RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 NLRP1Q9C000 1473 aa19.18■□□□□ 0.66
VIPAS39-202ENST00000343765 DIAPH1O60610 1272 aaKnown RBP19.17■□□□□ 0.66
VIPAS39-202ENST00000343765 PPP6R1Q9UPN7 881 aa19.17■□□□□ 0.66
VIPAS39-202ENST00000343765 AGLP35573 1532 aa19.17■□□□□ 0.66
VIPAS39-202ENST00000343765 COL3A1P02461 1466 aaPredicted RBP19.17■□□□□ 0.66
VIPAS39-202ENST00000343765 TRIM35Q9UPQ4 493 aa19.15■□□□□ 0.66
VIPAS39-202ENST00000343765 ADGRB2O60241 1585 aa19.15■□□□□ 0.66
VIPAS39-202ENST00000343765 TXNDC2Q86VQ3 553 aa19.15■□□□□ 0.66
VIPAS39-202ENST00000343765 EXOSC9Q06265 439 aaKnown RBP19.15■□□□□ 0.66
VIPAS39-202ENST00000343765 RIPK4P57078 832 aa19.14■□□□□ 0.65
VIPAS39-202ENST00000343765 SPATA31D1Q6ZQQ2 1576 aa19.14■□□□□ 0.65
VIPAS39-202ENST00000343765 REREQ9P2R6 1566 aa19.14■□□□□ 0.65
VIPAS39-202ENST00000343765 SLC4A3P48751 1232 aa19.13■□□□□ 0.65
VIPAS39-202ENST00000343765 PCDHB15Q9Y5E8 787 aa19.13■□□□□ 0.65
VIPAS39-202ENST00000343765 METP08581 1390 aa19.13■□□□□ 0.65
VIPAS39-202ENST00000343765 SMC4Q9NTJ3 1288 aa19.12■□□□□ 0.65
VIPAS39-202ENST00000343765 NCKAP5LQ9HCH0 1330 aa19.12■□□□□ 0.65
VIPAS39-202ENST00000343765 MED14O60244 1454 aa19.12■□□□□ 0.65
VIPAS39-202ENST00000343765 RTL5Q5HYW3 569 aaPredicted RBP19.12■□□□□ 0.65
VIPAS39-202ENST00000343765 FTSJ3Q8IY81 847 aaKnown RBP19.11■□□□□ 0.65
VIPAS39-202ENST00000343765 DDRGK1Q96HY6 314 aa19.11■□□□□ 0.65
VIPAS39-202ENST00000343765 ANKRD26Q9UPS8 1709 aa19.11■□□□□ 0.65
VIPAS39-202ENST00000343765 ZMYM3Q14202 1370 aa19.1■□□□□ 0.65
VIPAS39-202ENST00000343765 DEKP35659 375 aaKnown RBP19.1■□□□□ 0.65
VIPAS39-202ENST00000343765 POLKQ9UBT6 870 aa19.1■□□□□ 0.65
VIPAS39-202ENST00000343765 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
VIPAS39-202ENST00000343765 WASLO00401 505 aaPredicted RBP19.09■□□□□ 0.65
VIPAS39-202ENST00000343765 HMOX1P09601 288 aa19.09■□□□□ 0.65
VIPAS39-202ENST00000343765 ZKSCAN2Q63HK3 967 aa19.09■□□□□ 0.65
VIPAS39-202ENST00000343765 NME9Q86XW9 330 aa19.09■□□□□ 0.65
VIPAS39-202ENST00000343765 PRKAR2BP31323 418 aa19.09■□□□□ 0.65
VIPAS39-202ENST00000343765 NCBP3Q53F19 620 aaKnown RBP19.09■□□□□ 0.65
VIPAS39-202ENST00000343765 EMILIN1Q9Y6C2 1016 aa19.08■□□□□ 0.65
VIPAS39-202ENST00000343765 PNPLA6Q8IY17 1366 aa19.08■□□□□ 0.64
VIPAS39-202ENST00000343765 PMFBP1Q8TBY8 1022 aa19.08■□□□□ 0.64
VIPAS39-202ENST00000343765 SSH1Q8WYL5 1049 aa19.08■□□□□ 0.64
VIPAS39-202ENST00000343765 KIF20BQ96Q89 1820 aa19.08■□□□□ 0.64
VIPAS39-202ENST00000343765 DLC1Q96QB1 1528 aa19.08■□□□□ 0.64
VIPAS39-202ENST00000343765 PPIP5K1Q6PFW1 1433 aa19.07■□□□□ 0.64
VIPAS39-202ENST00000343765 DZIP1LQ8IYY4 767 aaKnown RBP19.07■□□□□ 0.64
VIPAS39-202ENST00000343765 MVPQ14764 893 aaKnown RBP19.07■□□□□ 0.64
VIPAS39-202ENST00000343765 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.07■□□□□ 0.64
VIPAS39-202ENST00000343765 SETD1AO15047 1707 aaKnown RBP19.06■□□□□ 0.64
VIPAS39-202ENST00000343765 ATP7BP35670 1465 aa19.06■□□□□ 0.64
VIPAS39-202ENST00000343765 DAXXQ9UER7 740 aaPredicted RBP19.06■□□□□ 0.64
VIPAS39-202ENST00000343765 NUDT16Q96DE0 195 aaKnown RBP19.05■□□□□ 0.64
VIPAS39-202ENST00000343765 TRIM27P14373 513 aa19.04■□□□□ 0.64
VIPAS39-202ENST00000343765 RSPH6AQ9H0K4 717 aa19.04■□□□□ 0.64
VIPAS39-202ENST00000343765 PNNQ9H307 717 aaKnown RBP19.04■□□□□ 0.64
VIPAS39-202ENST00000343765 NRXN3Q9Y4C0 1643 aa19.04■□□□□ 0.64
VIPAS39-202ENST00000343765 FCHSD2O94868 740 aa19.04■□□□□ 0.64
VIPAS39-202ENST00000343765 NEFMP07197 916 aa19.04■□□□□ 0.64
VIPAS39-202ENST00000343765 LRRC7Q96NW7 1537 aa19.04■□□□□ 0.64
VIPAS39-202ENST00000343765 ITPRIPQ8IWB1 547 aa19.04■□□□□ 0.64
VIPAS39-202ENST00000343765 THUMPD2Q9BTF0 503 aaKnown RBP19.04■□□□□ 0.64
VIPAS39-202ENST00000343765 CT47B1P0C2W7 299 aaPredicted RBP19.03■□□□□ 0.64
VIPAS39-202ENST00000343765 PHACTR3Q96KR7 559 aa19.03■□□□□ 0.64
VIPAS39-202ENST00000343765 NOB1Q9ULX3 412 aaKnown RBP19.03■□□□□ 0.64
VIPAS39-202ENST00000343765 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
VIPAS39-202ENST00000343765 RRS1Q15050 365 aaKnown RBP19.03■□□□□ 0.64
VIPAS39-202ENST00000343765 PDZRN3Q9UPQ7 1066 aa19.03■□□□□ 0.64
VIPAS39-202ENST00000343765 CEBPAP49715 358 aaPredicted RBP19.02■□□□□ 0.64
VIPAS39-202ENST00000343765 TNRQ92752 1358 aa19.02■□□□□ 0.64
VIPAS39-202ENST00000343765 RWDD1Q9H446 243 aaPredicted RBP19.02■□□□□ 0.63
VIPAS39-202ENST00000343765 IL16Q14005 1332 aa19.02■□□□□ 0.63
VIPAS39-202ENST00000343765 EDC4Q6P2E9 1401 aaKnown RBP19.01■□□□□ 0.63
VIPAS39-202ENST00000343765 SEC24BO95487 1268 aa19.01■□□□□ 0.63
VIPAS39-202ENST00000343765 AAMPQ13685 434 aa19.01■□□□□ 0.63
VIPAS39-202ENST00000343765 CPSF1Q10570 1443 aaKnown RBP19■□□□□ 0.63
VIPAS39-202ENST00000343765 ATF7IPQ6VMQ6 1270 aa19■□□□□ 0.63
VIPAS39-202ENST00000343765 COG3Q96JB2 828 aa19■□□□□ 0.63
VIPAS39-202ENST00000343765 CCDC61Q9Y6R9 512 aa19■□□□□ 0.63
VIPAS39-202ENST00000343765 HDGFP51858 240 aaKnown RBP18.99■□□□□ 0.63
VIPAS39-202ENST00000343765 FAM135BQ49AJ0 1406 aa18.99■□□□□ 0.63
VIPAS39-202ENST00000343765 KIF13AQ9H1H9 1805 aa18.98■□□□□ 0.63
VIPAS39-202ENST00000343765 MAP2P11137 1827 aaKnown RBP18.98■□□□□ 0.63
VIPAS39-202ENST00000343765 TMEM57Q8N5G2 664 aa18.98■□□□□ 0.63
VIPAS39-202ENST00000343765 PRR36Q9H6K5 1346 aa18.97■□□□□ 0.63
VIPAS39-202ENST00000343765 IL13P35225 146 aa18.97■□□□□ 0.63
VIPAS39-202ENST00000343765 NFE2L2Q16236 605 aa18.97■□□□□ 0.63
VIPAS39-202ENST00000343765 CPS1P31327 1500 aa18.97■□□□□ 0.63
VIPAS39-202ENST00000343765 ROBO2Q9HCK4 1378 aa18.96■□□□□ 0.63
VIPAS39-202ENST00000343765 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
VIPAS39-202ENST00000343765 ELL2O00472 640 aaPredicted RBP18.95■□□□□ 0.62
VIPAS39-202ENST00000343765 DDX19BQ9UMR2 479 aa18.95■□□□□ 0.62
VIPAS39-202ENST00000343765 CDC42BPGQ6DT37 1551 aa18.95■□□□□ 0.62
VIPAS39-202ENST00000343765 USP19O94966 1318 aa18.94■□□□□ 0.62
VIPAS39-202ENST00000343765 KIF16BQ96L93 1317 aa18.94■□□□□ 0.62
VIPAS39-202ENST00000343765 SLC26A8Q96RN1 970 aa18.93■□□□□ 0.62
VIPAS39-202ENST00000343765 LTKP29376 864 aa18.93■□□□□ 0.62
VIPAS39-202ENST00000343765 SOX12O15370 315 aa18.93■□□□□ 0.62
VIPAS39-202ENST00000343765 IPO8O15397 1037 aaKnown RBP18.92■□□□□ 0.62
VIPAS39-202ENST00000343765 TSPYL6Q8N831 410 aa18.92■□□□□ 0.62
VIPAS39-202ENST00000343765 BCL11AQ9H165 835 aa18.92■□□□□ 0.62
VIPAS39-202ENST00000343765 FAM83GA6ND36 823 aa18.92■□□□□ 0.62
VIPAS39-202ENST00000343765 TECPR2O15040 1411 aa18.91■□□□□ 0.62
VIPAS39-202ENST00000343765 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
VIPAS39-202ENST00000343765 DCTN1Q14203 1278 aa18.9■□□□□ 0.62
VIPAS39-202ENST00000343765 ALDH1L2Q3SY69 923 aa18.9■□□□□ 0.62
VIPAS39-202ENST00000343765 AATKQ6ZMQ8 1374 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms