RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 SSFA2P28290 1259 aa17.92■□□□□ 0.46
RRP1B-201ENST00000340648 FOSBP53539 338 aa17.92■□□□□ 0.46
RRP1B-201ENST00000340648 CCAR2Q8N163 923 aaKnown RBP17.91■□□□□ 0.46
RRP1B-201ENST00000340648 RNF20Q5VTR2 975 aa17.91■□□□□ 0.46
RRP1B-201ENST00000340648 CREBRFQ8IUR6 639 aa17.91■□□□□ 0.46
RRP1B-201ENST00000340648 GPRASP1Q5JY77 1395 aa17.9■□□□□ 0.46
RRP1B-201ENST00000340648 TAF7LQ5H9L4 462 aa17.9■□□□□ 0.46
RRP1B-201ENST00000340648 TRIM27P14373 513 aa17.9■□□□□ 0.46
RRP1B-201ENST00000340648 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
RRP1B-201ENST00000340648 CABP1Q9NZU7 370 aa17.9■□□□□ 0.46
RRP1B-201ENST00000340648 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
RRP1B-201ENST00000340648 SYCE3A1L190 88 aa17.9■□□□□ 0.46
RRP1B-201ENST00000340648 SURF6O75683 361 aaKnown RBP17.9■□□□□ 0.46
RRP1B-201ENST00000340648 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
RRP1B-201ENST00000340648 SPC24Q8NBT2 197 aa17.9■□□□□ 0.46
RRP1B-201ENST00000340648 PANK2Q9BZ23 570 aa17.9■□□□□ 0.46
RRP1B-201ENST00000340648 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
RRP1B-201ENST00000340648 EID1Q9Y6B2 187 aa17.89■□□□□ 0.45
RRP1B-201ENST00000340648 XRCC6P12956 609 aaKnown RBP eCLIP17.89■□□□□ 0.45
RRP1B-201ENST00000340648 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
RRP1B-201ENST00000340648 CFAP43Q8NDM7 1665 aa17.89■□□□□ 0.45
RRP1B-201ENST00000340648 GNAI3P08754 354 aa17.89■□□□□ 0.45
RRP1B-201ENST00000340648 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
RRP1B-201ENST00000340648 HMGN5P82970 282 aaKnown RBP17.89■□□□□ 0.45
RRP1B-201ENST00000340648 LETM1O95202 739 aaPredicted RBP17.88■□□□□ 0.45
RRP1B-201ENST00000340648 HOMER1Q86YM7 354 aa17.88■□□□□ 0.45
RRP1B-201ENST00000340648 GNAI2P04899 355 aa17.87■□□□□ 0.45
RRP1B-201ENST00000340648 G3BP1Q13283 466 aaKnown RBP eCLIP17.87■□□□□ 0.453e-8■■□□□ 12.1
RRP1B-201ENST00000340648 TRIM5Q9C035 493 aa17.87■□□□□ 0.45
RRP1B-201ENST00000340648 HSP90AB4PQ58FF6 505 aa17.87■□□□□ 0.45
RRP1B-201ENST00000340648 CNTROBQ8N137 903 aa17.87■□□□□ 0.45
RRP1B-201ENST00000340648 CCDC34Q96HJ3 373 aa17.87■□□□□ 0.45
RRP1B-201ENST00000340648 RNF123Q5XPI4 1314 aa17.86■□□□□ 0.45
RRP1B-201ENST00000340648 C1orf141Q5JVX7 400 aa17.86■□□□□ 0.45
RRP1B-201ENST00000340648 PLEKHH1Q9ULM0 1364 aa17.86■□□□□ 0.45
RRP1B-201ENST00000340648 SEC24BO95487 1268 aa17.86■□□□□ 0.45
RRP1B-201ENST00000340648 GOLGA6L1Q8N7Z2 621 aa17.86■□□□□ 0.45
RRP1B-201ENST00000340648 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
RRP1B-201ENST00000340648 TOMM22Q9NS69 142 aa17.86■□□□□ 0.45
RRP1B-201ENST00000340648 WDR33Q9C0J8 1336 aaKnown RBP17.85■□□□□ 0.45
RRP1B-201ENST00000340648 TPM3P06753 285 aa17.85■□□□□ 0.45
RRP1B-201ENST00000340648 SULT6B1Q6IMI4 303 aa17.85■□□□□ 0.45
RRP1B-201ENST00000340648 CCDC73Q6ZRK6 1079 aa17.85■□□□□ 0.45
RRP1B-201ENST00000340648 TPD52L1Q16890 204 aaPredicted RBP17.85■□□□□ 0.45
RRP1B-201ENST00000340648 FCHSD2O94868 740 aa17.84■□□□□ 0.45
RRP1B-201ENST00000340648 NEXNQ0ZGT2 675 aa17.84■□□□□ 0.45
RRP1B-201ENST00000340648 LRRCC1Q9C099 1032 aa17.84■□□□□ 0.45
RRP1B-201ENST00000340648 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
RRP1B-201ENST00000340648 MAP4K4O95819 1239 aaPredicted RBP17.84■□□□□ 0.45
RRP1B-201ENST00000340648 ZNF428Q96B54 188 aa17.83■□□□□ 0.45
RRP1B-201ENST00000340648 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.44
RRP1B-201ENST00000340648 SMARCA5O60264 1052 aaPredicted RBP17.83■□□□□ 0.44
RRP1B-201ENST00000340648 UBE2Q2Q8WVN8 375 aa17.83■□□□□ 0.44
RRP1B-201ENST00000340648 TNNQ9UQP3 1299 aa17.83■□□□□ 0.44
RRP1B-201ENST00000340648 CCDC30Q5VVM6 783 aa17.82■□□□□ 0.44
RRP1B-201ENST00000340648 ADGRF5Q8IZF2 1346 aa17.82■□□□□ 0.44
RRP1B-201ENST00000340648 NFE2L2Q16236 605 aa17.82■□□□□ 0.44
RRP1B-201ENST00000340648 NPHP1O15259 732 aa17.82■□□□□ 0.44
RRP1B-201ENST00000340648 SCAF11Q99590 1463 aaKnown RBP17.82■□□□□ 0.44
RRP1B-201ENST00000340648 CLASRPQ8N2M8 674 aaKnown RBP17.81■□□□□ 0.44
RRP1B-201ENST00000340648 GPATCH8Q9UKJ3 1502 aaKnown RBP17.81■□□□□ 0.44
RRP1B-201ENST00000340648 TBC1D9Q6ZT07 1266 aa17.81■□□□□ 0.44
RRP1B-201ENST00000340648 TCOF1Q13428 1488 aaKnown RBP17.81■□□□□ 0.44
RRP1B-201ENST00000340648 CLCN1P35523 988 aa17.8■□□□□ 0.44
RRP1B-201ENST00000340648 RPAP2Q8IXW5 612 aaPredicted RBP17.8■□□□□ 0.44
RRP1B-201ENST00000340648 ALDH1L2Q3SY69 923 aa17.8■□□□□ 0.44
RRP1B-201ENST00000340648 CHMP4CQ96CF2 233 aa17.8■□□□□ 0.44
RRP1B-201ENST00000340648 CPLX1O14810 134 aa17.8■□□□□ 0.44
RRP1B-201ENST00000340648 CCT4P50991 539 aaKnown RBP17.8■□□□□ 0.44
RRP1B-201ENST00000340648 KIF14Q15058 1648 aa17.8■□□□□ 0.44
RRP1B-201ENST00000340648 RRS1Q15050 365 aaKnown RBP17.79■□□□□ 0.44
RRP1B-201ENST00000340648 NUTM2GQ5VZR2 741 aa17.79■□□□□ 0.44
RRP1B-201ENST00000340648 FSD1Q9BTV5 496 aa17.79■□□□□ 0.44
RRP1B-201ENST00000340648 RASSF8Q8NHQ8 419 aa17.79■□□□□ 0.44
RRP1B-201ENST00000340648 PSMA5P28066 241 aa17.79■□□□□ 0.44
RRP1B-201ENST00000340648 EXOC6BQ9Y2D4 811 aa17.79■□□□□ 0.44
RRP1B-201ENST00000340648 PRAG1Q86YV5 1406 aa17.79■□□□□ 0.44
RRP1B-201ENST00000340648 BAG4O95429 457 aaKnown RBP17.79■□□□□ 0.44
RRP1B-201ENST00000340648 CCDC192P0DO97 292 aa17.79■□□□□ 0.44
RRP1B-201ENST00000340648 BMP2KLQ5H9B9 411 aa17.79■□□□□ 0.44
RRP1B-201ENST00000340648 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
RRP1B-201ENST00000340648 PER1O15534 1290 aaPredicted RBP17.78■□□□□ 0.44
RRP1B-201ENST00000340648 UPF3BQ9BZI7 483 aaKnown RBP17.78■□□□□ 0.44
RRP1B-201ENST00000340648 AIMP1Q12904 312 aaKnown RBP17.78■□□□□ 0.44
RRP1B-201ENST00000340648 TESK2Q96S53 571 aa17.78■□□□□ 0.44
RRP1B-201ENST00000340648 IL1RAPL2Q9NP60 686 aa17.78■□□□□ 0.44
RRP1B-201ENST00000340648 DDX58O95786 925 aaKnown RBP17.78■□□□□ 0.44
RRP1B-201ENST00000340648 RLBP1P12271 317 aa17.78■□□□□ 0.44
RRP1B-201ENST00000340648 PES1O00541 588 aaKnown RBP17.77■□□□□ 0.44
RRP1B-201ENST00000340648 DCTN1Q14203 1278 aa17.77■□□□□ 0.44
RRP1B-201ENST00000340648 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
RRP1B-201ENST00000340648 SPINK5Q9NQ38 1064 aaPredicted RBP17.77■□□□□ 0.44
RRP1B-201ENST00000340648 CEBPZQ03701 1054 aaKnown RBP17.77■□□□□ 0.43
RRP1B-201ENST00000340648 MNS1Q8NEH6 495 aa17.77■□□□□ 0.43
RRP1B-201ENST00000340648 KDM2BQ8NHM5 1336 aa17.77■□□□□ 0.43
RRP1B-201ENST00000340648 ABCC11Q96J66 1382 aa17.77■□□□□ 0.43
RRP1B-201ENST00000340648 PDCP20941 246 aa17.76■□□□□ 0.43
RRP1B-201ENST00000340648 TEX35Q5T0J7 233 aa17.76■□□□□ 0.43
RRP1B-201ENST00000340648 GAS2L2Q8NHY3 880 aa17.76■□□□□ 0.43
RRP1B-201ENST00000340648 CYP46A1Q9Y6A2 500 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms