RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 IL16Q14005 1332 aa27.37■■□□□ 1.97
PTDSS1-201ENST00000337004 MINK1Q8N4C8 1332 aaPredicted RBP27.36■■□□□ 1.97
PTDSS1-201ENST00000337004 MED14O60244 1454 aa27.36■■□□□ 1.97
PTDSS1-201ENST00000337004 HDGFL2Q7Z4V5 671 aaPredicted RBP27.35■■□□□ 1.97
PTDSS1-201ENST00000337004 PTPRMP28827 1452 aa27.34■■□□□ 1.97
PTDSS1-201ENST00000337004 SENP3Q9H4L4 574 aaPredicted RBP27.34■■□□□ 1.97
PTDSS1-201ENST00000337004 COL3A1P02461 1466 aaPredicted RBP27.34■■□□□ 1.97
PTDSS1-201ENST00000337004 DDX19BQ9UMR2 479 aa27.33■■□□□ 1.97
PTDSS1-201ENST00000337004 NLRP1Q9C000 1473 aa27.33■■□□□ 1.97
PTDSS1-201ENST00000337004 YTHDC2Q9H6S0 1430 aaKnown RBP27.33■■□□□ 1.97
PTDSS1-201ENST00000337004 DIAPH1O60610 1272 aaKnown RBP27.33■■□□□ 1.96
PTDSS1-201ENST00000337004 IL27Q8NEV9 243 aa27.33■■□□□ 1.96
PTDSS1-201ENST00000337004 TBC1D32Q96NH3 1257 aa27.33■■□□□ 1.96
PTDSS1-201ENST00000337004 TRIM27P14373 513 aa27.32■■□□□ 1.96
PTDSS1-201ENST00000337004 SSH1Q8WYL5 1049 aa27.32■■□□□ 1.96
PTDSS1-201ENST00000337004 RIPK4P57078 832 aa27.31■■□□□ 1.96
PTDSS1-201ENST00000337004 ATF7IPQ6VMQ6 1270 aa27.31■■□□□ 1.96
PTDSS1-201ENST00000337004 HDAC1Q13547 482 aaPredicted RBP27.3■■□□□ 1.96
PTDSS1-201ENST00000337004 ITPRIPQ8IWB1 547 aa27.29■■□□□ 1.96
PTDSS1-201ENST00000337004 YEATS2Q9ULM3 1422 aa27.29■■□□□ 1.96
PTDSS1-201ENST00000337004 CD163L1Q9NR16 1453 aa27.29■■□□□ 1.96
PTDSS1-201ENST00000337004 CDK19Q9BWU1 502 aa27.28■■□□□ 1.96
PTDSS1-201ENST00000337004 PNPLA6Q8IY17 1366 aa27.27■■□□□ 1.96
PTDSS1-201ENST00000337004 NOB1Q9ULX3 412 aaKnown RBP27.27■■□□□ 1.96
PTDSS1-201ENST00000337004 TMEM131LA2VDJ0 1609 aa27.27■■□□□ 1.96
PTDSS1-201ENST00000337004 IPO8O15397 1037 aaKnown RBP27.26■■□□□ 1.95
PTDSS1-201ENST00000337004 CABP1Q9NZU7 370 aa27.25■■□□□ 1.95
PTDSS1-201ENST00000337004 FCHSD2O94868 740 aa27.24■■□□□ 1.95
PTDSS1-201ENST00000337004 KIF16BQ96L93 1317 aa27.24■■□□□ 1.95
PTDSS1-201ENST00000337004 STAG3Q9UJ98 1225 aa27.23■■□□□ 1.95
PTDSS1-201ENST00000337004 RICTORQ6R327 1708 aa27.23■■□□□ 1.95
PTDSS1-201ENST00000337004 SLKQ9H2G2 1235 aaPredicted RBP27.22■■□□□ 1.95
PTDSS1-201ENST00000337004 CLTCQ00610 1675 aaKnown RBP27.22■■□□□ 1.95
PTDSS1-201ENST00000337004 PREX1Q8TCU6 1659 aa27.22■■□□□ 1.95
PTDSS1-201ENST00000337004 FBXO31Q5XUX0 539 aaPredicted RBP27.21■■□□□ 1.95
PTDSS1-201ENST00000337004 ALDH1L2Q3SY69 923 aa27.21■■□□□ 1.95
PTDSS1-201ENST00000337004 TMEM57Q8N5G2 664 aa27.2■■□□□ 1.95
PTDSS1-201ENST00000337004 ARHGEF40Q8TER5 1519 aa27.2■■□□□ 1.94
PTDSS1-201ENST00000337004 SMC5Q8IY18 1101 aa27.2■■□□□ 1.94
PTDSS1-201ENST00000337004 TBC1D2Q9BYX2 928 aa27.2■■□□□ 1.94
PTDSS1-201ENST00000337004 ANKRD26Q9UPS8 1709 aa27.2■■□□□ 1.94
PTDSS1-201ENST00000337004 ANTXR1Q9H6X2 564 aa27.19■■□□□ 1.94
PTDSS1-201ENST00000337004 ZBTB40Q9NUA8 1239 aa27.19■■□□□ 1.94
PTDSS1-201ENST00000337004 ALKQ9UM73 1620 aa27.18■■□□□ 1.94
PTDSS1-201ENST00000337004 ZNF428Q96B54 188 aa27.17■■□□□ 1.94
PTDSS1-201ENST00000337004 BRPF3Q9ULD4 1205 aa27.17■■□□□ 1.94
PTDSS1-201ENST00000337004 MYO5BQ9ULV0 1848 aa27.15■■□□□ 1.94
PTDSS1-201ENST00000337004 C22orf23Q9BZE7 217 aa27.15■■□□□ 1.94
PTDSS1-201ENST00000337004 PRKAR2BP31323 418 aa27.15■■□□□ 1.94
PTDSS1-201ENST00000337004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.14■■□□□ 1.94
PTDSS1-201ENST00000337004 RSPH6AQ9H0K4 717 aa27.14■■□□□ 1.94
PTDSS1-201ENST00000337004 POLKQ9UBT6 870 aa27.14■■□□□ 1.94
PTDSS1-201ENST00000337004 RTN4Q9NQC3 1192 aaKnown RBP27.14■■□□□ 1.93
PTDSS1-201ENST00000337004 BRPF1P55201 1214 aaPredicted RBP27.13■■□□□ 1.93
PTDSS1-201ENST00000337004 MFAP1P55081 439 aaKnown RBP27.12■■□□□ 1.93
PTDSS1-201ENST00000337004 CALD1Q05682 793 aaKnown RBP27.12■■□□□ 1.93
PTDSS1-201ENST00000337004 CDC42BPGQ6DT37 1551 aa27.11■■□□□ 1.93
PTDSS1-201ENST00000337004 PPP6R1Q9UPN7 881 aa27.11■■□□□ 1.93
PTDSS1-201ENST00000337004 FAM135BQ49AJ0 1406 aa27.1■■□□□ 1.93
PTDSS1-201ENST00000337004 ATP7BP35670 1465 aa27.1■■□□□ 1.93
PTDSS1-201ENST00000337004 CHMP4BQ9H444 224 aaKnown RBP27.09■■□□□ 1.93
PTDSS1-201ENST00000337004 NUCB1Q02818 461 aa27.09■■□□□ 1.93
PTDSS1-201ENST00000337004 NFE2L2Q16236 605 aa27.09■■□□□ 1.93
PTDSS1-201ENST00000337004 WAPLQ7Z5K2 1190 aa27.09■■□□□ 1.93
PTDSS1-201ENST00000337004 DLC1Q96QB1 1528 aa27.08■■□□□ 1.93
PTDSS1-201ENST00000337004 PPIP5K1Q6PFW1 1433 aa27.08■■□□□ 1.93
PTDSS1-201ENST00000337004 LRRC7Q96NW7 1537 aa27.07■■□□□ 1.92
PTDSS1-201ENST00000337004 FBLN1P23142 703 aa27.06■■□□□ 1.92
PTDSS1-201ENST00000337004 ARHGAP45Q92619 1136 aa27.05■■□□□ 1.92
PTDSS1-201ENST00000337004 KIF20BQ96Q89 1820 aa27.05■■□□□ 1.92
PTDSS1-201ENST00000337004 PHACTR3Q96KR7 559 aa27.05■■□□□ 1.92
PTDSS1-201ENST00000337004 HMOX1P09601 288 aa27.04■■□□□ 1.92
PTDSS1-201ENST00000337004 GNAI1P63096 354 aa27.04■■□□□ 1.92
PTDSS1-201ENST00000337004 VAMP4O75379 141 aa27.04■■□□□ 1.92
PTDSS1-201ENST00000337004 CHD1LQ86WJ1 897 aa27.04■■□□□ 1.92
PTDSS1-201ENST00000337004 IFT57Q9NWB7 429 aa27.03■■□□□ 1.92
PTDSS1-201ENST00000337004 MRPL50Q8N5N7 158 aaKnown RBP27.01■■□□□ 1.92
PTDSS1-201ENST00000337004 LNPKQ9C0E8 428 aa27.01■■□□□ 1.92
PTDSS1-201ENST00000337004 A2ML1A8K2U0 1454 aa27.01■■□□□ 1.91
PTDSS1-201ENST00000337004 RIMS2Q9UQ26 1411 aa27.01■■□□□ 1.91
PTDSS1-201ENST00000337004 ZBTB7BO15156 539 aaPredicted RBP27.01■■□□□ 1.91
PTDSS1-201ENST00000337004 IL13P35225 146 aa27■■□□□ 1.91
PTDSS1-201ENST00000337004 SPRYD3Q8NCJ5 442 aa27■■□□□ 1.91
PTDSS1-201ENST00000337004 EDC4Q6P2E9 1401 aaKnown RBP27■■□□□ 1.91
PTDSS1-201ENST00000337004 GCC1Q96CN9 775 aa27■■□□□ 1.91
PTDSS1-201ENST00000337004 CHMP5Q9NZZ3 219 aa27■■□□□ 1.91
PTDSS1-201ENST00000337004 EMILIN1Q9Y6C2 1016 aa27■■□□□ 1.91
PTDSS1-201ENST00000337004 WASLO00401 505 aaPredicted RBP26.99■■□□□ 1.91
PTDSS1-201ENST00000337004 HSCBQ8IWL3 235 aa26.99■■□□□ 1.91
PTDSS1-201ENST00000337004 LMOD3Q0VAK6 560 aa26.98■■□□□ 1.91
PTDSS1-201ENST00000337004 THUMPD2Q9BTF0 503 aaKnown RBP26.98■■□□□ 1.91
PTDSS1-201ENST00000337004 CPSF1Q10570 1443 aaKnown RBP26.98■■□□□ 1.91
PTDSS1-201ENST00000337004 AATKQ6ZMQ8 1374 aa26.97■■□□□ 1.91
PTDSS1-201ENST00000337004 PIK3R4Q99570 1358 aa26.97■■□□□ 1.91
PTDSS1-201ENST00000337004 ZNF853P0CG23 659 aa26.97■■□□□ 1.91
PTDSS1-201ENST00000337004 RBM25P49756 843 aaKnown RBP26.97■■□□□ 1.91
PTDSS1-201ENST00000337004 FAM69CQ0P6D2 419 aa26.96■■□□□ 1.91
PTDSS1-201ENST00000337004 NME9Q86XW9 330 aa26.96■■□□□ 1.91
PTDSS1-201ENST00000337004 BMP2KLQ5H9B9 411 aa26.95■■□□□ 1.91
PTDSS1-201ENST00000337004 L1TD1Q5T7N2 865 aaKnown RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms