RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 PPARDQ03181 441 aa9.59□□□□□ -0.87
TNPO1-201ENST00000337273 GOLGA6L7A0A1B0GV03 622 aa9.59□□□□□ -0.87
TNPO1-201ENST00000337273 KINO60870 393 aaKnown RBP9.59□□□□□ -0.87
TNPO1-201ENST00000337273 EIF3JO75822 258 aaKnown RBP9.59□□□□□ -0.87
TNPO1-201ENST00000337273 FKBP5Q13451 457 aaPredicted RBP9.59□□□□□ -0.87
TNPO1-201ENST00000337273 JMYQ8N9B5 988 aa9.59□□□□□ -0.87
TNPO1-201ENST00000337273 RRP9O43818 475 aaKnown RBP9.59□□□□□ -0.88
TNPO1-201ENST00000337273 SDF4Q9BRK5 362 aa9.59□□□□□ -0.88
TNPO1-201ENST00000337273 FAM193AP78312 1265 aa9.58□□□□□ -0.88
TNPO1-201ENST00000337273 ERC1Q8IUD2 1116 aa9.58□□□□□ -0.88
TNPO1-201ENST00000337273 ERLIN1O75477 346 aa9.58□□□□□ -0.88
TNPO1-201ENST00000337273 ODF2Q5BJF6 829 aa9.58□□□□□ -0.88
TNPO1-201ENST00000337273 RRBP1Q9P2E9 1410 aaKnown RBP9.58□□□□□ -0.88
TNPO1-201ENST00000337273 NFXL1Q6ZNB6 911 aa9.58□□□□□ -0.88
TNPO1-201ENST00000337273 TRIM34Q9BYJ4 488 aa9.58□□□□□ -0.88
TNPO1-201ENST00000337273 CEBPZQ03701 1054 aaKnown RBP9.58□□□□□ -0.88
TNPO1-201ENST00000337273 SART3Q15020 963 aaKnown RBP9.58□□□□□ -0.88
TNPO1-201ENST00000337273 CCDC192P0DO97 292 aa9.58□□□□□ -0.88
TNPO1-201ENST00000337273 CAGE1Q8TC20 777 aa9.58□□□□□ -0.88
TNPO1-201ENST00000337273 FGD6Q6ZV73 1430 aa9.58□□□□□ -0.88
TNPO1-201ENST00000337273 TDRD9Q8NDG6 1382 aaKnown RBP9.57□□□□□ -0.88
TNPO1-201ENST00000337273 ZRSR2Q15696 482 aaKnown RBP9.57□□□□□ -0.88
TNPO1-201ENST00000337273 DDX54Q8TDD1 881 aaKnown RBP9.57□□□□□ -0.88
TNPO1-201ENST00000337273 TRIM5Q9C035 493 aa9.57□□□□□ -0.88
TNPO1-201ENST00000337273 IQCEQ6IPM2 695 aa9.57□□□□□ -0.88
TNPO1-201ENST00000337273 ERLIN2O94905 339 aa9.57□□□□□ -0.88
TNPO1-201ENST00000337273 EPS15P42566 896 aa9.57□□□□□ -0.88
TNPO1-201ENST00000337273 APPP05067 770 aa9.57□□□□□ -0.88
TNPO1-201ENST00000337273 FYCO1Q9BQS8 1478 aa9.57□□□□□ -0.88
TNPO1-201ENST00000337273 PPFIA3O75145 1194 aa9.57□□□□□ -0.88
TNPO1-201ENST00000337273 CT47A1Q5JQC4 288 aaPredicted RBP9.57□□□□□ -0.88
TNPO1-201ENST00000337273 TXLNAP40222 546 aa9.56□□□□□ -0.88
TNPO1-201ENST00000337273 PAXIP1Q6ZW49 1069 aaPredicted RBP9.56□□□□□ -0.88
TNPO1-201ENST00000337273 CLASRPQ8N2M8 674 aaKnown RBP9.56□□□□□ -0.88
TNPO1-201ENST00000337273 NAP1L1P55209 391 aaKnown RBP9.56□□□□□ -0.88
TNPO1-201ENST00000337273 LNPKQ9C0E8 428 aa9.56□□□□□ -0.88
TNPO1-201ENST00000337273 WDR33Q9C0J8 1336 aaKnown RBP9.56□□□□□ -0.88
TNPO1-201ENST00000337273 OFD1O75665 1012 aa9.56□□□□□ -0.88
TNPO1-201ENST00000337273 HSP90AB3PQ58FF7 597 aa9.56□□□□□ -0.88
TNPO1-201ENST00000337273 CBFA2T2O43439 604 aa9.56□□□□□ -0.88
TNPO1-201ENST00000337273 TSPYL1Q9H0U9 437 aa9.56□□□□□ -0.88
TNPO1-201ENST00000337273 SRCIN1Q9C0H9 1055 aa9.56□□□□□ -0.88
TNPO1-201ENST00000337273 CGNQ9P2M7 1197 aaKnown RBP9.55□□□□□ -0.88
TNPO1-201ENST00000337273 GOLGA6L10A6NI86 522 aa9.55□□□□□ -0.88
TNPO1-201ENST00000337273 CCDC30Q5VVM6 783 aa9.55□□□□□ -0.88
TNPO1-201ENST00000337273 CTDP1Q9Y5B0 961 aaPredicted RBP9.55□□□□□ -0.88
TNPO1-201ENST00000337273 DTNBO60941 627 aa9.55□□□□□ -0.88
TNPO1-201ENST00000337273 UBTFL1P0CB47 393 aaPredicted RBP9.55□□□□□ -0.88
TNPO1-201ENST00000337273 ANKRD18AQ8IVF6 992 aa9.55□□□□□ -0.88
TNPO1-201ENST00000337273 JPH4Q96JJ6 628 aa9.55□□□□□ -0.88
TNPO1-201ENST00000337273 CCDC43Q96MW1 224 aaKnown RBP9.55□□□□□ -0.88
TNPO1-201ENST00000337273 KIF2AO00139 706 aaPredicted RBP9.55□□□□□ -0.88
TNPO1-201ENST00000337273 VPS37DQ86XT2 251 aa9.55□□□□□ -0.88
TNPO1-201ENST00000337273 RUSC2Q8N2Y8 1516 aa9.54□□□□□ -0.88
TNPO1-201ENST00000337273 KIF21BO75037 1637 aa9.54□□□□□ -0.88
TNPO1-201ENST00000337273 ZNHIT6Q9NWK9 470 aaKnown RBP9.54□□□□□ -0.88
TNPO1-201ENST00000337273 MAGEC2Q9UBF1 373 aaPredicted RBP9.54□□□□□ -0.88
TNPO1-201ENST00000337273 MTMR7Q9Y216 660 aa9.54□□□□□ -0.88
TNPO1-201ENST00000337273 FAM177A1Q8N128 213 aaPredicted RBP9.54□□□□□ -0.88
TNPO1-201ENST00000337273 LARP6Q9BRS8 491 aaKnown RBP9.54□□□□□ -0.88
TNPO1-201ENST00000337273 SMARCA4P51532 1647 aa9.54□□□□□ -0.88
TNPO1-201ENST00000337273 PDILTQ8N807 584 aa9.54□□□□□ -0.88
TNPO1-201ENST00000337273 HFM1A2PYH4 1435 aa9.54□□□□□ -0.88
TNPO1-201ENST00000337273 LRRC9Q6ZRR7 1453 aa9.54□□□□□ -0.88
TNPO1-201ENST00000337273 TSPYL4Q9UJ04 414 aa9.53□□□□□ -0.88
TNPO1-201ENST00000337273 RBM27Q9P2N5 1060 aaKnown RBP9.53□□□□□ -0.88
TNPO1-201ENST00000337273 CFAP45Q9UL16 551 aa9.53□□□□□ -0.88
TNPO1-201ENST00000337273 SMG6Q86US8 1419 aaKnown RBP9.53□□□□□ -0.88
TNPO1-201ENST00000337273 K7ELQ4 463 aaPredicted RBP9.53□□□□□ -0.88
TNPO1-201ENST00000337273 KIAA0754O94854 1291 aa9.53□□□□□ -0.88
TNPO1-201ENST00000337273 CCDC112Q8NEF3 446 aa9.53□□□□□ -0.88
TNPO1-201ENST00000337273 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
TNPO1-201ENST00000337273 GRPEL1Q9HAV7 217 aa9.53□□□□□ -0.88
TNPO1-201ENST00000337273 HSP90AB2PQ58FF8 381 aa9.53□□□□□ -0.88
TNPO1-201ENST00000337273 ZNF830Q96NB3 372 aaPredicted RBP9.53□□□□□ -0.88
TNPO1-201ENST00000337273 GAS2L2Q8NHY3 880 aa9.53□□□□□ -0.88
TNPO1-201ENST00000337273 GBP3Q9H0R5 595 aa9.52□□□□□ -0.89
TNPO1-201ENST00000337273 PLEKHH2Q8IVE3 1493 aa9.52□□□□□ -0.89
TNPO1-201ENST00000337273 WDR63Q8IWG1 891 aa9.52□□□□□ -0.89
TNPO1-201ENST00000337273 DNAJC2Q99543 621 aaKnown RBP9.52□□□□□ -0.89
TNPO1-201ENST00000337273 ERICH3Q5RHP9 1530 aa9.52□□□□□ -0.89
TNPO1-201ENST00000337273 TBC1D2BQ9UPU7 963 aa9.52□□□□□ -0.89
TNPO1-201ENST00000337273 CERS3Q8IU89 383 aa9.52□□□□□ -0.89
TNPO1-201ENST00000337273 GPATCH11Q8N954 259 aa9.52□□□□□ -0.89
TNPO1-201ENST00000337273 SLC3A2P08195 630 aaKnown RBP9.52□□□□□ -0.89
TNPO1-201ENST00000337273 EIF2S2P20042 333 aaKnown RBP9.52□□□□□ -0.89
TNPO1-201ENST00000337273 KRT85P78386 507 aa9.52□□□□□ -0.89
TNPO1-201ENST00000337273 C20orf194Q5TEA3 1177 aa9.52□□□□□ -0.89
TNPO1-201ENST00000337273 MCM3P25205 808 aa9.51□□□□□ -0.89
TNPO1-201ENST00000337273 PRPF40AO75400 957 aaKnown RBP9.51□□□□□ -0.89
TNPO1-201ENST00000337273 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
TNPO1-201ENST00000337273 NEK4P51957 841 aa9.51□□□□□ -0.89
TNPO1-201ENST00000337273 PANK2Q9BZ23 570 aa9.51□□□□□ -0.89
TNPO1-201ENST00000337273 STIM1Q13586 685 aa9.51□□□□□ -0.89
TNPO1-201ENST00000337273 SMTNL1A8MU46 457 aa9.51□□□□□ -0.89
TNPO1-201ENST00000337273 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
TNPO1-201ENST00000337273 SYCP1Q15431 976 aa9.51□□□□□ -0.89
TNPO1-201ENST00000337273 ZSCAN31Q96LW9 406 aaPredicted RBP9.51□□□□□ -0.89
TNPO1-201ENST00000337273 CCAR1Q8IX12 1150 aaKnown RBP9.51□□□□□ -0.89
TNPO1-201ENST00000337273 CYP46A1Q9Y6A2 500 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms