RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 MED14O60244 1454 aa12.72□□□□□ -0.37
TRAPPC6B-202ENST00000347691 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRAPPC6B-202ENST00000347691 TRIM27P14373 513 aa12.71□□□□□ -0.37
TRAPPC6B-202ENST00000347691 NCOA3Q9Y6Q9 1424 aa12.71□□□□□ -0.37
TRAPPC6B-202ENST00000347691 TULP4Q9NRJ4 1543 aa12.71□□□□□ -0.37
TRAPPC6B-202ENST00000347691 VGFO15240 615 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC6B-202ENST00000347691 RBM25P49756 843 aaKnown RBP12.71□□□□□ -0.37
TRAPPC6B-202ENST00000347691 ALDH1L2Q3SY69 923 aa12.71□□□□□ -0.37
TRAPPC6B-202ENST00000347691 NPATQ14207 1427 aa12.71□□□□□ -0.37
TRAPPC6B-202ENST00000347691 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.38
TRAPPC6B-202ENST00000347691 EXOSC9Q06265 439 aaKnown RBP12.71□□□□□ -0.38
TRAPPC6B-202ENST00000347691 SKOR2Q2VWA4 1001 aaPredicted RBP12.71□□□□□ -0.38
TRAPPC6B-202ENST00000347691 HECW2Q9P2P5 1572 aa12.71□□□□□ -0.38
TRAPPC6B-202ENST00000347691 GBP4Q96PP9 640 aa12.7□□□□□ -0.38
TRAPPC6B-202ENST00000347691 CLCN1P35523 988 aa12.69□□□□□ -0.38
TRAPPC6B-202ENST00000347691 REREQ9P2R6 1566 aa12.69□□□□□ -0.38
TRAPPC6B-202ENST00000347691 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
TRAPPC6B-202ENST00000347691 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
TRAPPC6B-202ENST00000347691 RRAGDQ9NQL2 400 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC6B-202ENST00000347691 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
TRAPPC6B-202ENST00000347691 ATAD2Q6PL18 1390 aa12.68□□□□□ -0.38
TRAPPC6B-202ENST00000347691 NUCB1Q02818 461 aa12.68□□□□□ -0.38
TRAPPC6B-202ENST00000347691 ZBTB40Q9NUA8 1239 aa12.68□□□□□ -0.38
TRAPPC6B-202ENST00000347691 COL3A1P02461 1466 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC6B-202ENST00000347691 CAMSAP1Q5T5Y3 1602 aa12.68□□□□□ -0.38
TRAPPC6B-202ENST00000347691 TSR2Q969E8 191 aaKnown RBP12.68□□□□□ -0.38
TRAPPC6B-202ENST00000347691 PIK3C2BO00750 1634 aa12.68□□□□□ -0.38
TRAPPC6B-202ENST00000347691 MLH3Q9UHC1 1453 aa12.68□□□□□ -0.38
TRAPPC6B-202ENST00000347691 TERF2IPQ9NYB0 399 aa12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 SPRYD3Q8NCJ5 442 aa12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 NOB1Q9ULX3 412 aaKnown RBP12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 CD109Q6YHK3 1445 aa12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 ZFYVE9O95405 1425 aa12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 BMP2KLQ5H9B9 411 aa12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 TMEM132EQ6IEE7 984 aa12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 TRIM35Q9UPQ4 493 aa12.67□□□□□ -0.38
TRAPPC6B-202ENST00000347691 HSP90AB1P08238 724 aaKnown RBP12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 GCC1Q96CN9 775 aa12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 ABCC3O15438 1527 aa12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 TMEM57Q8N5G2 664 aa12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 GRPEL1Q9HAV7 217 aa12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 DDIT3P35638 169 aa12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 GZF1Q9H116 711 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC6B-202ENST00000347691 CHD1LQ86WJ1 897 aa12.65□□□□□ -0.38
TRAPPC6B-202ENST00000347691 A0A1W2PP64 1363 aa12.65□□□□□ -0.38
TRAPPC6B-202ENST00000347691 RIPK4P57078 832 aa12.65□□□□□ -0.38
TRAPPC6B-202ENST00000347691 PPIP5K1Q6PFW1 1433 aa12.65□□□□□ -0.39
TRAPPC6B-202ENST00000347691 ASXL2Q76L83 1435 aa12.65□□□□□ -0.39
TRAPPC6B-202ENST00000347691 POGZQ7Z3K3 1410 aa12.65□□□□□ -0.39
TRAPPC6B-202ENST00000347691 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
TRAPPC6B-202ENST00000347691 GLIPR1L2Q4G1C9 344 aa12.64□□□□□ -0.39
TRAPPC6B-202ENST00000347691 CLTCQ00610 1675 aaKnown RBP12.64□□□□□ -0.39
TRAPPC6B-202ENST00000347691 CFAP65Q6ZU64 1925 aaKnown RBP12.64□□□□□ -0.39
TRAPPC6B-202ENST00000347691 GOLGA6L22H0YM25 854 aa12.64□□□□□ -0.39
TRAPPC6B-202ENST00000347691 DIAPH1O60610 1272 aaKnown RBP12.64□□□□□ -0.39
TRAPPC6B-202ENST00000347691 ARHGAP45Q92619 1136 aa12.64□□□□□ -0.39
TRAPPC6B-202ENST00000347691 FRMPD1Q5SYB0 1578 aa12.63□□□□□ -0.39
TRAPPC6B-202ENST00000347691 FCHSD2O94868 740 aa12.63□□□□□ -0.39
TRAPPC6B-202ENST00000347691 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
TRAPPC6B-202ENST00000347691 TRIM44Q96DX7 344 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC6B-202ENST00000347691 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
TRAPPC6B-202ENST00000347691 HSP90AA1P07900 732 aaKnown RBP12.62□□□□□ -0.39
TRAPPC6B-202ENST00000347691 PNPLA6Q8IY17 1366 aa12.62□□□□□ -0.39
TRAPPC6B-202ENST00000347691 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
TRAPPC6B-202ENST00000347691 HDGFL2Q7Z4V5 671 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC6B-202ENST00000347691 NAP1L5Q96NT1 182 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC6B-202ENST00000347691 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
TRAPPC6B-202ENST00000347691 TNPO1Q92973 898 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6B-202ENST00000347691 ARXQ96QS3 562 aa12.61□□□□□ -0.39
TRAPPC6B-202ENST00000347691 KIF20BQ96Q89 1820 aa12.61□□□□□ -0.39
TRAPPC6B-202ENST00000347691 PIK3R4Q99570 1358 aa12.61□□□□□ -0.39
TRAPPC6B-202ENST00000347691 GGT6Q6P531 493 aa12.61□□□□□ -0.39
TRAPPC6B-202ENST00000347691 PANK2Q9BZ23 570 aa12.61□□□□□ -0.39
TRAPPC6B-202ENST00000347691 LNPKQ9C0E8 428 aa12.61□□□□□ -0.39
TRAPPC6B-202ENST00000347691 PTCH1Q13635 1447 aa12.6□□□□□ -0.39
TRAPPC6B-202ENST00000347691 K7ELQ4 463 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC6B-202ENST00000347691 ESPNB1AK53 854 aa12.6□□□□□ -0.39
TRAPPC6B-202ENST00000347691 ANP32BQ92688 251 aaKnown RBP12.6□□□□□ -0.39
TRAPPC6B-202ENST00000347691 GGNBP2Q9H3C7 697 aa12.6□□□□□ -0.39
TRAPPC6B-202ENST00000347691 SLC52A1Q9NWF4 448 aa12.59□□□□□ -0.39
TRAPPC6B-202ENST00000347691 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC6B-202ENST00000347691 FYB1O15117 783 aa12.59□□□□□ -0.39
TRAPPC6B-202ENST00000347691 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.39
TRAPPC6B-202ENST00000347691 KIF24Q5T7B8 1368 aa12.58□□□□□ -0.4
TRAPPC6B-202ENST00000347691 SIGLEC1Q9BZZ2 1709 aa12.58□□□□□ -0.4
TRAPPC6B-202ENST00000347691 FAM135BQ49AJ0 1406 aa12.58□□□□□ -0.4
TRAPPC6B-202ENST00000347691 CDC45O75419 566 aa12.58□□□□□ -0.4
TRAPPC6B-202ENST00000347691 GNAI1P63096 354 aa12.58□□□□□ -0.4
TRAPPC6B-202ENST00000347691 ANKRD45Q5TZF3 282 aa12.58□□□□□ -0.4
TRAPPC6B-202ENST00000347691 LRRC7Q96NW7 1537 aa12.57□□□□□ -0.4
TRAPPC6B-202ENST00000347691 PTPRMP28827 1452 aa12.57□□□□□ -0.4
TRAPPC6B-202ENST00000347691 LMOD3Q0VAK6 560 aa12.57□□□□□ -0.4
TRAPPC6B-202ENST00000347691 CCDC173Q0VFZ6 552 aa12.57□□□□□ -0.4
TRAPPC6B-202ENST00000347691 ZBTB7BO15156 539 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC6B-202ENST00000347691 RRP9O43818 475 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms