RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ATF7IPQ6VMQ6 1270 aa23.01■■□□□ 1.27
PTP4A3-202ENST00000349124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.01■■□□□ 1.27
PTP4A3-202ENST00000349124 UPF2Q9HAU5 1272 aaKnown RBP23.01■■□□□ 1.27
PTP4A3-202ENST00000349124 PRKCSHP14314 528 aaPredicted RBP23■■□□□ 1.27
PTP4A3-202ENST00000349124 CAMSAP1Q5T5Y3 1602 aa23■■□□□ 1.27
PTP4A3-202ENST00000349124 CDK19Q9BWU1 502 aa23■■□□□ 1.27
PTP4A3-202ENST00000349124 ANTXR1Q9H6X2 564 aa23■■□□□ 1.27
PTP4A3-202ENST00000349124 ANO8Q9HCE9 1232 aaPredicted RBP22.99■■□□□ 1.27
PTP4A3-202ENST00000349124 TERF2IPQ9NYB0 399 aa22.99■■□□□ 1.27
PTP4A3-202ENST00000349124 DIAPH1O60610 1272 aaKnown RBP22.99■■□□□ 1.27
PTP4A3-202ENST00000349124 ARHGEF28Q8N1W1 1705 aaKnown RBP22.99■■□□□ 1.27
PTP4A3-202ENST00000349124 YEATS2Q9ULM3 1422 aa22.98■■□□□ 1.27
PTP4A3-202ENST00000349124 MFAP1P55081 439 aaKnown RBP22.98■■□□□ 1.27
PTP4A3-202ENST00000349124 SLC52A1Q9NWF4 448 aa22.98■■□□□ 1.27
PTP4A3-202ENST00000349124 USP32Q8NFA0 1604 aa22.98■■□□□ 1.27
PTP4A3-202ENST00000349124 NCBP3Q53F19 620 aaKnown RBP22.97■■□□□ 1.27
PTP4A3-202ENST00000349124 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
PTP4A3-202ENST00000349124 WAPLQ7Z5K2 1190 aa22.96■■□□□ 1.27
PTP4A3-202ENST00000349124 CD163L1Q9NR16 1453 aa22.95■■□□□ 1.26
PTP4A3-202ENST00000349124 DDX19BQ9UMR2 479 aa22.95■■□□□ 1.26
PTP4A3-202ENST00000349124 CT47B1P0C2W7 299 aaPredicted RBP22.94■■□□□ 1.26
PTP4A3-202ENST00000349124 COL3A1P02461 1466 aaPredicted RBP22.94■■□□□ 1.26
PTP4A3-202ENST00000349124 HMOX1P09601 288 aa22.94■■□□□ 1.26
PTP4A3-202ENST00000349124 HDAC1Q13547 482 aaPredicted RBP22.93■■□□□ 1.26
PTP4A3-202ENST00000349124 PHACTR3Q96KR7 559 aa22.93■■□□□ 1.26
PTP4A3-202ENST00000349124 ZBTB40Q9NUA8 1239 aa22.93■■□□□ 1.26
PTP4A3-202ENST00000349124 ADGRB2O60241 1585 aa22.93■■□□□ 1.26
PTP4A3-202ENST00000349124 PRKAR2BP31323 418 aa22.93■■□□□ 1.26
PTP4A3-202ENST00000349124 PIK3C2BO00750 1634 aa22.92■■□□□ 1.26
PTP4A3-202ENST00000349124 HDGFL2Q7Z4V5 671 aaPredicted RBP22.92■■□□□ 1.26
PTP4A3-202ENST00000349124 C22orf23Q9BZE7 217 aa22.92■■□□□ 1.26
PTP4A3-202ENST00000349124 PTPRMP28827 1452 aa22.92■■□□□ 1.26
PTP4A3-202ENST00000349124 ELL2O00472 640 aaPredicted RBP22.92■■□□□ 1.26
PTP4A3-202ENST00000349124 STAG3Q9UJ98 1225 aa22.91■■□□□ 1.26
PTP4A3-202ENST00000349124 ATAD2Q6PL18 1390 aa22.91■■□□□ 1.26
PTP4A3-202ENST00000349124 YTHDC2Q9H6S0 1430 aaKnown RBP22.91■■□□□ 1.26
PTP4A3-202ENST00000349124 POLKQ9UBT6 870 aa22.91■■□□□ 1.26
PTP4A3-202ENST00000349124 LNPKQ9C0E8 428 aa22.9■■□□□ 1.26
PTP4A3-202ENST00000349124 VIRMAQ69YN4 1812 aaKnown RBP22.9■■□□□ 1.26
PTP4A3-202ENST00000349124 SMC5Q8IY18 1101 aa22.89■■□□□ 1.26
PTP4A3-202ENST00000349124 ZRANB1Q9UGI0 708 aa22.89■■□□□ 1.25
PTP4A3-202ENST00000349124 DIP2CQ9Y2E4 1556 aa22.89■■□□□ 1.25
PTP4A3-202ENST00000349124 TSPYL6Q8N831 410 aa22.88■■□□□ 1.25
PTP4A3-202ENST00000349124 ARHGAP31Q2M1Z3 1444 aa22.88■■□□□ 1.25
PTP4A3-202ENST00000349124 C1orf115Q9H7X2 142 aa22.88■■□□□ 1.25
PTP4A3-202ENST00000349124 IL16Q14005 1332 aa22.88■■□□□ 1.25
PTP4A3-202ENST00000349124 ARXQ96QS3 562 aa22.88■■□□□ 1.25
PTP4A3-202ENST00000349124 ZFYVE9O95405 1425 aa22.87■■□□□ 1.25
PTP4A3-202ENST00000349124 RSPH6AQ9H0K4 717 aa22.87■■□□□ 1.25
PTP4A3-202ENST00000349124 EMILIN1Q9Y6C2 1016 aa22.87■■□□□ 1.25
PTP4A3-202ENST00000349124 PNPLA6Q8IY17 1366 aa22.86■■□□□ 1.25
PTP4A3-202ENST00000349124 FCHSD2O94868 740 aa22.86■■□□□ 1.25
PTP4A3-202ENST00000349124 NCKAP5LQ9HCH0 1330 aa22.84■■□□□ 1.25
PTP4A3-202ENST00000349124 ZMYM3Q14202 1370 aa22.84■■□□□ 1.25
PTP4A3-202ENST00000349124 IPO8O15397 1037 aaKnown RBP22.84■■□□□ 1.25
PTP4A3-202ENST00000349124 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.84■■□□□ 1.25
PTP4A3-202ENST00000349124 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
PTP4A3-202ENST00000349124 NEO1Q92859 1461 aa22.84■■□□□ 1.25
PTP4A3-202ENST00000349124 MYO5BQ9ULV0 1848 aa22.83■■□□□ 1.25
PTP4A3-202ENST00000349124 NUCB1Q02818 461 aa22.82■■□□□ 1.24
PTP4A3-202ENST00000349124 KIF16BQ96L93 1317 aa22.82■■□□□ 1.24
PTP4A3-202ENST00000349124 VAMP4O75379 141 aa22.81■■□□□ 1.24
PTP4A3-202ENST00000349124 NME9Q86XW9 330 aa22.81■■□□□ 1.24
PTP4A3-202ENST00000349124 GZF1Q9H116 711 aaPredicted RBP22.81■■□□□ 1.24
PTP4A3-202ENST00000349124 ARHGEF40Q8TER5 1519 aa22.8■■□□□ 1.24
PTP4A3-202ENST00000349124 MLECQ14165 292 aa22.8■■□□□ 1.24
PTP4A3-202ENST00000349124 PNNQ9H307 717 aaKnown RBP22.8■■□□□ 1.24
PTP4A3-202ENST00000349124 ZBTB7BO15156 539 aaPredicted RBP22.79■■□□□ 1.24
PTP4A3-202ENST00000349124 ALDH1L2Q3SY69 923 aa22.79■■□□□ 1.24
PTP4A3-202ENST00000349124 ANKRD45Q5TZF3 282 aa22.79■■□□□ 1.24
PTP4A3-202ENST00000349124 CHD1LQ86WJ1 897 aa22.79■■□□□ 1.24
PTP4A3-202ENST00000349124 TMEM131LA2VDJ0 1609 aa22.79■■□□□ 1.24
PTP4A3-202ENST00000349124 FAM83GA6ND36 823 aa22.78■■□□□ 1.24
PTP4A3-202ENST00000349124 NFE2L2Q16236 605 aa22.78■■□□□ 1.24
PTP4A3-202ENST00000349124 DCTN1Q14203 1278 aa22.77■■□□□ 1.24
PTP4A3-202ENST00000349124 RRS1Q15050 365 aaKnown RBP22.77■■□□□ 1.24
PTP4A3-202ENST00000349124 MRPL50Q8N5N7 158 aaKnown RBP22.77■■□□□ 1.24
PTP4A3-202ENST00000349124 MCM4P33991 863 aa22.77■■□□□ 1.24
PTP4A3-202ENST00000349124 CYB5RLQ6IPT4 315 aa22.76■■□□□ 1.23
PTP4A3-202ENST00000349124 MBIPQ9NS73 344 aa22.76■■□□□ 1.23
PTP4A3-202ENST00000349124 MED14O60244 1454 aa22.76■■□□□ 1.23
PTP4A3-202ENST00000349124 ALKQ9UM73 1620 aa22.76■■□□□ 1.23
PTP4A3-202ENST00000349124 SIRT2Q8IXJ6 389 aa22.76■■□□□ 1.23
PTP4A3-202ENST00000349124 IL13P35225 146 aa22.75■■□□□ 1.23
PTP4A3-202ENST00000349124 C8orf58Q8NAV2 365 aa22.75■■□□□ 1.23
PTP4A3-202ENST00000349124 LRRC7Q96NW7 1537 aa22.75■■□□□ 1.23
PTP4A3-202ENST00000349124 TXNDC2Q86VQ3 553 aa22.74■■□□□ 1.23
PTP4A3-202ENST00000349124 FAM135BQ49AJ0 1406 aa22.74■■□□□ 1.23
PTP4A3-202ENST00000349124 PPIP5K1Q6PFW1 1433 aa22.73■■□□□ 1.23
PTP4A3-202ENST00000349124 CHMP5Q9NZZ3 219 aa22.73■■□□□ 1.23
PTP4A3-202ENST00000349124 HSCBQ8IWL3 235 aa22.71■■□□□ 1.23
PTP4A3-202ENST00000349124 PREX1Q8TCU6 1659 aa22.71■■□□□ 1.23
PTP4A3-202ENST00000349124 ZNF692Q9BU19 519 aaPredicted RBP22.71■■□□□ 1.23
PTP4A3-202ENST00000349124 TWISTNBQ3B726 338 aaPredicted RBP22.7■■□□□ 1.22
PTP4A3-202ENST00000349124 FOXD4L1Q9NU39 408 aa22.7■■□□□ 1.22
PTP4A3-202ENST00000349124 RICTORQ6R327 1708 aa22.69■■□□□ 1.22
PTP4A3-202ENST00000349124 WASLO00401 505 aaPredicted RBP22.69■■□□□ 1.22
PTP4A3-202ENST00000349124 ZNF853P0CG23 659 aa22.69■■□□□ 1.22
PTP4A3-202ENST00000349124 FAM69CQ0P6D2 419 aa22.69■■□□□ 1.22
PTP4A3-202ENST00000349124 RBM42Q9BTD8 480 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms