT1-201ENST00000355653 STK26Q9P289 416 aa18.85■□□□□ 0.61
VAT1-201ENST00000355653 LMTK2Q8IWU2 1503 aa18.84■□□□□ 0.61
VAT1-201ENST00000355653 FAM13BQ9NYF5 915 aa18.84■□□□□ 0.61
VAT1-201ENST00000355653 NPM1P06748 294 aaKnown RBP eCLIP18.84■□□□□ 0.61
VAT1-201ENST00000355653 SIRT2Q8IXJ6 389 aa18.84■□□□□ 0.61
VAT1-201ENST00000355653 TULP4Q9NRJ4 1543 aa18.84■□□□□ 0.61
VAT1-201ENST00000355653 RBSNQ9H1K0 784 aa18.83■□□□□ 0.6
VAT1-201ENST00000355653 IBTKQ9P2D0 1353 aaPredicted RBP18.83■□□□□ 0.6
VAT1-201ENST00000355653 GSPT1P15170 499 aaKnown RBP18.82■□□□□ 0.6
VAT1-201ENST00000355653 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
VAT1-201ENST00000355653 CLEC17AQ6ZS10 378 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms