RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 MFAP1P55081 439 aaKnown RBP12.34□□□□□ -0.43
MSL3-202ENST00000337339 COG3Q96JB2 828 aa12.34□□□□□ -0.43
MSL3-202ENST00000337339 SLC26A8Q96RN1 970 aa12.34□□□□□ -0.43
MSL3-202ENST00000337339 PNNQ9H307 717 aaKnown RBP12.34□□□□□ -0.43
MSL3-202ENST00000337339 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
MSL3-202ENST00000337339 NFKBIBQ15653 356 aa12.34□□□□□ -0.43
MSL3-202ENST00000337339 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
MSL3-202ENST00000337339 NRXN1Q9ULB1 1477 aa12.34□□□□□ -0.43
MSL3-202ENST00000337339 NEO1Q92859 1461 aa12.34□□□□□ -0.43
MSL3-202ENST00000337339 CEBPAP49715 358 aaPredicted RBP12.34□□□□□ -0.43
MSL3-202ENST00000337339 TMEM57Q8N5G2 664 aa12.34□□□□□ -0.43
MSL3-202ENST00000337339 LMTK2Q8IWU2 1503 aa12.33□□□□□ -0.43
MSL3-202ENST00000337339 ATF7IPQ6VMQ6 1270 aa12.33□□□□□ -0.44
MSL3-202ENST00000337339 NUDT16Q96DE0 195 aaKnown RBP12.33□□□□□ -0.44
MSL3-202ENST00000337339 ADGRB1O14514 1584 aa12.33□□□□□ -0.44
MSL3-202ENST00000337339 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
MSL3-202ENST00000337339 IPO8O15397 1037 aaKnown RBP12.32□□□□□ -0.44
MSL3-202ENST00000337339 CCDC27Q2M243 656 aa12.32□□□□□ -0.44
MSL3-202ENST00000337339 LNPKQ9C0E8 428 aa12.32□□□□□ -0.44
MSL3-202ENST00000337339 C14orf37Q86TY3 774 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 PLEKHF1Q96S99 279 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 ABCC11Q96J66 1382 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 APBB1O00213 710 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
MSL3-202ENST00000337339 FRAT2O75474 233 aaPredicted RBP12.31□□□□□ -0.44
MSL3-202ENST00000337339 DDX19BQ9UMR2 479 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 GLI2P10070 1586 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 NSD2O96028 1365 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 TULP4Q9NRJ4 1543 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 BECN1Q14457 450 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
MSL3-202ENST00000337339 QRICH2Q9H0J4 1663 aa12.31□□□□□ -0.44
MSL3-202ENST00000337339 FCHSD2O94868 740 aa12.3□□□□□ -0.44
MSL3-202ENST00000337339 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
MSL3-202ENST00000337339 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
MSL3-202ENST00000337339 TSPYL6Q8N831 410 aa12.29□□□□□ -0.44
MSL3-202ENST00000337339 CCDC61Q9Y6R9 512 aa12.29□□□□□ -0.44
MSL3-202ENST00000337339 KIAA1210Q9ULL0 1709 aa12.29□□□□□ -0.44
MSL3-202ENST00000337339 KCNA4P22459 653 aa12.29□□□□□ -0.44
MSL3-202ENST00000337339 ANKRD45Q5TZF3 282 aa12.28□□□□□ -0.44
MSL3-202ENST00000337339 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
MSL3-202ENST00000337339 SULT6B1Q6IMI4 303 aa12.28□□□□□ -0.44
MSL3-202ENST00000337339 DIP2CQ9Y2E4 1556 aa12.28□□□□□ -0.44
MSL3-202ENST00000337339 SETBP1Q9Y6X0 1596 aa12.28□□□□□ -0.44
MSL3-202ENST00000337339 RIMS2Q9UQ26 1411 aa12.27□□□□□ -0.44
MSL3-202ENST00000337339 NEXMIFQ5QGS0 1516 aa12.27□□□□□ -0.44
MSL3-202ENST00000337339 NINLQ9Y2I6 1382 aa12.27□□□□□ -0.45
MSL3-202ENST00000337339 NFE2L2Q16236 605 aa12.27□□□□□ -0.45
MSL3-202ENST00000337339 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.45
MSL3-202ENST00000337339 RSPH6AQ9H0K4 717 aa12.27□□□□□ -0.45
MSL3-202ENST00000337339 CFAP74Q9C0B2 1584 aa12.27□□□□□ -0.45
MSL3-202ENST00000337339 CAMSAP1Q5T5Y3 1602 aa12.26□□□□□ -0.45
MSL3-202ENST00000337339 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.26□□□□□ -0.45
MSL3-202ENST00000337339 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
MSL3-202ENST00000337339 TSPOAP1O95153 1857 aa12.26□□□□□ -0.45
MSL3-202ENST00000337339 METP08581 1390 aa12.26□□□□□ -0.45
MSL3-202ENST00000337339 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
MSL3-202ENST00000337339 NGDNQ8NEJ9 315 aaKnown RBP12.25□□□□□ -0.45
MSL3-202ENST00000337339 LTV1Q96GA3 475 aaPredicted RBP12.25□□□□□ -0.45
MSL3-202ENST00000337339 USP35Q9P2H5 1018 aa12.25□□□□□ -0.45
MSL3-202ENST00000337339 KIF16BQ96L93 1317 aa12.25□□□□□ -0.45
MSL3-202ENST00000337339 KRT24Q2M2I5 525 aa12.25□□□□□ -0.45
MSL3-202ENST00000337339 MCM10Q7L590 875 aa12.25□□□□□ -0.45
MSL3-202ENST00000337339 ARHGAP31Q2M1Z3 1444 aa12.25□□□□□ -0.45
MSL3-202ENST00000337339 PPIP5K1Q6PFW1 1433 aa12.25□□□□□ -0.45
MSL3-202ENST00000337339 PPLO60437 1756 aa12.25□□□□□ -0.45
MSL3-202ENST00000337339 MBIPQ9NS73 344 aa12.24□□□□□ -0.45
MSL3-202ENST00000337339 SIGLEC1Q9BZZ2 1709 aa12.24□□□□□ -0.45
MSL3-202ENST00000337339 ZMYM3Q14202 1370 aa12.24□□□□□ -0.45
MSL3-202ENST00000337339 GNAI1P63096 354 aa12.24□□□□□ -0.45
MSL3-202ENST00000337339 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
MSL3-202ENST00000337339 CT47B1P0C2W7 299 aaPredicted RBP12.23□□□□□ -0.45
MSL3-202ENST00000337339 CALD1Q05682 793 aaKnown RBP12.23□□□□□ -0.45
MSL3-202ENST00000337339 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
MSL3-202ENST00000337339 C8orf58Q8NAV2 365 aa12.23□□□□□ -0.45
MSL3-202ENST00000337339 NECTIN2Q92692 538 aa12.23□□□□□ -0.45
MSL3-202ENST00000337339 PIK3C2BO00750 1634 aa12.23□□□□□ -0.45
MSL3-202ENST00000337339 HSP90AA1P07900 732 aaKnown RBP12.23□□□□□ -0.45
MSL3-202ENST00000337339 GSE1Q14687 1217 aa12.23□□□□□ -0.45
MSL3-202ENST00000337339 SLC4A10Q6U841 1118 aa12.23□□□□□ -0.45
MSL3-202ENST00000337339 C22orf23Q9BZE7 217 aa12.23□□□□□ -0.45
MSL3-202ENST00000337339 FOXD4L1Q9NU39 408 aa12.23□□□□□ -0.45
MSL3-202ENST00000337339 PTPRMP28827 1452 aa12.22□□□□□ -0.45
MSL3-202ENST00000337339 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
MSL3-202ENST00000337339 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
MSL3-202ENST00000337339 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
MSL3-202ENST00000337339 AAMPQ13685 434 aa12.22□□□□□ -0.45
MSL3-202ENST00000337339 EID1Q9Y6B2 187 aa12.22□□□□□ -0.45
MSL3-202ENST00000337339 VAMP4O75379 141 aa12.21□□□□□ -0.45
MSL3-202ENST00000337339 IL13P35225 146 aa12.21□□□□□ -0.45
MSL3-202ENST00000337339 AMPHP49418 695 aa12.21□□□□□ -0.45
MSL3-202ENST00000337339 GZF1Q9H116 711 aaPredicted RBP12.21□□□□□ -0.45
MSL3-202ENST00000337339 IFT172Q9UG01 1749 aa12.21□□□□□ -0.46
MSL3-202ENST00000337339 USP19O94966 1318 aa12.21□□□□□ -0.46
MSL3-202ENST00000337339 ACEP12821 1306 aa12.21□□□□□ -0.46
MSL3-202ENST00000337339 ZBTB40Q9NUA8 1239 aa12.21□□□□□ -0.46
MSL3-202ENST00000337339 ZFYVE9O95405 1425 aa12.2□□□□□ -0.46
MSL3-202ENST00000337339 LTKP29376 864 aa12.2□□□□□ -0.46
MSL3-202ENST00000337339 IQSEC2Q5JU85 1478 aa12.2□□□□□ -0.46
MSL3-202ENST00000337339 RTF1Q92541 710 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms