RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 PTCD1O75127 700 aaKnown RBP11.97□□□□□ -0.49
GABPA-201ENST00000354828 HSP90AB4PQ58FF6 505 aa11.97□□□□□ -0.49
GABPA-201ENST00000354828 FYB1O15117 783 aa11.97□□□□□ -0.49
GABPA-201ENST00000354828 AKAP17AQ02040 695 aaKnown RBP11.97□□□□□ -0.49
GABPA-201ENST00000354828 SYNE3Q6ZMZ3 975 aa11.97□□□□□ -0.49
GABPA-201ENST00000354828 MPRIPQ6WCQ1 1025 aa11.96□□□□□ -0.49
GABPA-201ENST00000354828 ZNF428Q96B54 188 aa11.96□□□□□ -0.49
GABPA-201ENST00000354828 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
GABPA-201ENST00000354828 NME9Q86XW9 330 aa11.96□□□□□ -0.49
GABPA-201ENST00000354828 NOS1P29475 1434 aa11.96□□□□□ -0.49
GABPA-201ENST00000354828 BTBD11A6QL63 1104 aa11.96□□□□□ -0.5
GABPA-201ENST00000354828 STARD3NLO95772 234 aa11.96□□□□□ -0.5
GABPA-201ENST00000354828 CHRNA2Q15822 529 aa11.95□□□□□ -0.5
GABPA-201ENST00000354828 USHBP1Q8N6Y0 703 aa11.95□□□□□ -0.5
GABPA-201ENST00000354828 TRIM44Q96DX7 344 aaPredicted RBP11.95□□□□□ -0.5
GABPA-201ENST00000354828 BCL11BQ9C0K0 894 aaPredicted RBP11.95□□□□□ -0.5
GABPA-201ENST00000354828 CNNM1Q9NRU3 951 aa11.95□□□□□ -0.5
GABPA-201ENST00000354828 ITSN2Q9NZM3 1697 aa11.95□□□□□ -0.5
GABPA-201ENST00000354828 ZPR1O75312 459 aa11.94□□□□□ -0.5
GABPA-201ENST00000354828 TCEAL9Q9UHQ7 104 aa11.94□□□□□ -0.5
GABPA-201ENST00000354828 NPHP3Q7Z494 1330 aa11.94□□□□□ -0.5
GABPA-201ENST00000354828 GOLGA6L6A8MZA4 724 aa11.94□□□□□ -0.5
GABPA-201ENST00000354828 HTATSF1O43719 755 aaKnown RBP11.94□□□□□ -0.5
GABPA-201ENST00000354828 TWISTNBQ3B726 338 aaPredicted RBP11.94□□□□□ -0.5
GABPA-201ENST00000354828 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
GABPA-201ENST00000354828 RUFY2Q8WXA3 655 aa11.94□□□□□ -0.5
GABPA-201ENST00000354828 WASHC4Q2M389 1173 aa11.93□□□□□ -0.5
GABPA-201ENST00000354828 TRDNQ13061 729 aa11.93□□□□□ -0.5
GABPA-201ENST00000354828 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
GABPA-201ENST00000354828 KIF3AQ9Y496 699 aa11.92□□□□□ -0.5
GABPA-201ENST00000354828 NSD3Q9BZ95 1437 aa11.92□□□□□ -0.5
GABPA-201ENST00000354828 SLC4A2P04920 1241 aa11.92□□□□□ -0.5
GABPA-201ENST00000354828 CCDC34Q96HJ3 373 aa11.92□□□□□ -0.5
GABPA-201ENST00000354828 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
GABPA-201ENST00000354828 C19orf44Q9H6X5 657 aa11.92□□□□□ -0.5
GABPA-201ENST00000354828 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
GABPA-201ENST00000354828 PTPRKQ15262 1439 aa11.91□□□□□ -0.5
GABPA-201ENST00000354828 GNAT3A8MTJ3 354 aa11.91□□□□□ -0.5
GABPA-201ENST00000354828 GNAI3P08754 354 aa11.91□□□□□ -0.5
GABPA-201ENST00000354828 EXOSC9Q06265 439 aaKnown RBP11.91□□□□□ -0.5
GABPA-201ENST00000354828 ERICH6BQ5W0A0 696 aa11.91□□□□□ -0.5
GABPA-201ENST00000354828 SAMD9Q5K651 1589 aa11.91□□□□□ -0.5
GABPA-201ENST00000354828 NRDCO43847 1150 aa11.9□□□□□ -0.5
GABPA-201ENST00000354828 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
GABPA-201ENST00000354828 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
GABPA-201ENST00000354828 ERC2O15083 957 aa11.9□□□□□ -0.5
GABPA-201ENST00000354828 CPLX2Q6PUV4 134 aaKnown RBP11.9□□□□□ -0.5
GABPA-201ENST00000354828 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
GABPA-201ENST00000354828 ACEP12821 1306 aa11.9□□□□□ -0.5
GABPA-201ENST00000354828 UHRF1BP1Q6BDS2 1440 aa11.9□□□□□ -0.5
GABPA-201ENST00000354828 TBC1D2BQ9UPU7 963 aa11.9□□□□□ -0.5
GABPA-201ENST00000354828 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
GABPA-201ENST00000354828 ZBED9Q6R2W3 1325 aa11.9□□□□□ -0.5
GABPA-201ENST00000354828 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
GABPA-201ENST00000354828 SURF6O75683 361 aaKnown RBP11.89□□□□□ -0.51
GABPA-201ENST00000354828 RIMS2Q9UQ26 1411 aa11.89□□□□□ -0.51
GABPA-201ENST00000354828 RBM5P52756 815 aaKnown RBP eCLIP11.89□□□□□ -0.51
GABPA-201ENST00000354828 RRP1P56182 461 aaKnown RBP11.89□□□□□ -0.51
GABPA-201ENST00000354828 BRD4O60885 1362 aaPredicted RBP11.89□□□□□ -0.51
GABPA-201ENST00000354828 ZKSCAN1P17029 563 aaPredicted RBP11.89□□□□□ -0.51
GABPA-201ENST00000354828 ERICH2A1L162 156 aa11.89□□□□□ -0.51
GABPA-201ENST00000354828 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
GABPA-201ENST00000354828 ST18O60284 1047 aa11.88□□□□□ -0.51
GABPA-201ENST00000354828 FCHSD2O94868 740 aa11.88□□□□□ -0.51
GABPA-201ENST00000354828 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
GABPA-201ENST00000354828 AK7Q96M32 723 aa11.88□□□□□ -0.51
GABPA-201ENST00000354828 NFXL1Q6ZNB6 911 aa11.88□□□□□ -0.51
GABPA-201ENST00000354828 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
GABPA-201ENST00000354828 FAM184AQ8NB25 1140 aa11.88□□□□□ -0.51
GABPA-201ENST00000354828 EMILIN1Q9Y6C2 1016 aa11.88□□□□□ -0.51
GABPA-201ENST00000354828 IKQ13123 557 aaPredicted RBP11.87□□□□□ -0.51
GABPA-201ENST00000354828 CCDC57Q2TAC2 916 aa11.87□□□□□ -0.51
GABPA-201ENST00000354828 CHMP4CQ96CF2 233 aa11.87□□□□□ -0.51
GABPA-201ENST00000354828 CHD1O14646 1710 aa11.87□□□□□ -0.51
GABPA-201ENST00000354828 DNAJC5Q9H3Z4 198 aa11.87□□□□□ -0.51
GABPA-201ENST00000354828 MTMR7Q9Y216 660 aa11.87□□□□□ -0.51
GABPA-201ENST00000354828 TCOF1Q13428 1488 aaKnown RBP11.87□□□□□ -0.51
GABPA-201ENST00000354828 SF3A1Q15459 793 aaKnown RBP11.87□□□□□ -0.51
GABPA-201ENST00000354828 EXOC6Q8TAG9 804 aa11.87□□□□□ -0.51
GABPA-201ENST00000354828 NEO1Q92859 1461 aa11.87□□□□□ -0.51
GABPA-201ENST00000354828 H3BQV1 296 aa11.86□□□□□ -0.51
GABPA-201ENST00000354828 IFFO2Q5TF58 517 aa11.86□□□□□ -0.51
GABPA-201ENST00000354828 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
GABPA-201ENST00000354828 SRCIN1Q9C0H9 1055 aa11.86□□□□□ -0.51
GABPA-201ENST00000354828 ANKRD24Q8TF21 1146 aa11.86□□□□□ -0.51
GABPA-201ENST00000354828 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
GABPA-201ENST00000354828 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
GABPA-201ENST00000354828 ATP10AO60312 1499 aa11.86□□□□□ -0.51
GABPA-201ENST00000354828 CPLX1O14810 134 aa11.86□□□□□ -0.51
GABPA-201ENST00000354828 DNAJC2Q99543 621 aaKnown RBP11.86□□□□□ -0.51
GABPA-201ENST00000354828 MIS18AQ9NYP9 233 aa11.86□□□□□ -0.51
GABPA-201ENST00000354828 CENPQQ7L2Z9 268 aaPredicted RBP11.85□□□□□ -0.51
GABPA-201ENST00000354828 PANK1Q8TE04 598 aa11.85□□□□□ -0.51
GABPA-201ENST00000354828 PHF14O94880 888 aa11.85□□□□□ -0.51
GABPA-201ENST00000354828 KCNA6P17658 529 aa11.85□□□□□ -0.51
GABPA-201ENST00000354828 RNF20Q5VTR2 975 aa11.85□□□□□ -0.51
GABPA-201ENST00000354828 ANO2Q9NQ90 1003 aa11.85□□□□□ -0.51
GABPA-201ENST00000354828 MCM10Q7L590 875 aa11.85□□□□□ -0.51
GABPA-201ENST00000354828 ZNF219Q9P2Y4 722 aaPredicted RBP11.85□□□□□ -0.51
GABPA-201ENST00000354828 SHANK2Q9UPX8 1470 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms