RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 TNNQ9UQP3 1299 aa26.37■■□□□ 1.81
LINC01006-201ENST00000333319 DLC1Q96QB1 1528 aa26.37■■□□□ 1.81
LINC01006-201ENST00000333319 MAPK8IP3Q9UPT6 1336 aa26.37■■□□□ 1.81
LINC01006-201ENST00000333319 RLBP1P12271 317 aa26.36■■□□□ 1.81
LINC01006-201ENST00000333319 DIAPH1O60610 1272 aaKnown RBP26.35■■□□□ 1.81
LINC01006-201ENST00000333319 KIF20BQ96Q89 1820 aa26.34■■□□□ 1.81
LINC01006-201ENST00000333319 SETD1AO15047 1707 aaKnown RBP26.34■■□□□ 1.81
LINC01006-201ENST00000333319 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.34■■□□□ 1.81
LINC01006-201ENST00000333319 TSR2Q969E8 191 aaKnown RBP26.34■■□□□ 1.81
LINC01006-201ENST00000333319 TRIM35Q9UPQ4 493 aa26.34■■□□□ 1.81
LINC01006-201ENST00000333319 DDRGK1Q96HY6 314 aa26.33■■□□□ 1.81
LINC01006-201ENST00000333319 PNPLA6Q8IY17 1366 aa26.32■■□□□ 1.8
LINC01006-201ENST00000333319 AAMPQ13685 434 aa26.3■■□□□ 1.8
LINC01006-201ENST00000333319 ESF1Q9H501 851 aaKnown RBP26.3■■□□□ 1.8
LINC01006-201ENST00000333319 ATP7BP35670 1465 aa26.29■■□□□ 1.8
LINC01006-201ENST00000333319 CT47B1P0C2W7 299 aaPredicted RBP26.28■■□□□ 1.8
LINC01006-201ENST00000333319 RIPK4P57078 832 aa26.28■■□□□ 1.8
LINC01006-201ENST00000333319 EXOSC9Q06265 439 aaKnown RBP26.28■■□□□ 1.8
LINC01006-201ENST00000333319 FBLN1P23142 703 aa26.28■■□□□ 1.8
LINC01006-201ENST00000333319 ZMYM3Q14202 1370 aa26.28■■□□□ 1.8
LINC01006-201ENST00000333319 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.27■■□□□ 1.8
LINC01006-201ENST00000333319 PMFBP1Q8TBY8 1022 aa26.27■■□□□ 1.8
LINC01006-201ENST00000333319 PNNQ9H307 717 aaKnown RBP26.27■■□□□ 1.8
LINC01006-201ENST00000333319 PCDHB15Q9Y5E8 787 aa26.27■■□□□ 1.8
LINC01006-201ENST00000333319 PPM1GO15355 546 aaPredicted RBP26.27■■□□□ 1.8
LINC01006-201ENST00000333319 NRXN3Q9Y4C0 1643 aa26.27■■□□□ 1.8
LINC01006-201ENST00000333319 METP08581 1390 aa26.26■■□□□ 1.8
LINC01006-201ENST00000333319 ZKSCAN2Q63HK3 967 aa26.26■■□□□ 1.79
LINC01006-201ENST00000333319 POLKQ9UBT6 870 aa26.26■■□□□ 1.79
LINC01006-201ENST00000333319 WASLO00401 505 aaPredicted RBP26.25■■□□□ 1.79
LINC01006-201ENST00000333319 TXNDC2Q86VQ3 553 aa26.25■■□□□ 1.79
LINC01006-201ENST00000333319 LAS1LQ9Y4W2 734 aaKnown RBP26.25■■□□□ 1.79
LINC01006-201ENST00000333319 IL16Q14005 1332 aa26.24■■□□□ 1.79
LINC01006-201ENST00000333319 RTL5Q5HYW3 569 aaPredicted RBP26.24■■□□□ 1.79
LINC01006-201ENST00000333319 SMC4Q9NTJ3 1288 aa26.23■■□□□ 1.79
LINC01006-201ENST00000333319 FCHSD2O94868 740 aa26.23■■□□□ 1.79
LINC01006-201ENST00000333319 MVPQ14764 893 aaKnown RBP26.23■■□□□ 1.79
LINC01006-201ENST00000333319 FTSJ3Q8IY81 847 aaKnown RBP26.22■■□□□ 1.79
LINC01006-201ENST00000333319 DZIP1LQ8IYY4 767 aaKnown RBP26.22■■□□□ 1.79
LINC01006-201ENST00000333319 PPIP5K1Q6PFW1 1433 aa26.22■■□□□ 1.79
LINC01006-201ENST00000333319 DEKP35659 375 aaKnown RBP26.21■■□□□ 1.79
LINC01006-201ENST00000333319 KIF13AQ9H1H9 1805 aa26.21■■□□□ 1.79
LINC01006-201ENST00000333319 MAP2P11137 1827 aaKnown RBP26.2■■□□□ 1.79
LINC01006-201ENST00000333319 SSH1Q8WYL5 1049 aa26.2■■□□□ 1.78
LINC01006-201ENST00000333319 CPSF1Q10570 1443 aaKnown RBP26.2■■□□□ 1.78
LINC01006-201ENST00000333319 CDC42BPGQ6DT37 1551 aa26.19■■□□□ 1.78
LINC01006-201ENST00000333319 PRKAR2BP31323 418 aa26.19■■□□□ 1.78
LINC01006-201ENST00000333319 RSPH6AQ9H0K4 717 aa26.19■■□□□ 1.78
LINC01006-201ENST00000333319 LRRC7Q96NW7 1537 aa26.19■■□□□ 1.78
LINC01006-201ENST00000333319 EDC4Q6P2E9 1401 aaKnown RBP26.19■■□□□ 1.78
LINC01006-201ENST00000333319 HDGFP51858 240 aaKnown RBP26.18■■□□□ 1.78
LINC01006-201ENST00000333319 NME9Q86XW9 330 aa26.18■■□□□ 1.78
LINC01006-201ENST00000333319 NUDT16Q96DE0 195 aaKnown RBP26.18■■□□□ 1.78
LINC01006-201ENST00000333319 RWDD1Q9H446 243 aaPredicted RBP26.17■■□□□ 1.78
LINC01006-201ENST00000333319 SLC4A3P48751 1232 aa26.17■■□□□ 1.78
LINC01006-201ENST00000333319 NEFMP07197 916 aa26.16■■□□□ 1.78
LINC01006-201ENST00000333319 TRIM27P14373 513 aa26.16■■□□□ 1.78
LINC01006-201ENST00000333319 EMILIN1Q9Y6C2 1016 aa26.16■■□□□ 1.78
LINC01006-201ENST00000333319 NCKAP5LQ9HCH0 1330 aa26.16■■□□□ 1.78
LINC01006-201ENST00000333319 FAM135BQ49AJ0 1406 aa26.16■■□□□ 1.78
LINC01006-201ENST00000333319 VIRMAQ69YN4 1812 aaKnown RBP26.15■■□□□ 1.78
LINC01006-201ENST00000333319 TNRQ92752 1358 aa26.15■■□□□ 1.78
LINC01006-201ENST00000333319 DAXXQ9UER7 740 aaPredicted RBP26.15■■□□□ 1.78
LINC01006-201ENST00000333319 ZRANB1Q9UGI0 708 aa26.15■■□□□ 1.78
LINC01006-201ENST00000333319 HMOX1P09601 288 aa26.14■■□□□ 1.78
LINC01006-201ENST00000333319 PDZRN3Q9UPQ7 1066 aa26.14■■□□□ 1.77
LINC01006-201ENST00000333319 CCDC61Q9Y6R9 512 aa26.14■■□□□ 1.77
LINC01006-201ENST00000333319 ATF7IPQ6VMQ6 1270 aa26.13■■□□□ 1.77
LINC01006-201ENST00000333319 SIRT1Q96EB6 747 aa26.13■■□□□ 1.77
LINC01006-201ENST00000333319 NOB1Q9ULX3 412 aaKnown RBP26.13■■□□□ 1.77
LINC01006-201ENST00000333319 KNDC1Q76NI1 1749 aa26.12■■□□□ 1.77
LINC01006-201ENST00000333319 PHACTR3Q96KR7 559 aa26.12■■□□□ 1.77
LINC01006-201ENST00000333319 TECPR2O15040 1411 aa26.12■■□□□ 1.77
LINC01006-201ENST00000333319 ITPRIPQ8IWB1 547 aa26.11■■□□□ 1.77
LINC01006-201ENST00000333319 IL13P35225 146 aa26.1■■□□□ 1.77
LINC01006-201ENST00000333319 COG3Q96JB2 828 aa26.1■■□□□ 1.77
LINC01006-201ENST00000333319 NFE2L2Q16236 605 aa26.09■■□□□ 1.77
LINC01006-201ENST00000333319 DDX19BQ9UMR2 479 aa26.09■■□□□ 1.77
LINC01006-201ENST00000333319 TMEM2Q9UHN6 1383 aa26.09■■□□□ 1.77
LINC01006-201ENST00000333319 SEC24BO95487 1268 aa26.08■■□□□ 1.77
LINC01006-201ENST00000333319 CPS1P31327 1500 aa26.08■■□□□ 1.77
LINC01006-201ENST00000333319 AATKQ6ZMQ8 1374 aa26.08■■□□□ 1.77
LINC01006-201ENST00000333319 USP19O94966 1318 aa26.07■■□□□ 1.76
LINC01006-201ENST00000333319 CDK12Q9NYV4 1490 aaPredicted RBP26.07■■□□□ 1.76
LINC01006-201ENST00000333319 KIF16BQ96L93 1317 aa26.06■■□□□ 1.76
LINC01006-201ENST00000333319 MON2Q7Z3U7 1717 aa26.06■■□□□ 1.76
LINC01006-201ENST00000333319 RRS1Q15050 365 aaKnown RBP26.06■■□□□ 1.76
LINC01006-201ENST00000333319 USP35Q9P2H5 1018 aa26.06■■□□□ 1.76
LINC01006-201ENST00000333319 UBR1Q8IWV7 1749 aa26.06■■□□□ 1.76
LINC01006-201ENST00000333319 ALDH1L2Q3SY69 923 aa26.05■■□□□ 1.76
LINC01006-201ENST00000333319 TMEM57Q8N5G2 664 aa26.05■■□□□ 1.76
LINC01006-201ENST00000333319 PRR36Q9H6K5 1346 aa26.05■■□□□ 1.76
LINC01006-201ENST00000333319 IPO8O15397 1037 aaKnown RBP26.05■■□□□ 1.76
LINC01006-201ENST00000333319 THUMPD2Q9BTF0 503 aaKnown RBP26.05■■□□□ 1.76
LINC01006-201ENST00000333319 ROBO2Q9HCK4 1378 aa26.04■■□□□ 1.76
LINC01006-201ENST00000333319 ZNF692Q9BU19 519 aaPredicted RBP26.04■■□□□ 1.76
LINC01006-201ENST00000333319 AKAP12Q02952 1782 aa26.02■■□□□ 1.76
LINC01006-201ENST00000333319 HDAC1Q13547 482 aaPredicted RBP26.02■■□□□ 1.76
LINC01006-201ENST00000333319 ADAMTS13Q76LX8 1427 aa26.02■■□□□ 1.76
LINC01006-201ENST00000333319 ITSN1Q15811 1721 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms