RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
RTN4-202ENST00000337526 WWC1Q8IX03 1113 aa16.56■□□□□ 0.24
RTN4-202ENST00000337526 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
RTN4-202ENST00000337526 GNAI2P04899 355 aa16.56■□□□□ 0.24
RTN4-202ENST00000337526 RALYLQ86SE5 291 aaKnown RBP16.56■□□□□ 0.24
RTN4-202ENST00000337526 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
RTN4-202ENST00000337526 FSD1Q9BTV5 496 aa16.56■□□□□ 0.24
RTN4-202ENST00000337526 CABP1Q9NZU7 370 aa16.56■□□□□ 0.24
RTN4-202ENST00000337526 AEBP2Q6ZN18 517 aaPredicted RBP16.56■□□□□ 0.24
RTN4-202ENST00000337526 NFXL1Q6ZNB6 911 aa16.56■□□□□ 0.24
RTN4-202ENST00000337526 ANKRD20A12PQ8NF67 263 aa16.55■□□□□ 0.24
RTN4-202ENST00000337526 PDE4CQ08493 712 aa16.55■□□□□ 0.24
RTN4-202ENST00000337526 SULT6B1Q6IMI4 303 aa16.55■□□□□ 0.24
RTN4-202ENST00000337526 CHD1LQ86WJ1 897 aa16.55■□□□□ 0.24
RTN4-202ENST00000337526 MCM4P33991 863 aa16.55■□□□□ 0.24
RTN4-202ENST00000337526 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
RTN4-202ENST00000337526 VPS53Q5VIR6 699 aa16.54■□□□□ 0.24
RTN4-202ENST00000337526 TPM2P07951 284 aa16.54■□□□□ 0.24
RTN4-202ENST00000337526 PDCP20941 246 aa16.54■□□□□ 0.24
RTN4-202ENST00000337526 CEP89Q96ST8 783 aa16.54■□□□□ 0.24
RTN4-202ENST00000337526 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
RTN4-202ENST00000337526 WASHC4Q2M389 1173 aa16.54■□□□□ 0.24
RTN4-202ENST00000337526 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
RTN4-202ENST00000337526 FIBPO43427 364 aa16.53■□□□□ 0.24
RTN4-202ENST00000337526 CCDC173Q0VFZ6 552 aa16.53■□□□□ 0.24
RTN4-202ENST00000337526 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
RTN4-202ENST00000337526 SAFBQ15424 915 aaKnown RBP eCLIP16.53■□□□□ 0.241e-6■■□□□ 14.5
RTN4-202ENST00000337526 NLRP2Q9NX02 1062 aa16.53■□□□□ 0.24
RTN4-202ENST00000337526 TRIM5Q9C035 493 aa16.53■□□□□ 0.24
RTN4-202ENST00000337526 C20orf194Q5TEA3 1177 aa16.52■□□□□ 0.24
RTN4-202ENST00000337526 LETM1O95202 739 aaPredicted RBP16.52■□□□□ 0.24
RTN4-202ENST00000337526 ANKRD30BQ9BXX2 1392 aa16.52■□□□□ 0.24
RTN4-202ENST00000337526 CCDC70Q6NSX1 233 aa16.52■□□□□ 0.23
RTN4-202ENST00000337526 TSPY26PQ9H489 355 aa16.52■□□□□ 0.23
RTN4-202ENST00000337526 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.23
RTN4-202ENST00000337526 SKAP1Q86WV1 359 aa16.51■□□□□ 0.23
RTN4-202ENST00000337526 CDK19Q9BWU1 502 aa16.51■□□□□ 0.23
RTN4-202ENST00000337526 ERICH2A1L162 156 aa16.51■□□□□ 0.23
RTN4-202ENST00000337526 PCMTD1Q96MG8 357 aaPredicted RBP16.51■□□□□ 0.23
RTN4-202ENST00000337526 MAP7D2Q96T17 732 aa16.51■□□□□ 0.23
RTN4-202ENST00000337526 NAT10Q9H0A0 1025 aaKnown RBP16.51■□□□□ 0.23
RTN4-202ENST00000337526 HDGFL1Q5TGJ6 251 aa16.5■□□□□ 0.23
RTN4-202ENST00000337526 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
RTN4-202ENST00000337526 CCT4P50991 539 aaKnown RBP16.5■□□□□ 0.23
RTN4-202ENST00000337526 MTERF4Q7Z6M4 381 aaKnown RBP16.5■□□□□ 0.23
RTN4-202ENST00000337526 TXNDC2Q86VQ3 553 aa16.5■□□□□ 0.23
RTN4-202ENST00000337526 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
RTN4-202ENST00000337526 MNS1Q8NEH6 495 aa16.5■□□□□ 0.23
RTN4-202ENST00000337526 ZNF428Q96B54 188 aa16.5■□□□□ 0.23
RTN4-202ENST00000337526 SYTL4Q96C24 671 aaPredicted RBP16.5■□□□□ 0.23
RTN4-202ENST00000337526 MAGI1Q96QZ7 1491 aaPredicted RBP16.5■□□□□ 0.23
RTN4-202ENST00000337526 VPS37DQ86XT2 251 aa16.5■□□□□ 0.23
RTN4-202ENST00000337526 CCDC47Q96A33 483 aaKnown RBP16.5■□□□□ 0.23
RTN4-202ENST00000337526 LRRCC1Q9C099 1032 aa16.49■□□□□ 0.23
RTN4-202ENST00000337526 TMPOP42166 694 aaKnown RBP16.48■□□□□ 0.23
RTN4-202ENST00000337526 TEX35Q5T0J7 233 aa16.48■□□□□ 0.23
RTN4-202ENST00000337526 SLC52A1Q9NWF4 448 aa16.48■□□□□ 0.23
RTN4-202ENST00000337526 KINO60870 393 aaKnown RBP16.48■□□□□ 0.23
RTN4-202ENST00000337526 FCHSD2O94868 740 aa16.48■□□□□ 0.23
RTN4-202ENST00000337526 AMOTL1Q8IY63 956 aa16.48■□□□□ 0.23
RTN4-202ENST00000337526 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
RTN4-202ENST00000337526 TMEM57Q8N5G2 664 aa16.48■□□□□ 0.23
RTN4-202ENST00000337526 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
RTN4-202ENST00000337526 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
RTN4-202ENST00000337526 BCL11BQ9C0K0 894 aaPredicted RBP16.47■□□□□ 0.23
RTN4-202ENST00000337526 HIP1O00291 1037 aa16.47■□□□□ 0.23
RTN4-202ENST00000337526 ARGLU1Q9NWB6 273 aaPredicted RBP16.47■□□□□ 0.23
RTN4-202ENST00000337526 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
RTN4-202ENST00000337526 PLEKHH2Q8IVE3 1493 aa16.47■□□□□ 0.23
RTN4-202ENST00000337526 HMGN5P82970 282 aaKnown RBP16.46■□□□□ 0.23
RTN4-202ENST00000337526 WDR33Q9C0J8 1336 aaKnown RBP16.46■□□□□ 0.23
RTN4-202ENST00000337526 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.22
RTN4-202ENST00000337526 DNAJC2Q99543 621 aaKnown RBP16.46■□□□□ 0.22
RTN4-202ENST00000337526 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.22
RTN4-202ENST00000337526 ESPNB1AK53 854 aa16.45■□□□□ 0.22
RTN4-202ENST00000337526 RARSP54136 660 aaKnown RBP16.45■□□□□ 0.22
RTN4-202ENST00000337526 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
RTN4-202ENST00000337526 FMNL2Q96PY5 1086 aa16.45■□□□□ 0.22
RTN4-202ENST00000337526 SRCIN1Q9C0H9 1055 aa16.45■□□□□ 0.22
RTN4-202ENST00000337526 PLEKHO1Q53GL0 409 aaPredicted RBP16.45■□□□□ 0.22
RTN4-202ENST00000337526 EPRSP07814 1512 aaKnown RBP16.45■□□□□ 0.22
RTN4-202ENST00000337526 SUPT6HQ7KZ85 1726 aaKnown RBP16.45■□□□□ 0.22
RTN4-202ENST00000337526 KIAA0586Q9BVV6 1533 aa16.45■□□□□ 0.22
RTN4-202ENST00000337526 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
RTN4-202ENST00000337526 OLFM4Q6UX06 510 aa16.44■□□□□ 0.22
RTN4-202ENST00000337526 MPNDQ8N594 471 aa16.44■□□□□ 0.22
RTN4-202ENST00000337526 HECW1Q76N89 1606 aa16.44■□□□□ 0.22
RTN4-202ENST00000337526 SSH1Q8WYL5 1049 aa16.43■□□□□ 0.22
RTN4-202ENST00000337526 RAD21O60216 631 aa16.43■□□□□ 0.22
RTN4-202ENST00000337526 NSD3Q9BZ95 1437 aa16.43■□□□□ 0.22
RTN4-202ENST00000337526 CEBPZQ03701 1054 aaKnown RBP16.42■□□□□ 0.22
RTN4-202ENST00000337526 CDK13Q14004 1512 aaKnown RBP16.42■□□□□ 0.22
RTN4-202ENST00000337526 NCOA1Q15788 1441 aa16.42■□□□□ 0.22
RTN4-202ENST00000337526 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
RTN4-202ENST00000337526 PDILTQ8N807 584 aa16.42■□□□□ 0.22
RTN4-202ENST00000337526 SPC24Q8NBT2 197 aa16.42■□□□□ 0.22
RTN4-202ENST00000337526 CCDC192P0DO97 292 aa16.42■□□□□ 0.22
RTN4-202ENST00000337526 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
RTN4-202ENST00000337526 RPGRIP1LQ68CZ1 1315 aa16.42■□□□□ 0.22
RTN4-202ENST00000337526 ATAD2Q6PL18 1390 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms