RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 RCAN3Q9UKA8 241 aa33.9■■■■□ 3.02
CLK2-201ENST00000355560 NRKQ7Z2Y5 1582 aa33.9■■■■□ 3.02
CLK2-201ENST00000355560 ACEP12821 1306 aa33.89■■■■□ 3.02
CLK2-201ENST00000355560 GOLGA2Q08379 1002 aa33.89■■■■□ 3.02
CLK2-201ENST00000355560 NGEFQ8N5V2 710 aa33.89■■■■□ 3.02
CLK2-201ENST00000355560 RUNDC1Q96C34 613 aa33.89■■■■□ 3.02
CLK2-201ENST00000355560 U2AF1L5P0DN76 240 aaPredicted RBP33.88■■■■□ 3.01
CLK2-201ENST00000355560 U2AF1Q01081 240 aaKnown RBP eCLIP33.88■■■■□ 3.01
CLK2-201ENST00000355560 IQSEC2Q5JU85 1478 aa33.87■■■■□ 3.01
CLK2-201ENST00000355560 NPHP4O75161 1426 aaPredicted RBP33.86■■■■□ 3.01
CLK2-201ENST00000355560 PNPLA6Q8IY17 1366 aa33.85■■■■□ 3.01
CLK2-201ENST00000355560 MAP2P11137 1827 aaKnown RBP33.85■■■■□ 3.01
CLK2-201ENST00000355560 RGPD8O14715 1765 aaPredicted RBP33.85■■■■□ 3.01
CLK2-201ENST00000355560 ZRANB1Q9UGI0 708 aa33.85■■■■□ 3.01
CLK2-201ENST00000355560 USP6P35125 1406 aa33.84■■■■□ 3.01
CLK2-201ENST00000355560 COG3Q96JB2 828 aa33.84■■■■□ 3.01
CLK2-201ENST00000355560 PELP1Q8IZL8 1130 aaKnown RBP33.83■■■■□ 3.01
CLK2-201ENST00000355560 FBLN1P23142 703 aa33.83■■■■□ 3.01
CLK2-201ENST00000355560 POLKQ9UBT6 870 aa33.83■■■■□ 3.01
CLK2-201ENST00000355560 DUSP27Q5VZP5 1158 aa33.82■■■■□ 3
CLK2-201ENST00000355560 U2SURPO15042 1029 aaKnown RBP33.81■■■■□ 3
CLK2-201ENST00000355560 TTC21BQ7Z4L5 1316 aa33.8■■■■□ 3
CLK2-201ENST00000355560 TCP11L2Q8N4U5 519 aa33.8■■■■□ 3
CLK2-201ENST00000355560 FMN2Q9NZ56 1722 aa33.8■■■■□ 3
CLK2-201ENST00000355560 NALCNQ8IZF0 1738 aa33.79■■■■□ 3
CLK2-201ENST00000355560 DIAPH1O60610 1272 aaKnown RBP33.79■■■■□ 3
CLK2-201ENST00000355560 ANKARQ7Z5J8 1434 aa33.79■■■■□ 3
CLK2-201ENST00000355560 AATKQ6ZMQ8 1374 aa33.79■■■■□ 3
CLK2-201ENST00000355560 PPM1GO15355 546 aaPredicted RBP33.79■■■■□ 3
CLK2-201ENST00000355560 RRP1P56182 461 aaKnown RBP33.79■■■■□ 3
CLK2-201ENST00000355560 SLFN5Q08AF3 891 aa33.79■■■■□ 3
CLK2-201ENST00000355560 PPP4R2Q9NY27 417 aa33.78■■■■□ 3
CLK2-201ENST00000355560 PMFBP1Q8TBY8 1022 aa33.77■■■■□ 3
CLK2-201ENST00000355560 RRP7AQ9Y3A4 280 aaKnown RBP33.76■■■■□ 3
CLK2-201ENST00000355560 WWC1Q8IX03 1113 aa33.76■■■□□ 2.99
CLK2-201ENST00000355560 NEUROD2Q15784 382 aa33.75■■■□□ 2.99
CLK2-201ENST00000355560 EMILIN1Q9Y6C2 1016 aa33.74■■■□□ 2.99
CLK2-201ENST00000355560 SPINK5Q9NQ38 1064 aaPredicted RBP33.74■■■□□ 2.99
CLK2-201ENST00000355560 CDK12Q9NYV4 1490 aaPredicted RBP33.74■■■□□ 2.99
CLK2-201ENST00000355560 SSH2Q76I76 1423 aa33.74■■■□□ 2.99
CLK2-201ENST00000355560 TRMT2AQ8IZ69 625 aaKnown RBP33.73■■■□□ 2.99
CLK2-201ENST00000355560 OVOS2A0A0J9YW53 1432 aa33.72■■■□□ 2.99
CLK2-201ENST00000355560 OVOS2Q6IE36 1432 aa33.72■■■□□ 2.99
CLK2-201ENST00000355560 E9PSI1 815 aa33.72■■■□□ 2.99
CLK2-201ENST00000355560 NGDNQ8NEJ9 315 aaKnown RBP33.72■■■□□ 2.99
CLK2-201ENST00000355560 DMRT2Q9Y5R5 561 aa33.72■■■□□ 2.99
CLK2-201ENST00000355560 RBM33Q96EV2 1170 aaKnown RBP33.69■■■□□ 2.98
CLK2-201ENST00000355560 PLEKHF1Q96S99 279 aa33.69■■■□□ 2.98
CLK2-201ENST00000355560 PHF23Q9BUL5 403 aaPredicted RBP33.69■■■□□ 2.98
CLK2-201ENST00000355560 RRS1Q15050 365 aaKnown RBP33.68■■■□□ 2.98
CLK2-201ENST00000355560 TTC21AQ8NDW8 1320 aa33.67■■■□□ 2.98
CLK2-201ENST00000355560 ADGRL3Q9HAR2 1447 aa33.67■■■□□ 2.98
CLK2-201ENST00000355560 CCDC27Q2M243 656 aa33.66■■■□□ 2.98
CLK2-201ENST00000355560 NWD1Q149M9 1564 aa33.66■■■□□ 2.98
CLK2-201ENST00000355560 MAPK8IP3Q9UPT6 1336 aa33.65■■■□□ 2.98
CLK2-201ENST00000355560 NCBP3Q53F19 620 aaKnown RBP33.65■■■□□ 2.98
CLK2-201ENST00000355560 LRRC7Q96NW7 1537 aa33.63■■■□□ 2.97
CLK2-201ENST00000355560 PNNQ9H307 717 aaKnown RBP33.62■■■□□ 2.97
CLK2-201ENST00000355560 B4GALNT3Q6L9W6 998 aa33.61■■■□□ 2.97
CLK2-201ENST00000355560 WDR63Q8IWG1 891 aa33.6■■■□□ 2.97
CLK2-201ENST00000355560 USP31Q70CQ4 1352 aa33.6■■■□□ 2.97
CLK2-201ENST00000355560 FCHSD2O94868 740 aa33.59■■■□□ 2.97
CLK2-201ENST00000355560 IL13P35225 146 aa33.59■■■□□ 2.97
CLK2-201ENST00000355560 PIK3C2AO00443 1686 aa33.59■■■□□ 2.97
CLK2-201ENST00000355560 TMPOP42166 694 aaKnown RBP33.57■■■□□ 2.96
CLK2-201ENST00000355560 PLIN1O60240 522 aa33.56■■■□□ 2.96
CLK2-201ENST00000355560 C14orf37Q86TY3 774 aa33.56■■■□□ 2.96
CLK2-201ENST00000355560 RSPH6AQ9H0K4 717 aa33.56■■■□□ 2.96
CLK2-201ENST00000355560 PRKAR2BP31323 418 aa33.53■■■□□ 2.96
CLK2-201ENST00000355560 PHF8Q9UPP1 1060 aa33.53■■■□□ 2.96
CLK2-201ENST00000355560 HMOX1P09601 288 aa33.52■■■□□ 2.96
CLK2-201ENST00000355560 SOX12O15370 315 aa33.52■■■□□ 2.96
CLK2-201ENST00000355560 PEAK1Q9H792 1746 aa33.51■■■□□ 2.96
CLK2-201ENST00000355560 NEFMP07197 916 aa33.5■■■□□ 2.95
CLK2-201ENST00000355560 EXOC6Q8TAG9 804 aa33.49■■■□□ 2.95
CLK2-201ENST00000355560 TRIM35Q9UPQ4 493 aa33.49■■■□□ 2.95
CLK2-201ENST00000355560 RIPK4P57078 832 aa33.47■■■□□ 2.95
CLK2-201ENST00000355560 PROSER2Q86WR7 435 aaPredicted RBP33.47■■■□□ 2.95
CLK2-201ENST00000355560 ESCO1Q5FWF5 840 aa33.46■■■□□ 2.95
CLK2-201ENST00000355560 CCDC136Q96JN2 1154 aa33.46■■■□□ 2.95
CLK2-201ENST00000355560 NLRP6P59044 892 aa33.46■■■□□ 2.95
CLK2-201ENST00000355560 MARF1Q9Y4F3 1742 aaKnown RBP33.46■■■□□ 2.95
CLK2-201ENST00000355560 USP54Q70EL1 1684 aa33.45■■■□□ 2.95
CLK2-201ENST00000355560 MYH16Q9H6N6 1097 aa33.45■■■□□ 2.95
CLK2-201ENST00000355560 EIF4A2Q14240 407 aaKnown RBP33.44■■■□□ 2.94
CLK2-201ENST00000355560 PAK3O75914 559 aaPredicted RBP33.44■■■□□ 2.94
CLK2-201ENST00000355560 HSPA2P54652 639 aa33.44■■■□□ 2.94
CLK2-201ENST00000355560 MAP3K19Q56UN5 1328 aa33.43■■■□□ 2.94
CLK2-201ENST00000355560 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.43■■■□□ 2.94
CLK2-201ENST00000355560 HSP90AB2PQ58FF8 381 aa33.42■■■□□ 2.94
CLK2-201ENST00000355560 ABTB2Q8N961 1025 aa33.42■■■□□ 2.94
CLK2-201ENST00000355560 PHACTR3Q96KR7 559 aa33.42■■■□□ 2.94
CLK2-201ENST00000355560 NUTM2GQ5VZR2 741 aa33.41■■■□□ 2.94
CLK2-201ENST00000355560 KDM4FA0A1W2PPD8 638 aa33.4■■■□□ 2.94
CLK2-201ENST00000355560 C20orf194Q5TEA3 1177 aa33.4■■■□□ 2.94
CLK2-201ENST00000355560 SBNO1A3KN83 1393 aa33.39■■■□□ 2.94
CLK2-201ENST00000355560 FLT4P35916 1363 aa33.39■■■□□ 2.94
CLK2-201ENST00000355560 BCAR3O75815 825 aa33.39■■■□□ 2.94
CLK2-201ENST00000355560 CRBNQ96SW2 442 aa33.38■■■□□ 2.93
CLK2-201ENST00000355560 NFE2L2Q16236 605 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms