RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 TMPOP42166 694 aaKnown RBP24.46■■□□□ 1.51
LAMP1-201ENST00000332556 ALKQ9UM73 1620 aa24.45■■□□□ 1.51
LAMP1-201ENST00000332556 TRIM35Q9UPQ4 493 aa24.45■■□□□ 1.5
LAMP1-201ENST00000332556 HDGFL2Q7Z4V5 671 aaPredicted RBP24.45■■□□□ 1.5
LAMP1-201ENST00000332556 PLEKHF1Q96S99 279 aa24.45■■□□□ 1.5
LAMP1-201ENST00000332556 WDR63Q8IWG1 891 aa24.44■■□□□ 1.5
LAMP1-201ENST00000332556 THUMPD2Q9BTF0 503 aaKnown RBP24.44■■□□□ 1.5
LAMP1-201ENST00000332556 RIPK4P57078 832 aa24.44■■□□□ 1.5
LAMP1-201ENST00000332556 MAPK8IP3Q9UPT6 1336 aa24.43■■□□□ 1.5
LAMP1-201ENST00000332556 CLTCQ00610 1675 aaKnown RBP24.43■■□□□ 1.5
LAMP1-201ENST00000332556 PDE3AQ14432 1141 aa24.43■■□□□ 1.5
LAMP1-201ENST00000332556 SEC24BO95487 1268 aa24.42■■□□□ 1.5
LAMP1-201ENST00000332556 NME9Q86XW9 330 aa24.41■■□□□ 1.5
LAMP1-201ENST00000332556 EMILIN1Q9Y6C2 1016 aa24.41■■□□□ 1.5
LAMP1-201ENST00000332556 ZFYVE9O95405 1425 aa24.41■■□□□ 1.5
LAMP1-201ENST00000332556 DIAPH1O60610 1272 aaKnown RBP24.41■■□□□ 1.5
LAMP1-201ENST00000332556 FRAT2O75474 233 aaPredicted RBP24.41■■□□□ 1.5
LAMP1-201ENST00000332556 ATAD2Q6PL18 1390 aa24.41■■□□□ 1.5
LAMP1-201ENST00000332556 DIP2BQ9P265 1576 aa24.4■■□□□ 1.5
LAMP1-201ENST00000332556 SMC4Q9NTJ3 1288 aa24.39■■□□□ 1.5
LAMP1-201ENST00000332556 NGEFQ8N5V2 710 aa24.39■■□□□ 1.49
LAMP1-201ENST00000332556 MYH16Q9H6N6 1097 aa24.39■■□□□ 1.49
LAMP1-201ENST00000332556 RIMS2Q9UQ26 1411 aa24.39■■□□□ 1.49
LAMP1-201ENST00000332556 PRKCSHP14314 528 aaPredicted RBP24.38■■□□□ 1.49
LAMP1-201ENST00000332556 PUS7Q96PZ0 661 aaKnown RBP24.38■■□□□ 1.49
LAMP1-201ENST00000332556 METP08581 1390 aa24.38■■□□□ 1.49
LAMP1-201ENST00000332556 USP32Q8NFA0 1604 aa24.38■■□□□ 1.49
LAMP1-201ENST00000332556 ESF1Q9H501 851 aaKnown RBP24.38■■□□□ 1.49
LAMP1-201ENST00000332556 NSD2O96028 1365 aa24.38■■□□□ 1.49
LAMP1-201ENST00000332556 RRS1Q15050 365 aaKnown RBP24.37■■□□□ 1.49
LAMP1-201ENST00000332556 A2ML1A8K2U0 1454 aa24.37■■□□□ 1.49
LAMP1-201ENST00000332556 PRKAR2BP31323 418 aa24.37■■□□□ 1.49
LAMP1-201ENST00000332556 SSH1Q8WYL5 1049 aa24.37■■□□□ 1.49
LAMP1-201ENST00000332556 PHACTR3Q96KR7 559 aa24.37■■□□□ 1.49
LAMP1-201ENST00000332556 ELL2O00472 640 aaPredicted RBP24.36■■□□□ 1.49
LAMP1-201ENST00000332556 POLKQ9UBT6 870 aa24.36■■□□□ 1.49
LAMP1-201ENST00000332556 NLRP1Q9C000 1473 aa24.36■■□□□ 1.49
LAMP1-201ENST00000332556 FTSJ3Q8IY81 847 aaKnown RBP24.36■■□□□ 1.49
LAMP1-201ENST00000332556 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
LAMP1-201ENST00000332556 SOX12O15370 315 aa24.35■■□□□ 1.49
LAMP1-201ENST00000332556 CCDC27Q2M243 656 aa24.35■■□□□ 1.49
LAMP1-201ENST00000332556 COL3A1P02461 1466 aaPredicted RBP24.33■■□□□ 1.49
LAMP1-201ENST00000332556 CEBPAP49715 358 aaPredicted RBP24.33■■□□□ 1.49
LAMP1-201ENST00000332556 NOB1Q9ULX3 412 aaKnown RBP24.32■■□□□ 1.48
LAMP1-201ENST00000332556 ITPRIPQ8IWB1 547 aa24.32■■□□□ 1.48
LAMP1-201ENST00000332556 TRIM27P14373 513 aa24.31■■□□□ 1.48
LAMP1-201ENST00000332556 PDZRN3Q9UPQ7 1066 aa24.31■■□□□ 1.48
LAMP1-201ENST00000332556 ZKSCAN2Q63HK3 967 aa24.3■■□□□ 1.48
LAMP1-201ENST00000332556 DZIP1LQ8IYY4 767 aaKnown RBP24.29■■□□□ 1.48
LAMP1-201ENST00000332556 WASLO00401 505 aaPredicted RBP24.28■■□□□ 1.48
LAMP1-201ENST00000332556 MVPQ14764 893 aaKnown RBP24.28■■□□□ 1.48
LAMP1-201ENST00000332556 ZMYM3Q14202 1370 aa24.28■■□□□ 1.48
LAMP1-201ENST00000332556 NUDT16Q96DE0 195 aaKnown RBP24.28■■□□□ 1.48
LAMP1-201ENST00000332556 NINLQ9Y2I6 1382 aa24.27■■□□□ 1.48
LAMP1-201ENST00000332556 PPIP5K1Q6PFW1 1433 aa24.27■■□□□ 1.48
LAMP1-201ENST00000332556 FAM83GA6ND36 823 aa24.27■■□□□ 1.48
LAMP1-201ENST00000332556 DCTN1Q14203 1278 aa24.27■■□□□ 1.48
LAMP1-201ENST00000332556 RSPH6AQ9H0K4 717 aa24.26■■□□□ 1.47
LAMP1-201ENST00000332556 TMEM57Q8N5G2 664 aa24.25■■□□□ 1.47
LAMP1-201ENST00000332556 SLC26A8Q96RN1 970 aa24.25■■□□□ 1.47
LAMP1-201ENST00000332556 ADGRB2O60241 1585 aa24.25■■□□□ 1.47
LAMP1-201ENST00000332556 TSPYL6Q8N831 410 aa24.24■■□□□ 1.47
LAMP1-201ENST00000332556 USP19O94966 1318 aa24.23■■□□□ 1.47
LAMP1-201ENST00000332556 PRR36Q9H6K5 1346 aa24.22■■□□□ 1.47
LAMP1-201ENST00000332556 PMFBP1Q8TBY8 1022 aa24.21■■□□□ 1.47
LAMP1-201ENST00000332556 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
LAMP1-201ENST00000332556 SLKQ9H2G2 1235 aaPredicted RBP24.2■■□□□ 1.47
LAMP1-201ENST00000332556 C1orf115Q9H7X2 142 aa24.2■■□□□ 1.47
LAMP1-201ENST00000332556 ATF7IPQ6VMQ6 1270 aa24.2■■□□□ 1.46
LAMP1-201ENST00000332556 MAP2P11137 1827 aaKnown RBP24.19■■□□□ 1.46
LAMP1-201ENST00000332556 PNPLA6Q8IY17 1366 aa24.19■■□□□ 1.46
LAMP1-201ENST00000332556 LTKP29376 864 aa24.18■■□□□ 1.46
LAMP1-201ENST00000332556 AEBP1Q8IUX7 1158 aa24.18■■□□□ 1.46
LAMP1-201ENST00000332556 CPS1P31327 1500 aa24.18■■□□□ 1.46
LAMP1-201ENST00000332556 FCHSD2O94868 740 aa24.18■■□□□ 1.46
LAMP1-201ENST00000332556 RWDD1Q9H446 243 aaPredicted RBP24.18■■□□□ 1.46
LAMP1-201ENST00000332556 SPATA31D1Q6ZQQ2 1576 aa24.18■■□□□ 1.46
LAMP1-201ENST00000332556 KIF20BQ96Q89 1820 aa24.17■■□□□ 1.46
LAMP1-201ENST00000332556 COG3Q96JB2 828 aa24.17■■□□□ 1.46
LAMP1-201ENST00000332556 IL13P35225 146 aa24.17■■□□□ 1.46
LAMP1-201ENST00000332556 NRXN3Q9Y4C0 1643 aa24.16■■□□□ 1.46
LAMP1-201ENST00000332556 CCDC61Q9Y6R9 512 aa24.16■■□□□ 1.46
LAMP1-201ENST00000332556 SPRYD3Q8NCJ5 442 aa24.15■■□□□ 1.46
LAMP1-201ENST00000332556 ANKRD26Q9UPS8 1709 aa24.15■■□□□ 1.46
LAMP1-201ENST00000332556 ROBO2Q9HCK4 1378 aa24.15■■□□□ 1.46
LAMP1-201ENST00000332556 SETD1AO15047 1707 aaKnown RBP24.14■■□□□ 1.46
LAMP1-201ENST00000332556 AGLP35573 1532 aa24.14■■□□□ 1.45
LAMP1-201ENST00000332556 KRT24Q2M2I5 525 aa24.14■■□□□ 1.45
LAMP1-201ENST00000332556 NFE2L2Q16236 605 aa24.13■■□□□ 1.45
LAMP1-201ENST00000332556 MED14O60244 1454 aa24.12■■□□□ 1.45
LAMP1-201ENST00000332556 TNRQ92752 1358 aa24.12■■□□□ 1.45
LAMP1-201ENST00000332556 MBIPQ9NS73 344 aa24.12■■□□□ 1.45
LAMP1-201ENST00000332556 PPP6R1Q9UPN7 881 aa24.11■■□□□ 1.45
LAMP1-201ENST00000332556 FAM135BQ49AJ0 1406 aa24.11■■□□□ 1.45
LAMP1-201ENST00000332556 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.11■■□□□ 1.45
LAMP1-201ENST00000332556 EIF5BO60841 1220 aaKnown RBP24.1■■□□□ 1.45
LAMP1-201ENST00000332556 CPSF1Q10570 1443 aaKnown RBP24.1■■□□□ 1.45
LAMP1-201ENST00000332556 C8orf58Q8NAV2 365 aa24.1■■□□□ 1.45
LAMP1-201ENST00000332556 ATP7BP35670 1465 aa24.09■■□□□ 1.45
LAMP1-201ENST00000332556 LNPKQ9C0E8 428 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms