RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 QRICH2Q9H0J4 1663 aa12.53□□□□□ -0.4
ATG4A-202ENST00000345734 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.4
ATG4A-202ENST00000345734 MYBBP1AQ9BQG0 1328 aaKnown RBP12.52□□□□□ -0.4
ATG4A-202ENST00000345734 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
ATG4A-202ENST00000345734 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
ATG4A-202ENST00000345734 ASXL1Q8IXJ9 1541 aa12.51□□□□□ -0.41
ATG4A-202ENST00000345734 A2ML1A8K2U0 1454 aa12.5□□□□□ -0.41
ATG4A-202ENST00000345734 SBNO2Q9Y2G9 1366 aa12.5□□□□□ -0.41
ATG4A-202ENST00000345734 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
ATG4A-202ENST00000345734 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
ATG4A-202ENST00000345734 BRD4O60885 1362 aaPredicted RBP12.48□□□□□ -0.41
ATG4A-202ENST00000345734 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
ATG4A-202ENST00000345734 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
ATG4A-202ENST00000345734 STK26Q9P289 416 aa12.47□□□□□ -0.41
ATG4A-202ENST00000345734 KNSTRNQ9Y448 316 aa12.47□□□□□ -0.41
ATG4A-202ENST00000345734 RIMS2Q9UQ26 1411 aa12.47□□□□□ -0.41
ATG4A-202ENST00000345734 NLRP13Q86W25 1043 aa12.47□□□□□ -0.41
ATG4A-202ENST00000345734 ZC3H15Q8WU90 426 aaKnown RBP12.47□□□□□ -0.41
ATG4A-202ENST00000345734 CRISPLD2Q9H0B8 497 aa12.47□□□□□ -0.41
ATG4A-202ENST00000345734 ALKQ9UM73 1620 aa12.47□□□□□ -0.41
ATG4A-202ENST00000345734 PDE4AP27815 886 aa12.46□□□□□ -0.41
ATG4A-202ENST00000345734 TESPA1A2RU30 521 aaPredicted RBP12.46□□□□□ -0.42
ATG4A-202ENST00000345734 TNRQ92752 1358 aa12.45□□□□□ -0.42
ATG4A-202ENST00000345734 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
ATG4A-202ENST00000345734 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
ATG4A-202ENST00000345734 YTHDC2Q9H6S0 1430 aaKnown RBP12.44□□□□□ -0.42
ATG4A-202ENST00000345734 SENP3-EIF4A1A0A087X0R7 540 aa12.44□□□□□ -0.42
ATG4A-202ENST00000345734 CEBPAP49715 358 aaPredicted RBP12.44□□□□□ -0.42
ATG4A-202ENST00000345734 TULP4Q9NRJ4 1543 aa12.44□□□□□ -0.42
ATG4A-202ENST00000345734 CARD14Q9BXL6 1004 aa12.43□□□□□ -0.42
ATG4A-202ENST00000345734 PTPRMP28827 1452 aa12.43□□□□□ -0.42
ATG4A-202ENST00000345734 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
ATG4A-202ENST00000345734 LRPPRCP42704 1394 aaKnown RBP12.43□□□□□ -0.42
ATG4A-202ENST00000345734 UBR1Q8IWV7 1749 aa12.42□□□□□ -0.42
ATG4A-202ENST00000345734 TTLL13PA6NNM8 815 aa12.42□□□□□ -0.42
ATG4A-202ENST00000345734 SLC12A5Q9H2X9 1139 aa12.42□□□□□ -0.42
ATG4A-202ENST00000345734 SLC24A3Q9HC58 644 aa12.42□□□□□ -0.42
ATG4A-202ENST00000345734 SUPT16HQ9Y5B9 1047 aaKnown RBP12.42□□□□□ -0.42
ATG4A-202ENST00000345734 FER1L4A9Z1Z3 1794 aa12.42□□□□□ -0.42
ATG4A-202ENST00000345734 NRXN3Q9Y4C0 1643 aa12.41□□□□□ -0.42
ATG4A-202ENST00000345734 MFSD10Q14728 455 aa12.41□□□□□ -0.42
ATG4A-202ENST00000345734 C3P01024 1663 aa12.41□□□□□ -0.42
ATG4A-202ENST00000345734 PRAM1Q96QH2 718 aa12.41□□□□□ -0.42
ATG4A-202ENST00000345734 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
ATG4A-202ENST00000345734 EVC2Q86UK5 1308 aa12.41□□□□□ -0.42
ATG4A-202ENST00000345734 PPP2R1AP30153 589 aa12.4□□□□□ -0.42
ATG4A-202ENST00000345734 BRPF1P55201 1214 aaPredicted RBP12.4□□□□□ -0.42
ATG4A-202ENST00000345734 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.43
ATG4A-202ENST00000345734 MINK1Q8N4C8 1332 aaPredicted RBP12.39□□□□□ -0.43
ATG4A-202ENST00000345734 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
ATG4A-202ENST00000345734 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.39□□□□□ -0.43
ATG4A-202ENST00000345734 POGKQ9P215 609 aa12.39□□□□□ -0.43
ATG4A-202ENST00000345734 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
ATG4A-202ENST00000345734 NSD3Q9BZ95 1437 aa12.38□□□□□ -0.43
ATG4A-202ENST00000345734 BMP2KQ9NSY1 1161 aaPredicted RBP12.38□□□□□ -0.43
ATG4A-202ENST00000345734 TMEM2Q9UHN6 1383 aa12.37□□□□□ -0.43
ATG4A-202ENST00000345734 GALR2O43603 387 aaPredicted RBP12.37□□□□□ -0.43
ATG4A-202ENST00000345734 TMEM132AQ24JP5 1023 aa12.37□□□□□ -0.43
ATG4A-202ENST00000345734 METP08581 1390 aa12.37□□□□□ -0.43
ATG4A-202ENST00000345734 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
ATG4A-202ENST00000345734 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
ATG4A-202ENST00000345734 WAPLQ7Z5K2 1190 aa12.36□□□□□ -0.43
ATG4A-202ENST00000345734 NLRP1Q9C000 1473 aa12.36□□□□□ -0.43
ATG4A-202ENST00000345734 PLEKHH1Q9ULM0 1364 aa12.36□□□□□ -0.43
ATG4A-202ENST00000345734 MLLT3P42568 568 aaPredicted RBP12.35□□□□□ -0.43
ATG4A-202ENST00000345734 SRPK2P78362 688 aaKnown RBP12.35□□□□□ -0.43
ATG4A-202ENST00000345734 DLC1Q96QB1 1528 aa12.35□□□□□ -0.43
ATG4A-202ENST00000345734 HDGFP51858 240 aaKnown RBP12.35□□□□□ -0.43
ATG4A-202ENST00000345734 LTKP29376 864 aa12.34□□□□□ -0.43
ATG4A-202ENST00000345734 NEUROD2Q15784 382 aa12.34□□□□□ -0.43
ATG4A-202ENST00000345734 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
ATG4A-202ENST00000345734 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
ATG4A-202ENST00000345734 ABCC11Q96J66 1382 aa12.33□□□□□ -0.43
ATG4A-202ENST00000345734 NEFLP07196 543 aa12.33□□□□□ -0.44
ATG4A-202ENST00000345734 RBM26Q5T8P6 1007 aaKnown RBP12.33□□□□□ -0.44
ATG4A-202ENST00000345734 CDK19Q9BWU1 502 aa12.33□□□□□ -0.44
ATG4A-202ENST00000345734 ANKRD36BQ8N2N9 1353 aa12.33□□□□□ -0.44
ATG4A-202ENST00000345734 USP32Q8NFA0 1604 aa12.32□□□□□ -0.44
ATG4A-202ENST00000345734 TIE1P35590 1138 aa12.32□□□□□ -0.44
ATG4A-202ENST00000345734 CAMK2BQ13554 666 aa12.32□□□□□ -0.44
ATG4A-202ENST00000345734 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
ATG4A-202ENST00000345734 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
ATG4A-202ENST00000345734 TXNDC2Q86VQ3 553 aa12.32□□□□□ -0.44
ATG4A-202ENST00000345734 ADAMTS8Q9UP79 889 aa12.32□□□□□ -0.44
ATG4A-202ENST00000345734 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
ATG4A-202ENST00000345734 KNDC1Q76NI1 1749 aa12.31□□□□□ -0.44
ATG4A-202ENST00000345734 ADAMTS13Q76LX8 1427 aa12.31□□□□□ -0.44
ATG4A-202ENST00000345734 SMG6Q86US8 1419 aaKnown RBP12.31□□□□□ -0.44
ATG4A-202ENST00000345734 ATAD2Q6PL18 1390 aa12.31□□□□□ -0.44
ATG4A-202ENST00000345734 DPYSL4O14531 572 aa12.31□□□□□ -0.44
ATG4A-202ENST00000345734 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
ATG4A-202ENST00000345734 RIMS1Q86UR5 1692 aaKnown RBP12.3□□□□□ -0.44
ATG4A-202ENST00000345734 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
ATG4A-202ENST00000345734 CGNL1Q0VF96 1302 aa12.3□□□□□ -0.44
ATG4A-202ENST00000345734 INSRP06213 1382 aa12.3□□□□□ -0.44
ATG4A-202ENST00000345734 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
ATG4A-202ENST00000345734 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
ATG4A-202ENST00000345734 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
ATG4A-202ENST00000345734 NUDCQ9Y266 331 aa12.29□□□□□ -0.44
ATG4A-202ENST00000345734 CD163L1Q9NR16 1453 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms