RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 GAS2L2Q8NHY3 880 aa15.41■□□□□ 0.06
PCDHB11-201ENST00000354757 CHMP4AQ9BY43 222 aa15.41■□□□□ 0.06
PCDHB11-201ENST00000354757 KIF16BQ96L93 1317 aa15.4■□□□□ 0.06
PCDHB11-201ENST00000354757 GLIPR1L2Q4G1C9 344 aa15.4■□□□□ 0.06
PCDHB11-201ENST00000354757 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
PCDHB11-201ENST00000354757 HSP90AB2PQ58FF8 381 aa15.4■□□□□ 0.06
PCDHB11-201ENST00000354757 TTC37Q6PGP7 1564 aa15.39■□□□□ 0.05
PCDHB11-201ENST00000354757 FAM83GA6ND36 823 aa15.39■□□□□ 0.05
PCDHB11-201ENST00000354757 FCHSD2O94868 740 aa15.39■□□□□ 0.05
PCDHB11-201ENST00000354757 ANP32BQ92688 251 aaKnown RBP15.39■□□□□ 0.05
PCDHB11-201ENST00000354757 KIAA1211Q6ZU35 1233 aa15.39■□□□□ 0.05
PCDHB11-201ENST00000354757 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
PCDHB11-201ENST00000354757 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
PCDHB11-201ENST00000354757 CHRNA2Q15822 529 aa15.38■□□□□ 0.05
PCDHB11-201ENST00000354757 MEX3CQ5U5Q3 659 aaKnown RBP15.38■□□□□ 0.05
PCDHB11-201ENST00000354757 SLFN5Q08AF3 891 aa15.38■□□□□ 0.05
PCDHB11-201ENST00000354757 PLEKHO1Q53GL0 409 aaPredicted RBP15.38■□□□□ 0.05
PCDHB11-201ENST00000354757 HDGFL1Q5TGJ6 251 aa15.37■□□□□ 0.05
PCDHB11-201ENST00000354757 RIC3Q7Z5B4 369 aa15.36■□□□□ 0.05
PCDHB11-201ENST00000354757 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
PCDHB11-201ENST00000354757 PER1O15534 1290 aaPredicted RBP15.36■□□□□ 0.05
PCDHB11-201ENST00000354757 NFE2L2Q16236 605 aa15.36■□□□□ 0.05
PCDHB11-201ENST00000354757 SAMD9LQ8IVG5 1584 aa15.36■□□□□ 0.05
PCDHB11-201ENST00000354757 TATP17735 454 aaPredicted RBP15.36■□□□□ 0.05
PCDHB11-201ENST00000354757 NPATQ14207 1427 aa15.35■□□□□ 0.05
PCDHB11-201ENST00000354757 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
PCDHB11-201ENST00000354757 ARHGEF12Q9NZN5 1544 aa15.35■□□□□ 0.05
PCDHB11-201ENST00000354757 CABLES1Q8TDN4 633 aa15.35■□□□□ 0.05
PCDHB11-201ENST00000354757 GOLGA6L22H0YM25 854 aa15.34■□□□□ 0.05
PCDHB11-201ENST00000354757 AEBP1Q8IUX7 1158 aa15.34■□□□□ 0.05
PCDHB11-201ENST00000354757 MYL6BP14649 208 aa15.33■□□□□ 0.05
PCDHB11-201ENST00000354757 FAM161AQ3B820 660 aa15.33■□□□□ 0.05
PCDHB11-201ENST00000354757 KRT28Q7Z3Y7 464 aa15.33■□□□□ 0.05
PCDHB11-201ENST00000354757 WDR63Q8IWG1 891 aa15.33■□□□□ 0.05
PCDHB11-201ENST00000354757 LTKP29376 864 aa15.33■□□□□ 0.04
PCDHB11-201ENST00000354757 UHRF1BP1Q6BDS2 1440 aa15.33■□□□□ 0.04
PCDHB11-201ENST00000354757 MPRIPQ6WCQ1 1025 aa15.32■□□□□ 0.04
PCDHB11-201ENST00000354757 ATP10AO60312 1499 aa15.32■□□□□ 0.04
PCDHB11-201ENST00000354757 PTCD1O75127 700 aaKnown RBP15.32■□□□□ 0.04
PCDHB11-201ENST00000354757 MCCP23508 829 aa15.32■□□□□ 0.04
PCDHB11-201ENST00000354757 UGGT1Q9NYU2 1555 aa15.32■□□□□ 0.04
PCDHB11-201ENST00000354757 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
PCDHB11-201ENST00000354757 KAT6BQ8WYB5 2073 aa15.31■□□□□ 0.04
PCDHB11-201ENST00000354757 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
PCDHB11-201ENST00000354757 DDX58O95786 925 aaKnown RBP15.31■□□□□ 0.04
PCDHB11-201ENST00000354757 TTC21BQ7Z4L5 1316 aa15.31■□□□□ 0.04
PCDHB11-201ENST00000354757 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
PCDHB11-201ENST00000354757 FRAT2O75474 233 aaPredicted RBP15.3■□□□□ 0.04
PCDHB11-201ENST00000354757 CCDC30Q5VVM6 783 aa15.3■□□□□ 0.04
PCDHB11-201ENST00000354757 TSPOAP1O95153 1857 aa15.3■□□□□ 0.04
PCDHB11-201ENST00000354757 UBTFL1P0CB47 393 aaPredicted RBP15.3■□□□□ 0.04
PCDHB11-201ENST00000354757 HDAC5Q9UQL6 1122 aa15.3■□□□□ 0.04
PCDHB11-201ENST00000354757 FOXD4L5Q5VV16 416 aaPredicted RBP15.3■□□□□ 0.04
PCDHB11-201ENST00000354757 DUSP27Q5VZP5 1158 aa15.3■□□□□ 0.04
PCDHB11-201ENST00000354757 FOXD4L4Q8WXT5 416 aaPredicted RBP15.3■□□□□ 0.04
PCDHB11-201ENST00000354757 POLKQ9UBT6 870 aa15.29■□□□□ 0.04
PCDHB11-201ENST00000354757 PPIP5K1Q6PFW1 1433 aa15.29■□□□□ 0.04
PCDHB11-201ENST00000354757 NAP1L5Q96NT1 182 aaPredicted RBP15.29■□□□□ 0.04
PCDHB11-201ENST00000354757 GZF1Q9H116 711 aaPredicted RBP15.29■□□□□ 0.04
PCDHB11-201ENST00000354757 CABP4P57796 275 aa15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 A0A1W2PP64 1363 aa15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 KCNH5Q8NCM2 988 aa15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 ANKRD36BQ8N2N9 1353 aa15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 TMEM57Q8N5G2 664 aa15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 MAST1Q9Y2H9 1570 aa15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 YTHDC2Q9H6S0 1430 aaKnown RBP15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 ISY1Q9ULR0 285 aaKnown RBP15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 PDZRN3Q9UPQ7 1066 aa15.28■□□□□ 0.04
PCDHB11-201ENST00000354757 BTBD11A6QL63 1104 aa15.27■□□□□ 0.04
PCDHB11-201ENST00000354757 F6X3S4 739 aa15.27■□□□□ 0.04
PCDHB11-201ENST00000354757 GPATCH3Q96I76 525 aa15.27■□□□□ 0.04
PCDHB11-201ENST00000354757 GNAT3A8MTJ3 354 aa15.27■□□□□ 0.03
PCDHB11-201ENST00000354757 SURF6O75683 361 aaKnown RBP15.27■□□□□ 0.03
PCDHB11-201ENST00000354757 RARSP54136 660 aaKnown RBP15.27■□□□□ 0.03
PCDHB11-201ENST00000354757 PDE3AQ14432 1141 aa15.27■□□□□ 0.03
PCDHB11-201ENST00000354757 ORAI2Q96SN7 254 aa15.27■□□□□ 0.03
PCDHB11-201ENST00000354757 BRPF3Q9ULD4 1205 aa15.26■□□□□ 0.03
PCDHB11-201ENST00000354757 ANXA1P04083 346 aa15.26■□□□□ 0.03
PCDHB11-201ENST00000354757 PLCB2Q00722 1185 aa15.26■□□□□ 0.03
PCDHB11-201ENST00000354757 DDX17Q92841 729 aaKnown RBP15.26■□□□□ 0.03
PCDHB11-201ENST00000354757 FOXD4L6Q3SYB3 417 aaPredicted RBP15.26■□□□□ 0.03
PCDHB11-201ENST00000354757 FOXD4L3Q6VB84 417 aaPredicted RBP15.26■□□□□ 0.03
PCDHB11-201ENST00000354757 LRRC59Q96AG4 307 aaKnown RBP15.26■□□□□ 0.03
PCDHB11-201ENST00000354757 NEO1Q92859 1461 aa15.25■□□□□ 0.03
PCDHB11-201ENST00000354757 PARD3Q8TEW0 1356 aa15.25■□□□□ 0.03
PCDHB11-201ENST00000354757 IFIT2P09913 472 aaKnown RBP15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 PHACTR3Q96KR7 559 aa15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 NEUROD6Q96NK8 337 aa15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 PLEKHH1Q9ULM0 1364 aa15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 MVPQ14764 893 aaKnown RBP15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 G3BP1Q13283 466 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 GSE1Q14687 1217 aa15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 CCDC85AQ96PX6 553 aaPredicted RBP15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 SIL1Q9H173 461 aa15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 TOMM22Q9NS69 142 aa15.24■□□□□ 0.03
PCDHB11-201ENST00000354757 SPG7Q9UQ90 795 aa15.23■□□□□ 0.03
PCDHB11-201ENST00000354757 KRT24Q2M2I5 525 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms