RNA–Protein interactions for RNA: ENST00000342343.8

PDE8B-204, Transcript of phosphodiesterase 8B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE8B, Length 2,677 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-204ENST00000342343 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
PDE8B-204ENST00000342343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
PDE8B-204ENST00000342343 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
PDE8B-204ENST00000342343 A2ML1A8K2U0 1454 aa20.18■□□□□ 0.82
PDE8B-204ENST00000342343 FRAT2O75474 233 aaPredicted RBP20.18■□□□□ 0.82
PDE8B-204ENST00000342343 PLEKHF1Q96S99 279 aa20.18■□□□□ 0.82
PDE8B-204ENST00000342343 NLRP1Q9C000 1473 aa20.18■□□□□ 0.82
PDE8B-204ENST00000342343 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.18■□□□□ 0.82
PDE8B-204ENST00000342343 NINLQ9Y2I6 1382 aa20.18■□□□□ 0.82
PDE8B-204ENST00000342343 ARHGEF40Q8TER5 1519 aa20.17■□□□□ 0.82
PDE8B-204ENST00000342343 CLUAP1Q96AJ1 413 aa20.17■□□□□ 0.82
PDE8B-204ENST00000342343 HDGFL2Q7Z4V5 671 aaPredicted RBP20.15■□□□□ 0.82
PDE8B-204ENST00000342343 COL3A1P02461 1466 aaPredicted RBP20.15■□□□□ 0.82
PDE8B-204ENST00000342343 RIMS2Q9UQ26 1411 aa20.15■□□□□ 0.82
PDE8B-204ENST00000342343 TMPOP42166 694 aaKnown RBP20.14■□□□□ 0.81
PDE8B-204ENST00000342343 TRIM35Q9UPQ4 493 aa20.14■□□□□ 0.81
PDE8B-204ENST00000342343 AGLP35573 1532 aa20.13■□□□□ 0.81
PDE8B-204ENST00000342343 ADGRB2O60241 1585 aa20.12■□□□□ 0.81
PDE8B-204ENST00000342343 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
PDE8B-204ENST00000342343 PCDHB15Q9Y5E8 787 aa20.11■□□□□ 0.81
PDE8B-204ENST00000342343 NCKAP5LQ9HCH0 1330 aa20.11■□□□□ 0.81
PDE8B-204ENST00000342343 PPP6R1Q9UPN7 881 aa20.1■□□□□ 0.81
PDE8B-204ENST00000342343 SPATA31D1Q6ZQQ2 1576 aa20.1■□□□□ 0.81
PDE8B-204ENST00000342343 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
PDE8B-204ENST00000342343 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
PDE8B-204ENST00000342343 TXNDC2Q86VQ3 553 aa20.1■□□□□ 0.81
PDE8B-204ENST00000342343 REREQ9P2R6 1566 aa20.1■□□□□ 0.81
PDE8B-204ENST00000342343 METP08581 1390 aa20.1■□□□□ 0.81
PDE8B-204ENST00000342343 MAPK8IP3Q9UPT6 1336 aa20.09■□□□□ 0.81
PDE8B-204ENST00000342343 ANKRD26Q9UPS8 1709 aa20.09■□□□□ 0.81
PDE8B-204ENST00000342343 RIPK4P57078 832 aa20.08■□□□□ 0.81
PDE8B-204ENST00000342343 ZRANB1Q9UGI0 708 aa20.08■□□□□ 0.81
PDE8B-204ENST00000342343 SETD1AO15047 1707 aaKnown RBP20.07■□□□□ 0.8
PDE8B-204ENST00000342343 MED14O60244 1454 aa20.07■□□□□ 0.8
PDE8B-204ENST00000342343 POLKQ9UBT6 870 aa20.07■□□□□ 0.8
PDE8B-204ENST00000342343 ZMYM3Q14202 1370 aa20.06■□□□□ 0.8
PDE8B-204ENST00000342343 PNPLA6Q8IY17 1366 aa20.06■□□□□ 0.8
PDE8B-204ENST00000342343 NCBP3Q53F19 620 aaKnown RBP20.05■□□□□ 0.8
PDE8B-204ENST00000342343 KIF20BQ96Q89 1820 aa20.05■□□□□ 0.8
PDE8B-204ENST00000342343 NME9Q86XW9 330 aa20.04■□□□□ 0.8
PDE8B-204ENST00000342343 WASLO00401 505 aaPredicted RBP20.04■□□□□ 0.8
PDE8B-204ENST00000342343 ESF1Q9H501 851 aaKnown RBP20.04■□□□□ 0.8
PDE8B-204ENST00000342343 EMILIN1Q9Y6C2 1016 aa20.04■□□□□ 0.8
PDE8B-204ENST00000342343 NRXN3Q9Y4C0 1643 aa20.04■□□□□ 0.8
PDE8B-204ENST00000342343 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
PDE8B-204ENST00000342343 USP19O94966 1318 aa20.03■□□□□ 0.8
PDE8B-204ENST00000342343 DLC1Q96QB1 1528 aa20.03■□□□□ 0.8
PDE8B-204ENST00000342343 HMOX1P09601 288 aa20.03■□□□□ 0.8
PDE8B-204ENST00000342343 SMC4Q9NTJ3 1288 aa20.03■□□□□ 0.8
PDE8B-204ENST00000342343 BECN1Q14457 450 aa20.02■□□□□ 0.8
PDE8B-204ENST00000342343 PRKAR2BP31323 418 aa20.02■□□□□ 0.8
PDE8B-204ENST00000342343 ZKSCAN2Q63HK3 967 aa20.01■□□□□ 0.79
PDE8B-204ENST00000342343 FAM43AQ8N2R8 423 aa20.01■□□□□ 0.79
PDE8B-204ENST00000342343 PHACTR3Q96KR7 559 aa20.01■□□□□ 0.79
PDE8B-204ENST00000342343 PPIP5K1Q6PFW1 1433 aa20.01■□□□□ 0.79
PDE8B-204ENST00000342343 SEC24BO95487 1268 aa20■□□□□ 0.79
PDE8B-204ENST00000342343 MVPQ14764 893 aaKnown RBP20■□□□□ 0.79
PDE8B-204ENST00000342343 MAP2P11137 1827 aaKnown RBP20■□□□□ 0.79
PDE8B-204ENST00000342343 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
PDE8B-204ENST00000342343 FTSJ3Q8IY81 847 aaKnown RBP19.99■□□□□ 0.79
PDE8B-204ENST00000342343 DZIP1LQ8IYY4 767 aaKnown RBP19.99■□□□□ 0.79
PDE8B-204ENST00000342343 NUDT16Q96DE0 195 aaKnown RBP19.99■□□□□ 0.79
PDE8B-204ENST00000342343 KIF13AQ9H1H9 1805 aa19.99■□□□□ 0.79
PDE8B-204ENST00000342343 TRIM27P14373 513 aa19.99■□□□□ 0.79
PDE8B-204ENST00000342343 THUMPD2Q9BTF0 503 aaKnown RBP19.99■□□□□ 0.79
PDE8B-204ENST00000342343 ATP7BP35670 1465 aa19.99■□□□□ 0.79
PDE8B-204ENST00000342343 EIF5BO60841 1220 aaKnown RBP19.99■□□□□ 0.79
PDE8B-204ENST00000342343 LRRC7Q96NW7 1537 aa19.98■□□□□ 0.79
PDE8B-204ENST00000342343 FCHSD2O94868 740 aa19.98■□□□□ 0.79
PDE8B-204ENST00000342343 PMFBP1Q8TBY8 1022 aa19.98■□□□□ 0.79
PDE8B-204ENST00000342343 NOB1Q9ULX3 412 aaKnown RBP19.98■□□□□ 0.79
PDE8B-204ENST00000342343 PDZRN3Q9UPQ7 1066 aa19.98■□□□□ 0.79
PDE8B-204ENST00000342343 CPSF1Q10570 1443 aaKnown RBP19.97■□□□□ 0.79
PDE8B-204ENST00000342343 RRS1Q15050 365 aaKnown RBP19.97■□□□□ 0.79
PDE8B-204ENST00000342343 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDE8B-204ENST00000342343 NUTM2FA1L443 756 aa19.95■□□□□ 0.78
PDE8B-204ENST00000342343 CT47B1P0C2W7 299 aaPredicted RBP19.95■□□□□ 0.78
PDE8B-204ENST00000342343 IL16Q14005 1332 aa19.95■□□□□ 0.78
PDE8B-204ENST00000342343 CPS1P31327 1500 aa19.94■□□□□ 0.78
PDE8B-204ENST00000342343 PRR36Q9H6K5 1346 aa19.94■□□□□ 0.78
PDE8B-204ENST00000342343 ITPRIPQ8IWB1 547 aa19.94■□□□□ 0.78
PDE8B-204ENST00000342343 SLKQ9H2G2 1235 aaPredicted RBP19.94■□□□□ 0.78
PDE8B-204ENST00000342343 FAM135BQ49AJ0 1406 aa19.94■□□□□ 0.78
PDE8B-204ENST00000342343 IL13P35225 146 aa19.93■□□□□ 0.78
PDE8B-204ENST00000342343 EDC4Q6P2E9 1401 aaKnown RBP19.93■□□□□ 0.78
PDE8B-204ENST00000342343 ATF7IPQ6VMQ6 1270 aa19.93■□□□□ 0.78
PDE8B-204ENST00000342343 TNRQ92752 1358 aa19.93■□□□□ 0.78
PDE8B-204ENST00000342343 CCDC61Q9Y6R9 512 aa19.93■□□□□ 0.78
PDE8B-204ENST00000342343 PNNQ9H307 717 aaKnown RBP19.93■□□□□ 0.78
PDE8B-204ENST00000342343 CEBPAP49715 358 aaPredicted RBP19.92■□□□□ 0.78
PDE8B-204ENST00000342343 RWDD1Q9H446 243 aaPredicted RBP19.92■□□□□ 0.78
PDE8B-204ENST00000342343 UPF2Q9HAU5 1272 aaKnown RBP19.92■□□□□ 0.78
PDE8B-204ENST00000342343 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
PDE8B-204ENST00000342343 TMEM57Q8N5G2 664 aa19.92■□□□□ 0.78
PDE8B-204ENST00000342343 ROBO2Q9HCK4 1378 aa19.92■□□□□ 0.78
PDE8B-204ENST00000342343 AAMPQ13685 434 aa19.91■□□□□ 0.78
PDE8B-204ENST00000342343 LTKP29376 864 aa19.9■□□□□ 0.78
PDE8B-204ENST00000342343 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
PDE8B-204ENST00000342343 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
PDE8B-204ENST00000342343 L1TD1Q5T7N2 865 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms