RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NFKBIBQ15653 356 aa19.47■□□□□ 0.71
PTCH1-201ENST00000331920 WASHC2CQ9Y4E1 1318 aa19.47■□□□□ 0.71
PTCH1-201ENST00000331920 EIF3JO75822 258 aaKnown RBP19.47■□□□□ 0.71
PTCH1-201ENST00000331920 STIM1Q13586 685 aa19.47■□□□□ 0.71
PTCH1-201ENST00000331920 SSBP05455 408 aaKnown RBP eCLIP19.46■□□□□ 0.71
PTCH1-201ENST00000331920 SETD5Q9C0A6 1442 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 CNTROBQ8N137 903 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 RRP1P56182 461 aaKnown RBP19.46■□□□□ 0.71
PTCH1-201ENST00000331920 PODXL2Q9NZ53 605 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 C22orf23Q9BZE7 217 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 TBC1D2BQ9UPU7 963 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 TSPYL4Q9UJ04 414 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 E9PSI1 815 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 FIBPO43427 364 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 GOPCQ9HD26 462 aa19.46■□□□□ 0.71
PTCH1-201ENST00000331920 LETM1O95202 739 aaPredicted RBP19.45■□□□□ 0.7
PTCH1-201ENST00000331920 PANK3Q9H999 370 aa19.45■□□□□ 0.7
PTCH1-201ENST00000331920 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
PTCH1-201ENST00000331920 PRPF40AO75400 957 aaKnown RBP19.44■□□□□ 0.7
PTCH1-201ENST00000331920 RIPK4P57078 832 aa19.44■□□□□ 0.7
PTCH1-201ENST00000331920 MPHOSPH9Q99550 1183 aa19.44■□□□□ 0.7
PTCH1-201ENST00000331920 KIAA1328Q86T90 577 aa19.44■□□□□ 0.7
PTCH1-201ENST00000331920 PIBF1Q8WXW3 757 aa19.44■□□□□ 0.7
PTCH1-201ENST00000331920 COMMD10Q9Y6G5 202 aa19.44■□□□□ 0.7
PTCH1-201ENST00000331920 STK38Q15208 465 aa19.44■□□□□ 0.7
PTCH1-201ENST00000331920 PPM1EQ8WY54 764 aa19.44■□□□□ 0.7
PTCH1-201ENST00000331920 MYCNP04198 464 aaPredicted RBP19.43■□□□□ 0.7
PTCH1-201ENST00000331920 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
PTCH1-201ENST00000331920 PHLDB1Q86UU1 1377 aa19.43■□□□□ 0.7
PTCH1-201ENST00000331920 AEBP1Q8IUX7 1158 aa19.42■□□□□ 0.7
PTCH1-201ENST00000331920 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
PTCH1-201ENST00000331920 USP8P40818 1118 aa19.42■□□□□ 0.7
PTCH1-201ENST00000331920 KIF15Q9NS87 1388 aa19.42■□□□□ 0.7
PTCH1-201ENST00000331920 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
PTCH1-201ENST00000331920 SMC1AQ14683 1233 aaKnown RBP19.41■□□□□ 0.7
PTCH1-201ENST00000331920 ZNF396Q96N95 335 aaPredicted RBP19.41■□□□□ 0.7
PTCH1-201ENST00000331920 ERLIN1O75477 346 aa19.41■□□□□ 0.7
PTCH1-201ENST00000331920 HMOX1P09601 288 aa19.41■□□□□ 0.7
PTCH1-201ENST00000331920 JAKMIP3Q5VZ66 844 aa19.41■□□□□ 0.7
PTCH1-201ENST00000331920 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
PTCH1-201ENST00000331920 TTC39AQ5SRH9 613 aa19.4■□□□□ 0.7
PTCH1-201ENST00000331920 NUP133Q8WUM0 1156 aa19.4■□□□□ 0.7
PTCH1-201ENST00000331920 MINK1Q8N4C8 1332 aaPredicted RBP19.4■□□□□ 0.7
PTCH1-201ENST00000331920 GPATCH11Q8N954 259 aa19.4■□□□□ 0.7
PTCH1-201ENST00000331920 ERC1Q8IUD2 1116 aa19.4■□□□□ 0.7
PTCH1-201ENST00000331920 ME1P48163 572 aa19.39■□□□□ 0.69
PTCH1-201ENST00000331920 IQCEQ6IPM2 695 aa19.39■□□□□ 0.69
PTCH1-201ENST00000331920 RSPH4AQ5TD94 716 aa19.39■□□□□ 0.69
PTCH1-201ENST00000331920 NUTM2GQ5VZR2 741 aa19.39■□□□□ 0.69
PTCH1-201ENST00000331920 TRIM21P19474 475 aaKnown RBP19.39■□□□□ 0.69
PTCH1-201ENST00000331920 PIP4K2AP48426 406 aaPredicted RBP19.39■□□□□ 0.69
PTCH1-201ENST00000331920 TMCO5BA8MYB1 307 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 UBTFL1P0CB47 393 aaPredicted RBP19.38■□□□□ 0.69
PTCH1-201ENST00000331920 MRE11P49959 708 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 KIF6Q6ZMV9 814 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 ZNF76P36508 570 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 TRAK2O60296 914 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 PLCD3Q8N3E9 789 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 TXLNBQ8N3L3 684 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 UQCRHLA0A096LP55 91 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 UQCRHP07919 91 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 TNMDQ9H2S6 317 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 MYBBP1AQ9BQG0 1328 aaKnown RBP19.38■□□□□ 0.69
PTCH1-201ENST00000331920 TMCO3Q6UWJ1 677 aa19.38■□□□□ 0.69
PTCH1-201ENST00000331920 TMEM87AQ8NBN3 555 aa19.37■□□□□ 0.69
PTCH1-201ENST00000331920 CNNM1Q9NRU3 951 aa19.37■□□□□ 0.69
PTCH1-201ENST00000331920 CCDC69A6NI79 296 aa19.37■□□□□ 0.69
PTCH1-201ENST00000331920 CTNNBL1Q8WYA6 563 aaPredicted RBP19.37■□□□□ 0.69
PTCH1-201ENST00000331920 MAP4K4O95819 1239 aaPredicted RBP19.37■□□□□ 0.69
PTCH1-201ENST00000331920 APAF1O14727 1248 aa19.36■□□□□ 0.69
PTCH1-201ENST00000331920 EEA1Q15075 1411 aa19.36■□□□□ 0.69
PTCH1-201ENST00000331920 KIF7Q2M1P5 1343 aa19.36■□□□□ 0.69
PTCH1-201ENST00000331920 DNA2P51530 1060 aa19.35■□□□□ 0.69
PTCH1-201ENST00000331920 SPATA24Q86W54 205 aa19.35■□□□□ 0.69
PTCH1-201ENST00000331920 IPO4Q8TEX9 1081 aaKnown RBP19.35■□□□□ 0.69
PTCH1-201ENST00000331920 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
PTCH1-201ENST00000331920 HNRNPMP52272 730 aaKnown RBP eCLIP19.35■□□□□ 0.69
PTCH1-201ENST00000331920 ZSCAN29Q8IWY8 852 aaPredicted RBP19.35■□□□□ 0.69
PTCH1-201ENST00000331920 DACH1Q9UI36 760 aa19.35■□□□□ 0.69
PTCH1-201ENST00000331920 SCLT1Q96NL6 688 aa19.35■□□□□ 0.69
PTCH1-201ENST00000331920 ZNF526Q8TF50 670 aaPredicted RBP19.34■□□□□ 0.69
PTCH1-201ENST00000331920 GSTTP1A0A1W2PQM5 241 aa19.34■□□□□ 0.69
PTCH1-201ENST00000331920 TAF4BQ92750 862 aa19.34■□□□□ 0.69
PTCH1-201ENST00000331920 MACROD2A1Z1Q3 448 aa19.34■□□□□ 0.69
PTCH1-201ENST00000331920 ZWINTO95229 277 aa19.34■□□□□ 0.69
PTCH1-201ENST00000331920 USP5P45974 858 aa19.34■□□□□ 0.69
PTCH1-201ENST00000331920 API5Q9BZZ5 524 aaKnown RBP19.34■□□□□ 0.69
PTCH1-201ENST00000331920 CEP164Q9UPV0 1460 aa19.34■□□□□ 0.69
PTCH1-201ENST00000331920 TNNT1P13805 278 aa19.34■□□□□ 0.69
PTCH1-201ENST00000331920 RNF187Q5TA31 235 aaPredicted RBP19.33■□□□□ 0.69
PTCH1-201ENST00000331920 NEK4P51957 841 aa19.33■□□□□ 0.69
PTCH1-201ENST00000331920 CCDC178Q5BJE1 867 aa19.33■□□□□ 0.69
PTCH1-201ENST00000331920 SOGA3Q5TF21 947 aa19.33■□□□□ 0.69
PTCH1-201ENST00000331920 DIAPH1O60610 1272 aaKnown RBP19.33■□□□□ 0.68
PTCH1-201ENST00000331920 RAPGEF4Q8WZA2 1011 aa19.33■□□□□ 0.68
PTCH1-201ENST00000331920 EIF5P55010 431 aaKnown RBP19.32■□□□□ 0.68
PTCH1-201ENST00000331920 HOMER2Q9NSB8 354 aa19.32■□□□□ 0.68
PTCH1-201ENST00000331920 SPINK5Q9NQ38 1064 aaPredicted RBP19.32■□□□□ 0.68
PTCH1-201ENST00000331920 EVC2Q86UK5 1308 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms