RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 MAP2P11137 1827 aaKnown RBP26.41■■□□□ 1.82
RTN1-202ENST00000342503 RGPD8O14715 1765 aaPredicted RBP26.4■■□□□ 1.82
RTN1-202ENST00000342503 RUNDC1Q96C34 613 aa26.4■■□□□ 1.82
RTN1-202ENST00000342503 RCAN3Q9UKA8 241 aa26.4■■□□□ 1.82
RTN1-202ENST00000342503 NKTRP30414 1462 aaKnown RBP26.4■■□□□ 1.82
RTN1-202ENST00000342503 NRKQ7Z2Y5 1582 aa26.4■■□□□ 1.82
RTN1-202ENST00000342503 PLEKHG3A1L390 1219 aa26.39■■□□□ 1.82
RTN1-202ENST00000342503 GOLGA2Q08379 1002 aa26.39■■□□□ 1.81
RTN1-202ENST00000342503 NGEFQ8N5V2 710 aa26.39■■□□□ 1.81
RTN1-202ENST00000342503 IQSEC2Q5JU85 1478 aa26.37■■□□□ 1.81
RTN1-202ENST00000342503 ACEP12821 1306 aa26.37■■□□□ 1.81
RTN1-202ENST00000342503 ZRANB1Q9UGI0 708 aa26.37■■□□□ 1.81
RTN1-202ENST00000342503 U2AF1L5P0DN76 240 aaPredicted RBP26.36■■□□□ 1.81
RTN1-202ENST00000342503 U2AF1Q01081 240 aaKnown RBP eCLIP26.36■■□□□ 1.81
RTN1-202ENST00000342503 PNPLA6Q8IY17 1366 aa26.35■■□□□ 1.81
RTN1-202ENST00000342503 PELP1Q8IZL8 1130 aaKnown RBP26.34■■□□□ 1.81
RTN1-202ENST00000342503 PPP4R2Q9NY27 417 aa26.34■■□□□ 1.81
RTN1-202ENST00000342503 NPHP4O75161 1426 aaPredicted RBP26.34■■□□□ 1.81
RTN1-202ENST00000342503 FMN2Q9NZ56 1722 aa26.34■■□□□ 1.81
RTN1-202ENST00000342503 FBLN1P23142 703 aa26.34■■□□□ 1.81
RTN1-202ENST00000342503 SLFN5Q08AF3 891 aa26.34■■□□□ 1.81
RTN1-202ENST00000342503 DUSP27Q5VZP5 1158 aa26.34■■□□□ 1.81
RTN1-202ENST00000342503 POLKQ9UBT6 870 aa26.34■■□□□ 1.81
RTN1-202ENST00000342503 USP6P35125 1406 aa26.32■■□□□ 1.8
RTN1-202ENST00000342503 RRP1P56182 461 aaKnown RBP26.32■■□□□ 1.8
RTN1-202ENST00000342503 COG3Q96JB2 828 aa26.32■■□□□ 1.8
RTN1-202ENST00000342503 TTC21BQ7Z4L5 1316 aa26.32■■□□□ 1.8
RTN1-202ENST00000342503 TCP11L2Q8N4U5 519 aa26.31■■□□□ 1.8
RTN1-202ENST00000342503 NALCNQ8IZF0 1738 aa26.31■■□□□ 1.8
RTN1-202ENST00000342503 U2SURPO15042 1029 aaKnown RBP26.31■■□□□ 1.8
RTN1-202ENST00000342503 DIAPH1O60610 1272 aaKnown RBP26.31■■□□□ 1.8
RTN1-202ENST00000342503 TRMT2AQ8IZ69 625 aaKnown RBP26.3■■□□□ 1.8
RTN1-202ENST00000342503 AATKQ6ZMQ8 1374 aa26.3■■□□□ 1.8
RTN1-202ENST00000342503 ANKARQ7Z5J8 1434 aa26.29■■□□□ 1.8
RTN1-202ENST00000342503 SPINK5Q9NQ38 1064 aaPredicted RBP26.28■■□□□ 1.8
RTN1-202ENST00000342503 RRP7AQ9Y3A4 280 aaKnown RBP26.28■■□□□ 1.8
RTN1-202ENST00000342503 WWC1Q8IX03 1113 aa26.28■■□□□ 1.8
RTN1-202ENST00000342503 PMFBP1Q8TBY8 1022 aa26.28■■□□□ 1.8
RTN1-202ENST00000342503 PPM1GO15355 546 aaPredicted RBP26.27■■□□□ 1.8
RTN1-202ENST00000342503 SSH2Q76I76 1423 aa26.27■■□□□ 1.8
RTN1-202ENST00000342503 NEUROD2Q15784 382 aa26.26■■□□□ 1.79
RTN1-202ENST00000342503 DMRT2Q9Y5R5 561 aa26.26■■□□□ 1.79
RTN1-202ENST00000342503 EMILIN1Q9Y6C2 1016 aa26.26■■□□□ 1.79
RTN1-202ENST00000342503 E9PSI1 815 aa26.25■■□□□ 1.79
RTN1-202ENST00000342503 PLEKHF1Q96S99 279 aa26.25■■□□□ 1.79
RTN1-202ENST00000342503 CDK12Q9NYV4 1490 aaPredicted RBP26.25■■□□□ 1.79
RTN1-202ENST00000342503 OVOS2A0A0J9YW53 1432 aa26.23■■□□□ 1.79
RTN1-202ENST00000342503 OVOS2Q6IE36 1432 aa26.23■■□□□ 1.79
RTN1-202ENST00000342503 NCBP3Q53F19 620 aaKnown RBP26.22■■□□□ 1.79
RTN1-202ENST00000342503 NGDNQ8NEJ9 315 aaKnown RBP26.22■■□□□ 1.79
RTN1-202ENST00000342503 CCDC27Q2M243 656 aa26.22■■□□□ 1.79
RTN1-202ENST00000342503 TTC21AQ8NDW8 1320 aa26.2■■□□□ 1.79
RTN1-202ENST00000342503 NWD1Q149M9 1564 aa26.2■■□□□ 1.78
RTN1-202ENST00000342503 RRS1Q15050 365 aaKnown RBP26.19■■□□□ 1.78
RTN1-202ENST00000342503 RBM33Q96EV2 1170 aaKnown RBP26.19■■□□□ 1.78
RTN1-202ENST00000342503 B4GALNT3Q6L9W6 998 aa26.18■■□□□ 1.78
RTN1-202ENST00000342503 WDR63Q8IWG1 891 aa26.18■■□□□ 1.78
RTN1-202ENST00000342503 LRRC7Q96NW7 1537 aa26.18■■□□□ 1.78
RTN1-202ENST00000342503 ADGRL3Q9HAR2 1447 aa26.18■■□□□ 1.78
RTN1-202ENST00000342503 MAPK8IP3Q9UPT6 1336 aa26.17■■□□□ 1.78
RTN1-202ENST00000342503 PNNQ9H307 717 aaKnown RBP26.17■■□□□ 1.78
RTN1-202ENST00000342503 IL13P35225 146 aa26.17■■□□□ 1.78
RTN1-202ENST00000342503 PIK3C2AO00443 1686 aa26.16■■□□□ 1.78
RTN1-202ENST00000342503 USP31Q70CQ4 1352 aa26.15■■□□□ 1.78
RTN1-202ENST00000342503 FCHSD2O94868 740 aa26.15■■□□□ 1.78
RTN1-202ENST00000342503 PLIN1O60240 522 aa26.14■■□□□ 1.78
RTN1-202ENST00000342503 TMPOP42166 694 aaKnown RBP26.14■■□□□ 1.78
RTN1-202ENST00000342503 RSPH6AQ9H0K4 717 aa26.14■■□□□ 1.77
RTN1-202ENST00000342503 PEAK1Q9H792 1746 aa26.12■■□□□ 1.77
RTN1-202ENST00000342503 EXOC6Q8TAG9 804 aa26.11■■□□□ 1.77
RTN1-202ENST00000342503 PRKAR2BP31323 418 aa26.1■■□□□ 1.77
RTN1-202ENST00000342503 MARF1Q9Y4F3 1742 aaKnown RBP26.09■■□□□ 1.77
RTN1-202ENST00000342503 PHF8Q9UPP1 1060 aa26.09■■□□□ 1.77
RTN1-202ENST00000342503 TRIM35Q9UPQ4 493 aa26.09■■□□□ 1.77
RTN1-202ENST00000342503 HMOX1P09601 288 aa26.08■■□□□ 1.77
RTN1-202ENST00000342503 USP54Q70EL1 1684 aa26.08■■□□□ 1.77
RTN1-202ENST00000342503 C14orf37Q86TY3 774 aa26.08■■□□□ 1.76
RTN1-202ENST00000342503 RIPK4P57078 832 aa26.06■■□□□ 1.76
RTN1-202ENST00000342503 SOX12O15370 315 aa26.05■■□□□ 1.76
RTN1-202ENST00000342503 CCDC136Q96JN2 1154 aa26.05■■□□□ 1.76
RTN1-202ENST00000342503 NEFMP07197 916 aa26.05■■□□□ 1.76
RTN1-202ENST00000342503 PROSER2Q86WR7 435 aaPredicted RBP26.04■■□□□ 1.76
RTN1-202ENST00000342503 MYH16Q9H6N6 1097 aa26.04■■□□□ 1.76
RTN1-202ENST00000342503 EIF4A2Q14240 407 aaKnown RBP26.03■■□□□ 1.76
RTN1-202ENST00000342503 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.03■■□□□ 1.76
RTN1-202ENST00000342503 PHACTR3Q96KR7 559 aa26.02■■□□□ 1.76
RTN1-202ENST00000342503 CRBNQ96SW2 442 aa26.02■■□□□ 1.76
RTN1-202ENST00000342503 NLRP6P59044 892 aa26.02■■□□□ 1.76
RTN1-202ENST00000342503 C20orf194Q5TEA3 1177 aa26.02■■□□□ 1.76
RTN1-202ENST00000342503 STRCP1A6NGW2 1772 aa26.02■■□□□ 1.76
RTN1-202ENST00000342503 BCAR3O75815 825 aa26.01■■□□□ 1.75
RTN1-202ENST00000342503 MAP3K19Q56UN5 1328 aa26.01■■□□□ 1.75
RTN1-202ENST00000342503 ESCO1Q5FWF5 840 aa26.01■■□□□ 1.75
RTN1-202ENST00000342503 TSHZ2Q9NRE2 1034 aa26.01■■□□□ 1.75
RTN1-202ENST00000342503 RGPD1P0DJD0 1748 aa26■■□□□ 1.75
RTN1-202ENST00000342503 PAK3O75914 559 aaPredicted RBP26■■□□□ 1.75
RTN1-202ENST00000342503 HSP90AB2PQ58FF8 381 aa26■■□□□ 1.75
RTN1-202ENST00000342503 NFE2L2Q16236 605 aa26■■□□□ 1.75
RTN1-202ENST00000342503 DLG5Q8TDM6 1919 aa25.99■■□□□ 1.75
RTN1-202ENST00000342503 SBNO1A3KN83 1393 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms