RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TSPYL4Q9UJ04 414 aa16.96■□□□□ 0.31
EPHB3-201ENST00000330394 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
EPHB3-201ENST00000330394 ERC2O15083 957 aa16.95■□□□□ 0.3
EPHB3-201ENST00000330394 RLBP1P12271 317 aa16.95■□□□□ 0.3
EPHB3-201ENST00000330394 PLB1Q6P1J6 1458 aa16.95■□□□□ 0.3
EPHB3-201ENST00000330394 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
EPHB3-201ENST00000330394 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
EPHB3-201ENST00000330394 GORABQ5T7V8 394 aa16.94■□□□□ 0.3
EPHB3-201ENST00000330394 RUFY2Q8WXA3 655 aa16.94■□□□□ 0.3
EPHB3-201ENST00000330394 PLEKHH1Q9ULM0 1364 aa16.94■□□□□ 0.3
EPHB3-201ENST00000330394 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
EPHB3-201ENST00000330394 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
EPHB3-201ENST00000330394 STAC3Q96MF2 364 aa16.94■□□□□ 0.3
EPHB3-201ENST00000330394 C9orf78Q9NZ63 289 aaPredicted RBP16.94■□□□□ 0.3
EPHB3-201ENST00000330394 DNMBPQ6XZF7 1577 aa16.93■□□□□ 0.3
EPHB3-201ENST00000330394 IFIT2P09913 472 aaKnown RBP16.93■□□□□ 0.3
EPHB3-201ENST00000330394 ZNF428Q96B54 188 aa16.93■□□□□ 0.3
EPHB3-201ENST00000330394 FMNL2Q96PY5 1086 aa16.93■□□□□ 0.3
EPHB3-201ENST00000330394 CEBPZQ03701 1054 aaKnown RBP16.92■□□□□ 0.3
EPHB3-201ENST00000330394 KIF3AQ9Y496 699 aa16.92■□□□□ 0.3
EPHB3-201ENST00000330394 USP25Q9UHP3 1055 aa16.92■□□□□ 0.3
EPHB3-201ENST00000330394 SLC4A2P04920 1241 aa16.91■□□□□ 0.3
EPHB3-201ENST00000330394 TBC1D9Q6ZT07 1266 aa16.91■□□□□ 0.3
EPHB3-201ENST00000330394 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.91■□□□□ 0.3
EPHB3-201ENST00000330394 MCM2P49736 904 aa16.9■□□□□ 0.3
EPHB3-201ENST00000330394 EXOC6BQ9Y2D4 811 aa16.9■□□□□ 0.3
EPHB3-201ENST00000330394 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
EPHB3-201ENST00000330394 GOLGA6L1Q8N7Z2 621 aa16.9■□□□□ 0.3
EPHB3-201ENST00000330394 NSD3Q9BZ95 1437 aa16.89■□□□□ 0.3
EPHB3-201ENST00000330394 CT47B1P0C2W7 299 aaPredicted RBP16.89■□□□□ 0.29
EPHB3-201ENST00000330394 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
EPHB3-201ENST00000330394 IL1RAPL2Q9NP60 686 aa16.89■□□□□ 0.29
EPHB3-201ENST00000330394 PDCL2Q8N4E4 241 aa16.89■□□□□ 0.29
EPHB3-201ENST00000330394 LARP6Q9BRS8 491 aaKnown RBP16.89■□□□□ 0.29
EPHB3-201ENST00000330394 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.29
EPHB3-201ENST00000330394 ZNF830Q96NB3 372 aaPredicted RBP16.88■□□□□ 0.29
EPHB3-201ENST00000330394 SDF4Q9BRK5 362 aa16.88■□□□□ 0.29
EPHB3-201ENST00000330394 WDR33Q9C0J8 1336 aaKnown RBP16.88■□□□□ 0.29
EPHB3-201ENST00000330394 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
EPHB3-201ENST00000330394 DCTN1Q14203 1278 aa16.88■□□□□ 0.29
EPHB3-201ENST00000330394 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
EPHB3-201ENST00000330394 KLHL40Q2TBA0 621 aa16.88■□□□□ 0.29
EPHB3-201ENST00000330394 CCDC73Q6ZRK6 1079 aa16.88■□□□□ 0.29
EPHB3-201ENST00000330394 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
EPHB3-201ENST00000330394 MNS1Q8NEH6 495 aa16.88■□□□□ 0.29
EPHB3-201ENST00000330394 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
EPHB3-201ENST00000330394 PLEKHH2Q8IVE3 1493 aa16.87■□□□□ 0.29
EPHB3-201ENST00000330394 PES1O00541 588 aaKnown RBP16.87■□□□□ 0.29
EPHB3-201ENST00000330394 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
EPHB3-201ENST00000330394 DDX54Q8TDD1 881 aaKnown RBP16.87■□□□□ 0.29
EPHB3-201ENST00000330394 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
EPHB3-201ENST00000330394 HDAC5Q9UQL6 1122 aa16.87■□□□□ 0.29
EPHB3-201ENST00000330394 HECW1Q76N89 1606 aa16.87■□□□□ 0.29
EPHB3-201ENST00000330394 ARHGAP5Q13017 1502 aa16.86■□□□□ 0.29
EPHB3-201ENST00000330394 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
EPHB3-201ENST00000330394 TEFQ10587 303 aa16.86■□□□□ 0.29
EPHB3-201ENST00000330394 CCDC112Q8NEF3 446 aa16.86■□□□□ 0.29
EPHB3-201ENST00000330394 KDM2BQ8NHM5 1336 aa16.86■□□□□ 0.29
EPHB3-201ENST00000330394 GPRASP1Q5JY77 1395 aa16.86■□□□□ 0.29
EPHB3-201ENST00000330394 CCDC192P0DO97 292 aa16.85■□□□□ 0.29
EPHB3-201ENST00000330394 STK3Q13188 491 aa16.85■□□□□ 0.29
EPHB3-201ENST00000330394 ZSCAN23Q3MJ62 389 aa16.85■□□□□ 0.29
EPHB3-201ENST00000330394 FILIP1Q7Z7B0 1213 aa16.85■□□□□ 0.29
EPHB3-201ENST00000330394 URB2Q14146 1524 aaKnown RBP16.85■□□□□ 0.29
EPHB3-201ENST00000330394 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
EPHB3-201ENST00000330394 PRAM1Q96QH2 718 aa16.85■□□□□ 0.29
EPHB3-201ENST00000330394 TEX35Q5T0J7 233 aa16.85■□□□□ 0.29
EPHB3-201ENST00000330394 RNF20Q5VTR2 975 aa16.85■□□□□ 0.29
EPHB3-201ENST00000330394 GAS2L2Q8NHY3 880 aa16.85■□□□□ 0.29
EPHB3-201ENST00000330394 ERICH4A6NGS2 130 aa16.84■□□□□ 0.29
EPHB3-201ENST00000330394 CAMK4Q16566 473 aa16.84■□□□□ 0.29
EPHB3-201ENST00000330394 SULT6B1Q6IMI4 303 aa16.84■□□□□ 0.29
EPHB3-201ENST00000330394 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
EPHB3-201ENST00000330394 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
EPHB3-201ENST00000330394 LETM1O95202 739 aaPredicted RBP16.84■□□□□ 0.29
EPHB3-201ENST00000330394 BMP2KLQ5H9B9 411 aa16.84■□□□□ 0.29
EPHB3-201ENST00000330394 GNAI2P04899 355 aa16.83■□□□□ 0.29
EPHB3-201ENST00000330394 TPM3P06753 285 aa16.83■□□□□ 0.28
EPHB3-201ENST00000330394 PRIM1P49642 420 aaKnown RBP16.83■□□□□ 0.28
EPHB3-201ENST00000330394 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
EPHB3-201ENST00000330394 GNAI3P08754 354 aa16.82■□□□□ 0.28
EPHB3-201ENST00000330394 LRRCC1Q9C099 1032 aa16.82■□□□□ 0.28
EPHB3-201ENST00000330394 TNMDQ9H2S6 317 aa16.82■□□□□ 0.28
EPHB3-201ENST00000330394 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
EPHB3-201ENST00000330394 KDM4AO75164 1064 aa16.82■□□□□ 0.28
EPHB3-201ENST00000330394 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
EPHB3-201ENST00000330394 CHMP4AQ9BY43 222 aa16.82■□□□□ 0.28
EPHB3-201ENST00000330394 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
EPHB3-201ENST00000330394 CLASRPQ8N2M8 674 aaKnown RBP16.82■□□□□ 0.28
EPHB3-201ENST00000330394 SCAPERQ9BY12 1400 aa16.82■□□□□ 0.28
EPHB3-201ENST00000330394 LARP1BQ659C4 914 aaKnown RBP16.81■□□□□ 0.28
EPHB3-201ENST00000330394 TESK2Q96S53 571 aa16.81■□□□□ 0.28
EPHB3-201ENST00000330394 IGSF3O75054 1194 aa16.81■□□□□ 0.28
EPHB3-201ENST00000330394 TAF7LQ5H9L4 462 aa16.81■□□□□ 0.28
EPHB3-201ENST00000330394 CPLX1O14810 134 aa16.81■□□□□ 0.28
EPHB3-201ENST00000330394 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
EPHB3-201ENST00000330394 NUTM2GQ5VZR2 741 aa16.81■□□□□ 0.28
EPHB3-201ENST00000330394 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
EPHB3-201ENST00000330394 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
EPHB3-201ENST00000330394 AIMP1Q12904 312 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms