RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 RPGRIP1LQ68CZ1 1315 aa22.08■■□□□ 1.13
PTP4A3-201ENST00000329397 NOB1Q9ULX3 412 aaKnown RBP22.08■■□□□ 1.13
PTP4A3-201ENST00000329397 NEXMIFQ5QGS0 1516 aa22.07■■□□□ 1.12
PTP4A3-201ENST00000329397 PRAM1Q96QH2 718 aa22.07■■□□□ 1.12
PTP4A3-201ENST00000329397 FYB1O15117 783 aa22.06■■□□□ 1.12
PTP4A3-201ENST00000329397 RIPK4P57078 832 aa22.06■■□□□ 1.12
PTP4A3-201ENST00000329397 ANTXR1Q9H6X2 564 aa22.06■■□□□ 1.12
PTP4A3-201ENST00000329397 TMEM57Q8N5G2 664 aa22.05■■□□□ 1.12
PTP4A3-201ENST00000329397 ADGRB2O60241 1585 aa22.05■■□□□ 1.12
PTP4A3-201ENST00000329397 MLH3Q9UHC1 1453 aa22.04■■□□□ 1.12
PTP4A3-201ENST00000329397 ABCC11Q96J66 1382 aa22.04■■□□□ 1.12
PTP4A3-201ENST00000329397 MYO5BQ9ULV0 1848 aa22.03■■□□□ 1.12
PTP4A3-201ENST00000329397 ATF7IPQ6VMQ6 1270 aa22.03■■□□□ 1.12
PTP4A3-201ENST00000329397 NSD2O96028 1365 aa22.03■■□□□ 1.12
PTP4A3-201ENST00000329397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.03■■□□□ 1.12
PTP4A3-201ENST00000329397 THUMPD2Q9BTF0 503 aaKnown RBP22.01■■□□□ 1.11
PTP4A3-201ENST00000329397 AAMPQ13685 434 aa22.01■■□□□ 1.11
PTP4A3-201ENST00000329397 C22orf23Q9BZE7 217 aa22■■□□□ 1.11
PTP4A3-201ENST00000329397 FBXO31Q5XUX0 539 aaPredicted RBP21.99■■□□□ 1.11
PTP4A3-201ENST00000329397 COL3A1P02461 1466 aaPredicted RBP21.99■■□□□ 1.11
PTP4A3-201ENST00000329397 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
PTP4A3-201ENST00000329397 GZF1Q9H116 711 aaPredicted RBP21.99■■□□□ 1.11
PTP4A3-201ENST00000329397 CABP1Q9NZU7 370 aa21.99■■□□□ 1.11
PTP4A3-201ENST00000329397 OSCARQ8IYS5 282 aa21.99■■□□□ 1.11
PTP4A3-201ENST00000329397 DDX19BQ9UMR2 479 aa21.99■■□□□ 1.11
PTP4A3-201ENST00000329397 DIAPH1O60610 1272 aaKnown RBP21.98■■□□□ 1.11
PTP4A3-201ENST00000329397 HMOX1P09601 288 aa21.98■■□□□ 1.11
PTP4A3-201ENST00000329397 PIK3C2BO00750 1634 aa21.97■■□□□ 1.11
PTP4A3-201ENST00000329397 ELL2O00472 640 aaPredicted RBP21.97■■□□□ 1.11
PTP4A3-201ENST00000329397 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
PTP4A3-201ENST00000329397 C1orf115Q9H7X2 142 aa21.97■■□□□ 1.11
PTP4A3-201ENST00000329397 TERF2IPQ9NYB0 399 aa21.97■■□□□ 1.11
PTP4A3-201ENST00000329397 CD163L1Q9NR16 1453 aa21.96■■□□□ 1.11
PTP4A3-201ENST00000329397 CDK19Q9BWU1 502 aa21.95■■□□□ 1.1
PTP4A3-201ENST00000329397 YEATS2Q9ULM3 1422 aa21.95■■□□□ 1.1
PTP4A3-201ENST00000329397 PRKAR2BP31323 418 aa21.95■■□□□ 1.1
PTP4A3-201ENST00000329397 HDAC1Q13547 482 aaPredicted RBP21.94■■□□□ 1.1
PTP4A3-201ENST00000329397 PUS7Q96PZ0 661 aaKnown RBP21.94■■□□□ 1.1
PTP4A3-201ENST00000329397 PTPRMP28827 1452 aa21.94■■□□□ 1.1
PTP4A3-201ENST00000329397 ZBTB40Q9NUA8 1239 aa21.94■■□□□ 1.1
PTP4A3-201ENST00000329397 WAPLQ7Z5K2 1190 aa21.93■■□□□ 1.1
PTP4A3-201ENST00000329397 PHACTR3Q96KR7 559 aa21.93■■□□□ 1.1
PTP4A3-201ENST00000329397 DIP2CQ9Y2E4 1556 aa21.92■■□□□ 1.1
PTP4A3-201ENST00000329397 CT47B1P0C2W7 299 aaPredicted RBP21.92■■□□□ 1.1
PTP4A3-201ENST00000329397 SMC5Q8IY18 1101 aa21.92■■□□□ 1.1
PTP4A3-201ENST00000329397 YTHDC2Q9H6S0 1430 aaKnown RBP21.91■■□□□ 1.1
PTP4A3-201ENST00000329397 HDGFL2Q7Z4V5 671 aaPredicted RBP21.91■■□□□ 1.1
PTP4A3-201ENST00000329397 ATAD2Q6PL18 1390 aa21.9■■□□□ 1.1
PTP4A3-201ENST00000329397 TSPYL6Q8N831 410 aa21.9■■□□□ 1.1
PTP4A3-201ENST00000329397 CFAP74Q9C0B2 1584 aa21.9■■□□□ 1.1
PTP4A3-201ENST00000329397 STAG3Q9UJ98 1225 aa21.9■■□□□ 1.1
PTP4A3-201ENST00000329397 ZMYM3Q14202 1370 aa21.89■■□□□ 1.09
PTP4A3-201ENST00000329397 LRRC7Q96NW7 1537 aa21.88■■□□□ 1.09
PTP4A3-201ENST00000329397 ZRANB1Q9UGI0 708 aa21.88■■□□□ 1.09
PTP4A3-201ENST00000329397 SLC52A1Q9NWF4 448 aa21.88■■□□□ 1.09
PTP4A3-201ENST00000329397 EMILIN1Q9Y6C2 1016 aa21.88■■□□□ 1.09
PTP4A3-201ENST00000329397 KIF16BQ96L93 1317 aa21.88■■□□□ 1.09
PTP4A3-201ENST00000329397 MCM4P33991 863 aa21.87■■□□□ 1.09
PTP4A3-201ENST00000329397 NCBP3Q53F19 620 aaKnown RBP21.87■■□□□ 1.09
PTP4A3-201ENST00000329397 POLKQ9UBT6 870 aa21.87■■□□□ 1.09
PTP4A3-201ENST00000329397 RSPH6AQ9H0K4 717 aa21.87■■□□□ 1.09
PTP4A3-201ENST00000329397 IL16Q14005 1332 aa21.85■■□□□ 1.09
PTP4A3-201ENST00000329397 IPO8O15397 1037 aaKnown RBP21.85■■□□□ 1.09
PTP4A3-201ENST00000329397 ANKRD45Q5TZF3 282 aa21.85■■□□□ 1.09
PTP4A3-201ENST00000329397 FOXD4L1Q9NU39 408 aa21.85■■□□□ 1.09
PTP4A3-201ENST00000329397 NUCB1Q02818 461 aa21.85■■□□□ 1.09
PTP4A3-201ENST00000329397 PANK2Q9BZ23 570 aa21.84■■□□□ 1.09
PTP4A3-201ENST00000329397 NCKAP5LQ9HCH0 1330 aa21.84■■□□□ 1.09
PTP4A3-201ENST00000329397 CHD1LQ86WJ1 897 aa21.84■■□□□ 1.09
PTP4A3-201ENST00000329397 TMEM131LA2VDJ0 1609 aa21.84■■□□□ 1.09
PTP4A3-201ENST00000329397 HSCBQ8IWL3 235 aa21.83■■□□□ 1.09
PTP4A3-201ENST00000329397 ANKRD26Q9UPS8 1709 aa21.83■■□□□ 1.09
PTP4A3-201ENST00000329397 FCHSD2O94868 740 aa21.82■■□□□ 1.08
PTP4A3-201ENST00000329397 PNPLA6Q8IY17 1366 aa21.82■■□□□ 1.08
PTP4A3-201ENST00000329397 FAM83GA6ND36 823 aa21.82■■□□□ 1.08
PTP4A3-201ENST00000329397 PDE4CQ08493 712 aa21.82■■□□□ 1.08
PTP4A3-201ENST00000329397 CHMP5Q9NZZ3 219 aa21.82■■□□□ 1.08
PTP4A3-201ENST00000329397 NME9Q86XW9 330 aa21.82■■□□□ 1.08
PTP4A3-201ENST00000329397 PREX1Q8TCU6 1659 aa21.81■■□□□ 1.08
PTP4A3-201ENST00000329397 DCTN1Q14203 1278 aa21.81■■□□□ 1.08
PTP4A3-201ENST00000329397 ZFYVE9O95405 1425 aa21.8■■□□□ 1.08
PTP4A3-201ENST00000329397 ARHGAP31Q2M1Z3 1444 aa21.8■■□□□ 1.08
PTP4A3-201ENST00000329397 VAMP4O75379 141 aa21.8■■□□□ 1.08
PTP4A3-201ENST00000329397 PPIP5K1Q6PFW1 1433 aa21.8■■□□□ 1.08
PTP4A3-201ENST00000329397 MAP2P11137 1827 aaKnown RBP21.8■■□□□ 1.08
PTP4A3-201ENST00000329397 XRCC6P12956 609 aaKnown RBP eCLIP21.8■■□□□ 1.082e-6■□□□□ 10.8
PTP4A3-201ENST00000329397 RRS1Q15050 365 aaKnown RBP21.8■■□□□ 1.08
PTP4A3-201ENST00000329397 CYB5RLQ6IPT4 315 aa21.8■■□□□ 1.08
PTP4A3-201ENST00000329397 ZBTB7BO15156 539 aaPredicted RBP21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 CD2BP2O95400 341 aaKnown RBP21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 FAM135BQ49AJ0 1406 aa21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 KLHL34Q8N239 644 aa21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 ARHGEF40Q8TER5 1519 aa21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 RRAGDQ9NQL2 400 aaPredicted RBP21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 ALKQ9UM73 1620 aa21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 KIF20BQ96Q89 1820 aa21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 TRAK2O60296 914 aa21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 ALDH1L2Q3SY69 923 aa21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 MBIPQ9NS73 344 aa21.79■■□□□ 1.08
PTP4A3-201ENST00000329397 RBM42Q9BTD8 480 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms