RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PHF8Q9UPP1 1060 aa15.13■□□□□ 0.01
SMAD9-201ENST00000350148 NPHP1O15259 732 aa15.13■□□□□ 0.01
SMAD9-201ENST00000350148 ARHGAP31Q2M1Z3 1444 aa15.13■□□□□ 0.01
SMAD9-201ENST00000350148 SPATA31E1Q6ZUB1 1445 aa15.13■□□□□ 0.01
SMAD9-201ENST00000350148 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
SMAD9-201ENST00000350148 POLR3AO14802 1390 aaPredicted RBP15.12■□□□□ 0.01
SMAD9-201ENST00000350148 KIAA1211Q6ZU35 1233 aa15.12■□□□□ 0.01
SMAD9-201ENST00000350148 CCDC9Q9Y3X0 531 aaKnown RBP15.12■□□□□ 0.01
SMAD9-201ENST00000350148 SULT6B1Q6IMI4 303 aa15.12■□□□□ 0.01
SMAD9-201ENST00000350148 BCL2L13Q9BXK5 485 aa15.12■□□□□ 0.01
SMAD9-201ENST00000350148 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
SMAD9-201ENST00000350148 CCDC30Q5VVM6 783 aa15.12■□□□□ 0.01
SMAD9-201ENST00000350148 KCNJ4P48050 445 aa15.12■□□□□ 0.01
SMAD9-201ENST00000350148 CDCA7LQ96GN5 454 aa15.12■□□□□ 0.01
SMAD9-201ENST00000350148 CDC42BPBQ9Y5S2 1711 aa15.12■□□□□ 0.01
SMAD9-201ENST00000350148 ELL2O00472 640 aaPredicted RBP15.11■□□□□ 0.01
SMAD9-201ENST00000350148 ZFYVE9O95405 1425 aa15.11■□□□□ 0.01
SMAD9-201ENST00000350148 YEATS2Q9ULM3 1422 aa15.11■□□□□ 0.01
SMAD9-201ENST00000350148 NLRP2Q9NX02 1062 aa15.11■□□□□ 0.01
SMAD9-201ENST00000350148 TMPOP42166 694 aaKnown RBP15.11■□□□□ 0.01
SMAD9-201ENST00000350148 TATP17735 454 aaPredicted RBP15.11■□□□□ 0.01
SMAD9-201ENST00000350148 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
SMAD9-201ENST00000350148 LRRIQ1Q96JM4 1722 aa15.1■□□□□ 0.01
SMAD9-201ENST00000350148 PTMSP20962 102 aa15.09■□□□□ 0.01
SMAD9-201ENST00000350148 EXOSC9Q06265 439 aaKnown RBP15.09■□□□□ 0.01
SMAD9-201ENST00000350148 HSP90AB4PQ58FF6 505 aa15.09■□□□□ 0.01
SMAD9-201ENST00000350148 IL16Q14005 1332 aa15.09■□□□□ 0.01
SMAD9-201ENST00000350148 A0A0U1RQG5 324 aaPredicted RBP15.09■□□□□ 0.01
SMAD9-201ENST00000350148 NUTM2GQ5VZR2 741 aa15.09■□□□□ 0.01
SMAD9-201ENST00000350148 TWISTNBQ3B726 338 aaPredicted RBP15.08■□□□□ 0.01
SMAD9-201ENST00000350148 IPO9Q96P70 1041 aaKnown RBP15.08■□□□□ 0.01
SMAD9-201ENST00000350148 EFCAB6Q5THR3 1501 aa15.08■□□□□ 0.01
SMAD9-201ENST00000350148 PPIP5K1Q6PFW1 1433 aa15.08■□□□□ 0
SMAD9-201ENST00000350148 SPG7Q9UQ90 795 aa15.08■□□□□ 0
SMAD9-201ENST00000350148 NKTRP30414 1462 aaKnown RBP15.07■□□□□ 0
SMAD9-201ENST00000350148 IFT57Q9NWB7 429 aa15.07■□□□□ 0
SMAD9-201ENST00000350148 ABCC3O15438 1527 aa15.07■□□□□ 0
SMAD9-201ENST00000350148 KIF1BO60333 1816 aa15.07■□□□□ 0
SMAD9-201ENST00000350148 FKBP5Q13451 457 aaPredicted RBP15.07■□□□□ 0
SMAD9-201ENST00000350148 NME9Q86XW9 330 aa15.07■□□□□ 0
SMAD9-201ENST00000350148 GNAI3P08754 354 aa15.06■□□□□ 0
SMAD9-201ENST00000350148 TMEM2Q9UHN6 1383 aa15.05■□□□□ 0
SMAD9-201ENST00000350148 ALDH1L2Q3SY69 923 aa15.05■□□□□ 0
SMAD9-201ENST00000350148 ACEP12821 1306 aa15.05■□□□□ 0
SMAD9-201ENST00000350148 PDE4AP27815 886 aa15.05■□□□□ -0
SMAD9-201ENST00000350148 RRS1Q15050 365 aaKnown RBP15.05■□□□□ -0
SMAD9-201ENST00000350148 LMTK2Q8IWU2 1503 aa15.05■□□□□ -0
SMAD9-201ENST00000350148 PER1O15534 1290 aaPredicted RBP15.05■□□□□ -0
SMAD9-201ENST00000350148 AMOTQ4VCS5 1084 aa15.05■□□□□ -0
SMAD9-201ENST00000350148 TAF7LQ5H9L4 462 aa15.05■□□□□ -0
SMAD9-201ENST00000350148 CADPS2Q86UW7 1296 aa15.05■□□□□ -0
SMAD9-201ENST00000350148 KDM5CP41229 1560 aa15.04■□□□□ -0
SMAD9-201ENST00000350148 CCDC27Q2M243 656 aa15.04■□□□□ -0
SMAD9-201ENST00000350148 ANKRD45Q5TZF3 282 aa15.04■□□□□ -0
SMAD9-201ENST00000350148 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
SMAD9-201ENST00000350148 APBB1O00213 710 aa15.04■□□□□ -0
SMAD9-201ENST00000350148 EIF2S2P20042 333 aaKnown RBP15.04■□□□□ -0
SMAD9-201ENST00000350148 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
SMAD9-201ENST00000350148 FYB1O15117 783 aa15.03■□□□□ -0
SMAD9-201ENST00000350148 KDM5AP29375 1690 aaKnown RBP15.03■□□□□ -0
SMAD9-201ENST00000350148 ERVK-7P63135 1459 aa15.03■□□□□ -0
SMAD9-201ENST00000350148 CCT4P50991 539 aaKnown RBP15.03■□□□□ -0
SMAD9-201ENST00000350148 NLRP1Q9C000 1473 aa15.03■□□□□ -0
SMAD9-201ENST00000350148 FGD1P98174 961 aa15.03■□□□□ -0
SMAD9-201ENST00000350148 PRDM15P57071 1507 aaPredicted RBP15.02■□□□□ -0
SMAD9-201ENST00000350148 ZNF530Q6P9A1 599 aaPredicted RBP15.02□□□□□ -0.01
SMAD9-201ENST00000350148 ZNF330Q9Y3S2 320 aaPredicted RBP15.02□□□□□ -0.01
SMAD9-201ENST00000350148 GNAT3A8MTJ3 354 aa15.02□□□□□ -0.01
SMAD9-201ENST00000350148 ATF7IPQ6VMQ6 1270 aa15.02□□□□□ -0.01
SMAD9-201ENST00000350148 LRRFIP1Q32MZ4 808 aaKnown RBP15.01□□□□□ -0.01
SMAD9-201ENST00000350148 PANK1Q8TE04 598 aa15.01□□□□□ -0.01
SMAD9-201ENST00000350148 GCC1Q96CN9 775 aa15.01□□□□□ -0.01
SMAD9-201ENST00000350148 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
SMAD9-201ENST00000350148 SLC4A3P48751 1232 aa15.01□□□□□ -0.01
SMAD9-201ENST00000350148 GORABQ5T7V8 394 aa15.01□□□□□ -0.01
SMAD9-201ENST00000350148 EDC4Q6P2E9 1401 aaKnown RBP15□□□□□ -0.01
SMAD9-201ENST00000350148 TRIM6-TRIM34B2RNG4 842 aa15□□□□□ -0.01
SMAD9-201ENST00000350148 MVPQ14764 893 aaKnown RBP14.99□□□□□ -0.01
SMAD9-201ENST00000350148 CHMP3Q9Y3E7 222 aa14.99□□□□□ -0.01
SMAD9-201ENST00000350148 MFAP1P55081 439 aaKnown RBP14.99□□□□□ -0.01
SMAD9-201ENST00000350148 MSH6P52701 1360 aa14.99□□□□□ -0.01
SMAD9-201ENST00000350148 INO80Q9ULG1 1556 aaPredicted RBP14.99□□□□□ -0.01
SMAD9-201ENST00000350148 CHMP4CQ96CF2 233 aa14.99□□□□□ -0.01
SMAD9-201ENST00000350148 A0A1W2PP64 1363 aa14.98□□□□□ -0.01
SMAD9-201ENST00000350148 GLI2P10070 1586 aa14.98□□□□□ -0.01
SMAD9-201ENST00000350148 DNTTIP2Q5QJE6 756 aaKnown RBP14.98□□□□□ -0.01
SMAD9-201ENST00000350148 TSR2Q969E8 191 aaKnown RBP14.98□□□□□ -0.01
SMAD9-201ENST00000350148 NOB1Q9ULX3 412 aaKnown RBP14.98□□□□□ -0.01
SMAD9-201ENST00000350148 EMILIN1Q9Y6C2 1016 aa14.98□□□□□ -0.01
SMAD9-201ENST00000350148 PLEKHG1Q9ULL1 1385 aa14.98□□□□□ -0.01
SMAD9-201ENST00000350148 SPHKAPQ2M3C7 1700 aa14.98□□□□□ -0.01
SMAD9-201ENST00000350148 RUFY2Q8WXA3 655 aa14.98□□□□□ -0.01
SMAD9-201ENST00000350148 SYNMO15061 1565 aa14.98□□□□□ -0.01
SMAD9-201ENST00000350148 UBTFL1P0CB47 393 aaPredicted RBP14.97□□□□□ -0.01
SMAD9-201ENST00000350148 HSP90B1P14625 803 aaKnown RBP14.97□□□□□ -0.01
SMAD9-201ENST00000350148 HSP90AA2PQ14568 343 aaPredicted RBP14.97□□□□□ -0.01
SMAD9-201ENST00000350148 PRDM11Q9NQV5 511 aa14.97□□□□□ -0.01
SMAD9-201ENST00000350148 REC8O95072 547 aa14.97□□□□□ -0.01
SMAD9-201ENST00000350148 HMGB2P26583 209 aaKnown RBP14.97□□□□□ -0.01
SMAD9-201ENST00000350148 KRT28Q7Z3Y7 464 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms