RNA–Protein interactions for RNA: ENST00000330331.9

RGPD6-202, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2 BASIC

Gene RGPD6, Length 2,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-202ENST00000330331 IQGAP3Q86VI3 1631 aa18.87■□□□□ 0.61
RGPD6-202ENST00000330331 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
RGPD6-202ENST00000330331 CBX1P83916 185 aa18.87■□□□□ 0.61
RGPD6-202ENST00000330331 MVPQ14764 893 aaKnown RBP18.87■□□□□ 0.61
RGPD6-202ENST00000330331 ZSCAN23Q3MJ62 389 aa18.87■□□□□ 0.61
RGPD6-202ENST00000330331 GAS2L2Q8NHY3 880 aa18.87■□□□□ 0.61
RGPD6-202ENST00000330331 A2MP01023 1474 aa18.86■□□□□ 0.61
RGPD6-202ENST00000330331 PDLIM2Q96JY6 352 aa18.86■□□□□ 0.61
RGPD6-202ENST00000330331 PRIM1P49642 420 aaKnown RBP18.86■□□□□ 0.61
RGPD6-202ENST00000330331 ZNF445P59923 1031 aa18.86■□□□□ 0.61
RGPD6-202ENST00000330331 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
RGPD6-202ENST00000330331 FTSJ3Q8IY81 847 aaKnown RBP18.85■□□□□ 0.61
RGPD6-202ENST00000330331 KIF2CQ99661 725 aa18.85■□□□□ 0.61
RGPD6-202ENST00000330331 IBTKQ9P2D0 1353 aaPredicted RBP18.85■□□□□ 0.61
RGPD6-202ENST00000330331 K7ELQ4 463 aaPredicted RBP18.84■□□□□ 0.61
RGPD6-202ENST00000330331 PPRC1Q5VV67 1664 aaKnown RBP18.84■□□□□ 0.61
RGPD6-202ENST00000330331 KIF13AQ9H1H9 1805 aa18.84■□□□□ 0.61
RGPD6-202ENST00000330331 MLH3Q9UHC1 1453 aa18.84■□□□□ 0.61
RGPD6-202ENST00000330331 RAPGEF3O95398 923 aa18.84■□□□□ 0.61
RGPD6-202ENST00000330331 RICTORQ6R327 1708 aa18.83■□□□□ 0.61
RGPD6-202ENST00000330331 RBM27Q9P2N5 1060 aaKnown RBP18.83■□□□□ 0.61
RGPD6-202ENST00000330331 ASXL1Q8IXJ9 1541 aa18.83■□□□□ 0.61
RGPD6-202ENST00000330331 GTF2E1P29083 439 aaPredicted RBP18.83■□□□□ 0.6
RGPD6-202ENST00000330331 PPP4R3BQ5MIZ7 849 aa18.83■□□□□ 0.6
RGPD6-202ENST00000330331 DEPDC5O75140 1603 aa18.82■□□□□ 0.6
RGPD6-202ENST00000330331 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
RGPD6-202ENST00000330331 EIF2AK4Q9P2K8 1649 aaKnown RBP18.81■□□□□ 0.6
RGPD6-202ENST00000330331 DZIP1LQ8IYY4 767 aaKnown RBP18.81■□□□□ 0.6
RGPD6-202ENST00000330331 DNTTIP2Q5QJE6 756 aaKnown RBP18.81■□□□□ 0.6
RGPD6-202ENST00000330331 LNPKQ9C0E8 428 aa18.81■□□□□ 0.6
RGPD6-202ENST00000330331 NGEFQ8N5V2 710 aa18.8■□□□□ 0.6
RGPD6-202ENST00000330331 FAM177BA6PVY3 158 aa18.8■□□□□ 0.6
RGPD6-202ENST00000330331 KIF3BO15066 747 aa18.79■□□□□ 0.6
RGPD6-202ENST00000330331 ZKSCAN2Q63HK3 967 aa18.79■□□□□ 0.6
RGPD6-202ENST00000330331 BCL11BQ9C0K0 894 aaPredicted RBP18.79■□□□□ 0.6
RGPD6-202ENST00000330331 ABCA6Q8N139 1617 aa18.79■□□□□ 0.6
RGPD6-202ENST00000330331 STAC3Q96MF2 364 aa18.79■□□□□ 0.6
RGPD6-202ENST00000330331 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
RGPD6-202ENST00000330331 LMBRD1Q9NUN5 540 aa18.78■□□□□ 0.6
RGPD6-202ENST00000330331 CCDC39Q9UFE4 941 aa18.78■□□□□ 0.6
RGPD6-202ENST00000330331 ZNF710Q8N1W2 664 aa18.78■□□□□ 0.6
RGPD6-202ENST00000330331 TCP11L2Q8N4U5 519 aa18.78■□□□□ 0.6
RGPD6-202ENST00000330331 MPNDQ8N594 471 aa18.78■□□□□ 0.6
RGPD6-202ENST00000330331 MCM5P33992 734 aa18.77■□□□□ 0.6
RGPD6-202ENST00000330331 CLEC17AQ6ZS10 378 aa18.77■□□□□ 0.6
RGPD6-202ENST00000330331 RNF214Q8ND24 703 aa18.77■□□□□ 0.6
RGPD6-202ENST00000330331 AK9Q5TCS8 1911 aa18.77■□□□□ 0.6
RGPD6-202ENST00000330331 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.59
RGPD6-202ENST00000330331 ATP2B3Q16720 1220 aa18.77■□□□□ 0.59
RGPD6-202ENST00000330331 PRPF40AO75400 957 aaKnown RBP18.76■□□□□ 0.59
RGPD6-202ENST00000330331 MYRIPQ8NFW9 859 aa18.76■□□□□ 0.59
RGPD6-202ENST00000330331 FRMPD1Q5SYB0 1578 aa18.76■□□□□ 0.59
RGPD6-202ENST00000330331 LAMC1P11047 1609 aa18.76■□□□□ 0.59
RGPD6-202ENST00000330331 PTMAP06454 111 aaKnown RBP18.76■□□□□ 0.59
RGPD6-202ENST00000330331 MROH1Q8NDA8 1641 aa18.75■□□□□ 0.59
RGPD6-202ENST00000330331 PKP1Q13835 747 aa18.75■□□□□ 0.59
RGPD6-202ENST00000330331 PLA2R1Q13018 1463 aa18.75■□□□□ 0.59
RGPD6-202ENST00000330331 IGSF3O75054 1194 aa18.75■□□□□ 0.59
RGPD6-202ENST00000330331 GTPBP4Q9BZE4 634 aaKnown RBP18.75■□□□□ 0.59
RGPD6-202ENST00000330331 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
RGPD6-202ENST00000330331 CHAMP1Q96JM3 812 aa18.74■□□□□ 0.59
RGPD6-202ENST00000330331 SYCE3A1L190 88 aa18.74■□□□□ 0.59
RGPD6-202ENST00000330331 GPT2Q8TD30 523 aa18.74■□□□□ 0.59
RGPD6-202ENST00000330331 VWDEQ8N2E2 1590 aa18.74■□□□□ 0.59
RGPD6-202ENST00000330331 SPDYE4A6NLX3 237 aa18.73■□□□□ 0.59
RGPD6-202ENST00000330331 DIP2CQ9Y2E4 1556 aa18.73■□□□□ 0.59
RGPD6-202ENST00000330331 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
RGPD6-202ENST00000330331 KANK1Q14678 1352 aa18.72■□□□□ 0.59
RGPD6-202ENST00000330331 KIF20AO95235 890 aa18.72■□□□□ 0.59
RGPD6-202ENST00000330331 KIAA2012Q0VF49 1180 aa18.72■□□□□ 0.59
RGPD6-202ENST00000330331 SMC4Q9NTJ3 1288 aa18.72■□□□□ 0.59
RGPD6-202ENST00000330331 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.72■□□□□ 0.59
RGPD6-202ENST00000330331 TRIM27P14373 513 aa18.72■□□□□ 0.59
RGPD6-202ENST00000330331 CHMP4BQ9H444 224 aaKnown RBP18.72■□□□□ 0.59
RGPD6-202ENST00000330331 TET3O43151 1660 aa18.71■□□□□ 0.59
RGPD6-202ENST00000330331 NAP1L2Q9ULW6 460 aaPredicted RBP18.71■□□□□ 0.59
RGPD6-202ENST00000330331 RNF17Q9BXT8 1623 aaKnown RBP18.71■□□□□ 0.59
RGPD6-202ENST00000330331 TMEM63CQ9P1W3 806 aa18.71■□□□□ 0.59
RGPD6-202ENST00000330331 KIF16BQ96L93 1317 aa18.71■□□□□ 0.58
RGPD6-202ENST00000330331 NUCB1Q02818 461 aa18.7■□□□□ 0.58
RGPD6-202ENST00000330331 LRSAM1Q6UWE0 723 aa18.7■□□□□ 0.58
RGPD6-202ENST00000330331 WDR63Q8IWG1 891 aa18.7■□□□□ 0.58
RGPD6-202ENST00000330331 TSR2Q969E8 191 aaKnown RBP18.7■□□□□ 0.58
RGPD6-202ENST00000330331 ZNF830Q96NB3 372 aaPredicted RBP18.7■□□□□ 0.58
RGPD6-202ENST00000330331 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
RGPD6-202ENST00000330331 YEATS2Q9ULM3 1422 aa18.7■□□□□ 0.58
RGPD6-202ENST00000330331 NPC1L1Q9UHC9 1359 aa18.7■□□□□ 0.58
RGPD6-202ENST00000330331 LETM1O95202 739 aaPredicted RBP18.7■□□□□ 0.58
RGPD6-202ENST00000330331 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
RGPD6-202ENST00000330331 TBC1D9Q6ZT07 1266 aa18.69■□□□□ 0.58
RGPD6-202ENST00000330331 DDX19BQ9UMR2 479 aa18.69■□□□□ 0.58
RGPD6-202ENST00000330331 SYNMO15061 1565 aa18.69■□□□□ 0.58
RGPD6-202ENST00000330331 CHD1LQ86WJ1 897 aa18.69■□□□□ 0.58
RGPD6-202ENST00000330331 ATP10AO60312 1499 aa18.69■□□□□ 0.58
RGPD6-202ENST00000330331 NUCB2P80303 420 aa18.68■□□□□ 0.58
RGPD6-202ENST00000330331 C17orf53Q8N3J3 647 aaPredicted RBP18.68■□□□□ 0.58
RGPD6-202ENST00000330331 TMEM51Q9NW97 253 aa18.68■□□□□ 0.58
RGPD6-202ENST00000330331 TMEM57Q8N5G2 664 aa18.68■□□□□ 0.58
RGPD6-202ENST00000330331 FOXD4L5Q5VV16 416 aaPredicted RBP18.67■□□□□ 0.58
RGPD6-202ENST00000330331 FOXD4L4Q8WXT5 416 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms