RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 SPC24Q8NBT2 197 aa16.46■□□□□ 0.23
PDE4D-203ENST00000340635 CNTROBQ8N137 903 aa16.45■□□□□ 0.22
PDE4D-203ENST00000340635 CFAP45Q9UL16 551 aa16.45■□□□□ 0.22
PDE4D-203ENST00000340635 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
PDE4D-203ENST00000340635 API5Q9BZZ5 524 aaKnown RBP16.44■□□□□ 0.22
PDE4D-203ENST00000340635 ERC1Q8IUD2 1116 aa16.44■□□□□ 0.22
PDE4D-203ENST00000340635 FAM177A1Q8N128 213 aaPredicted RBP16.43■□□□□ 0.22
PDE4D-203ENST00000340635 IBSPP21815 317 aaPredicted RBP16.43■□□□□ 0.22
PDE4D-203ENST00000340635 POTEJP0CG39 1038 aa16.43■□□□□ 0.22
PDE4D-203ENST00000340635 JMYQ8N9B5 988 aa16.43■□□□□ 0.22
PDE4D-203ENST00000340635 CFAP57Q96MR6 1250 aa16.43■□□□□ 0.22
PDE4D-203ENST00000340635 WASHC2CQ9Y4E1 1318 aa16.43■□□□□ 0.22
PDE4D-203ENST00000340635 STK38Q15208 465 aa16.42■□□□□ 0.22
PDE4D-203ENST00000340635 PDCP20941 246 aa16.42■□□□□ 0.22
PDE4D-203ENST00000340635 CEBPZQ03701 1054 aaKnown RBP16.42■□□□□ 0.22
PDE4D-203ENST00000340635 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
PDE4D-203ENST00000340635 TICAM2Q86XR7 235 aa16.42■□□□□ 0.22
PDE4D-203ENST00000340635 FSD1Q9BTV5 496 aa16.42■□□□□ 0.22
PDE4D-203ENST00000340635 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
PDE4D-203ENST00000340635 PSME1Q06323 249 aa16.41■□□□□ 0.22
PDE4D-203ENST00000340635 CAVIN1Q6NZI2 390 aaKnown RBP16.41■□□□□ 0.22
PDE4D-203ENST00000340635 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
PDE4D-203ENST00000340635 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
PDE4D-203ENST00000340635 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
PDE4D-203ENST00000340635 CETN2P41208 172 aa16.41■□□□□ 0.22
PDE4D-203ENST00000340635 CCDC113Q9H0I3 377 aa16.4■□□□□ 0.22
PDE4D-203ENST00000340635 DZIP1LQ8IYY4 767 aaKnown RBP16.4■□□□□ 0.22
PDE4D-203ENST00000340635 RRP1P56182 461 aaKnown RBP16.4■□□□□ 0.22
PDE4D-203ENST00000340635 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
PDE4D-203ENST00000340635 PUS7Q96PZ0 661 aaKnown RBP16.4■□□□□ 0.22
PDE4D-203ENST00000340635 C22orf23Q9BZE7 217 aa16.4■□□□□ 0.22
PDE4D-203ENST00000340635 ANKRD18BA2A2Z9 1011 aa16.4■□□□□ 0.22
PDE4D-203ENST00000340635 TAF4BQ92750 862 aa16.4■□□□□ 0.22
PDE4D-203ENST00000340635 MBD3O95983 291 aa16.4■□□□□ 0.22
PDE4D-203ENST00000340635 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
PDE4D-203ENST00000340635 COMMD10Q9Y6G5 202 aa16.39■□□□□ 0.22
PDE4D-203ENST00000340635 KIAA1328Q86T90 577 aa16.39■□□□□ 0.21
PDE4D-203ENST00000340635 CBFA2T2O43439 604 aa16.39■□□□□ 0.21
PDE4D-203ENST00000340635 ANKRD30AQ9BXX3 1397 aa16.39■□□□□ 0.21
PDE4D-203ENST00000340635 EPB41L2O43491 1005 aaKnown RBP16.39■□□□□ 0.21
PDE4D-203ENST00000340635 MPHOSPH9Q99550 1183 aa16.38■□□□□ 0.21
PDE4D-203ENST00000340635 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
PDE4D-203ENST00000340635 KIF6Q6ZMV9 814 aa16.38■□□□□ 0.21
PDE4D-203ENST00000340635 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
PDE4D-203ENST00000340635 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
PDE4D-203ENST00000340635 HOMER2Q9NSB8 354 aa16.38■□□□□ 0.21
PDE4D-203ENST00000340635 TSPYL4Q9UJ04 414 aa16.38■□□□□ 0.21
PDE4D-203ENST00000340635 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
PDE4D-203ENST00000340635 BMP2KQ9NSY1 1161 aaPredicted RBP16.37■□□□□ 0.21
PDE4D-203ENST00000340635 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
PDE4D-203ENST00000340635 TRIM22Q8IYM9 498 aa16.37■□□□□ 0.21
PDE4D-203ENST00000340635 GNL3LQ9NVN8 582 aaKnown RBP16.37■□□□□ 0.21
PDE4D-203ENST00000340635 HIP1O00291 1037 aa16.37■□□□□ 0.21
PDE4D-203ENST00000340635 ZWINTO95229 277 aa16.37■□□□□ 0.21
PDE4D-203ENST00000340635 UBTFL1P0CB47 393 aaPredicted RBP16.37■□□□□ 0.21
PDE4D-203ENST00000340635 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
PDE4D-203ENST00000340635 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
PDE4D-203ENST00000340635 TMEM87AQ8NBN3 555 aa16.36■□□□□ 0.21
PDE4D-203ENST00000340635 CDC45O75419 566 aa16.36■□□□□ 0.21
PDE4D-203ENST00000340635 CCDC192P0DO97 292 aa16.36■□□□□ 0.21
PDE4D-203ENST00000340635 TMCO3Q6UWJ1 677 aa16.36■□□□□ 0.21
PDE4D-203ENST00000340635 RIPK4P57078 832 aa16.35■□□□□ 0.21
PDE4D-203ENST00000340635 CCDC148Q8NFR7 591 aa16.35■□□□□ 0.21
PDE4D-203ENST00000340635 EXOC6Q8TAG9 804 aa16.35■□□□□ 0.21
PDE4D-203ENST00000340635 PSMD1Q99460 953 aa16.35■□□□□ 0.21
PDE4D-203ENST00000340635 LNPKQ9C0E8 428 aa16.35■□□□□ 0.21
PDE4D-203ENST00000340635 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
PDE4D-203ENST00000340635 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
PDE4D-203ENST00000340635 SSBP05455 408 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDE4D-203ENST00000340635 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
PDE4D-203ENST00000340635 TTC39AQ5SRH9 613 aa16.35■□□□□ 0.21
PDE4D-203ENST00000340635 UACAQ9BZF9 1416 aa16.35■□□□□ 0.21
PDE4D-203ENST00000340635 ZNF76P36508 570 aa16.34■□□□□ 0.21
PDE4D-203ENST00000340635 RBM5P52756 815 aaKnown RBP eCLIP16.34■□□□□ 0.21
PDE4D-203ENST00000340635 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
PDE4D-203ENST00000340635 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
PDE4D-203ENST00000340635 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
PDE4D-203ENST00000340635 PABPN1LA6NDY0 278 aaKnown RBP16.34■□□□□ 0.21
PDE4D-203ENST00000340635 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
PDE4D-203ENST00000340635 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.21
PDE4D-203ENST00000340635 FIBPO43427 364 aa16.34■□□□□ 0.21
PDE4D-203ENST00000340635 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
PDE4D-203ENST00000340635 ME1P48163 572 aa16.33■□□□□ 0.21
PDE4D-203ENST00000340635 PANK3Q9H999 370 aa16.33■□□□□ 0.21
PDE4D-203ENST00000340635 GOPCQ9HD26 462 aa16.33■□□□□ 0.21
PDE4D-203ENST00000340635 GSTTP1A0A1W2PQM5 241 aa16.33■□□□□ 0.2
PDE4D-203ENST00000340635 RRP9O43818 475 aaKnown RBP16.33■□□□□ 0.2
PDE4D-203ENST00000340635 AEBP2Q6ZN18 517 aaPredicted RBP16.33■□□□□ 0.2
PDE4D-203ENST00000340635 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.2
PDE4D-203ENST00000340635 PPP1R12BO60237 982 aaPredicted RBP16.33■□□□□ 0.2
PDE4D-203ENST00000340635 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.2
PDE4D-203ENST00000340635 MYZAPP0CAP1 466 aa16.33■□□□□ 0.2
PDE4D-203ENST00000340635 FERP16591 822 aa16.33■□□□□ 0.2
PDE4D-203ENST00000340635 CCDC57Q2TAC2 916 aa16.33■□□□□ 0.2
PDE4D-203ENST00000340635 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.2
PDE4D-203ENST00000340635 FAM177BA6PVY3 158 aa16.33■□□□□ 0.2
PDE4D-203ENST00000340635 CCDC175P0C221 793 aa16.33■□□□□ 0.2
PDE4D-203ENST00000340635 HOOK3Q86VS8 718 aa16.33■□□□□ 0.2
PDE4D-203ENST00000340635 TRAK2O60296 914 aa16.32■□□□□ 0.2
PDE4D-203ENST00000340635 NOL7Q9UMY1 257 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms