RNA–Protein interactions for RNA: ENST00000329245.8

TOP1MT-201, Transcript of DNA topoisomerase I mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1MT, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-201ENST00000329245 COG3Q96JB2 828 aa28.95■■■□□ 2.22
TOP1MT-201ENST00000329245 INSRP06213 1382 aa28.94■■■□□ 2.22
TOP1MT-201ENST00000329245 ZRANB1Q9UGI0 708 aa28.93■■■□□ 2.22
TOP1MT-201ENST00000329245 STRCQ7RTU9 1775 aa28.93■■■□□ 2.22
TOP1MT-201ENST00000329245 C19orf44Q9H6X5 657 aa28.92■■■□□ 2.22
TOP1MT-201ENST00000329245 PHF8Q9UPP1 1060 aa28.91■■■□□ 2.22
TOP1MT-201ENST00000329245 ESCO1Q5FWF5 840 aa28.9■■■□□ 2.22
TOP1MT-201ENST00000329245 BLMP54132 1417 aaPredicted RBP28.89■■■□□ 2.22
TOP1MT-201ENST00000329245 TMEM94Q12767 1356 aa28.89■■■□□ 2.22
TOP1MT-201ENST00000329245 TTC21AQ8NDW8 1320 aa28.87■■■□□ 2.21
TOP1MT-201ENST00000329245 FBLN1P23142 703 aa28.86■■■□□ 2.21
TOP1MT-201ENST00000329245 SSH2Q76I76 1423 aa28.86■■■□□ 2.21
TOP1MT-201ENST00000329245 NRKQ7Z2Y5 1582 aa28.86■■■□□ 2.21
TOP1MT-201ENST00000329245 SALL2Q9Y467 1007 aaPredicted RBP28.86■■■□□ 2.21
TOP1MT-201ENST00000329245 STRCP1A6NGW2 1772 aa28.86■■■□□ 2.21
TOP1MT-201ENST00000329245 PPM1GO15355 546 aaPredicted RBP28.84■■■□□ 2.21
TOP1MT-201ENST00000329245 POLKQ9UBT6 870 aa28.84■■■□□ 2.21
TOP1MT-201ENST00000329245 ATF3P18847 181 aa28.83■■■□□ 2.21
TOP1MT-201ENST00000329245 NCOA3Q9Y6Q9 1424 aa28.83■■■□□ 2.21
TOP1MT-201ENST00000329245 CCDC146Q8IYE0 955 aa28.81■■■□□ 2.2
TOP1MT-201ENST00000329245 ORAI2Q96SN7 254 aa28.81■■■□□ 2.2
TOP1MT-201ENST00000329245 AATKQ6ZMQ8 1374 aa28.8■■■□□ 2.2
TOP1MT-201ENST00000329245 PAK3O75914 559 aaPredicted RBP28.8■■■□□ 2.2
TOP1MT-201ENST00000329245 PSME1Q06323 249 aa28.8■■■□□ 2.2
TOP1MT-201ENST00000329245 NUDCQ9Y266 331 aa28.8■■■□□ 2.2
TOP1MT-201ENST00000329245 ZNF335Q9H4Z2 1342 aaPredicted RBP28.79■■■□□ 2.2
TOP1MT-201ENST00000329245 DMRT2Q9Y5R5 561 aa28.79■■■□□ 2.2
TOP1MT-201ENST00000329245 EMILIN1Q9Y6C2 1016 aa28.77■■■□□ 2.2
TOP1MT-201ENST00000329245 SHPRHQ149N8 1683 aa28.77■■■□□ 2.2
TOP1MT-201ENST00000329245 OVOS2A0A0J9YW53 1432 aa28.77■■■□□ 2.2
TOP1MT-201ENST00000329245 OVOS2Q6IE36 1432 aa28.77■■■□□ 2.2
TOP1MT-201ENST00000329245 DIAPH1O60610 1272 aaKnown RBP28.76■■■□□ 2.19
TOP1MT-201ENST00000329245 U2AF1L5P0DN76 240 aaPredicted RBP28.76■■■□□ 2.19
TOP1MT-201ENST00000329245 U2AF1Q01081 240 aaKnown RBP eCLIP28.76■■■□□ 2.19
TOP1MT-201ENST00000329245 RRS1Q15050 365 aaKnown RBP28.76■■■□□ 2.19
TOP1MT-201ENST00000329245 PNPLA6Q8IY17 1366 aa28.76■■■□□ 2.19
TOP1MT-201ENST00000329245 C1orf167Q5SNV9 1468 aa28.75■■■□□ 2.19
TOP1MT-201ENST00000329245 U2SURPO15042 1029 aaKnown RBP28.75■■■□□ 2.19
TOP1MT-201ENST00000329245 NLRP6P59044 892 aa28.75■■■□□ 2.19
TOP1MT-201ENST00000329245 CADPS2Q86UW7 1296 aa28.75■■■□□ 2.19
TOP1MT-201ENST00000329245 ABTB2Q8N961 1025 aa28.75■■■□□ 2.19
TOP1MT-201ENST00000329245 MSH6P52701 1360 aa28.75■■■□□ 2.19
TOP1MT-201ENST00000329245 FOXO3O43524 673 aa28.74■■■□□ 2.19
TOP1MT-201ENST00000329245 DCCP43146 1447 aa28.74■■■□□ 2.19
TOP1MT-201ENST00000329245 MAP2P11137 1827 aaKnown RBP28.73■■■□□ 2.19
TOP1MT-201ENST00000329245 COL3A1P02461 1466 aaPredicted RBP28.72■■■□□ 2.19
TOP1MT-201ENST00000329245 USP31Q70CQ4 1352 aa28.72■■■□□ 2.19
TOP1MT-201ENST00000329245 SOX12O15370 315 aa28.72■■■□□ 2.19
TOP1MT-201ENST00000329245 APAF1O14727 1248 aa28.71■■■□□ 2.19
TOP1MT-201ENST00000329245 NUTM2GQ5VZR2 741 aa28.71■■■□□ 2.19
TOP1MT-201ENST00000329245 RUNDC1Q96C34 613 aa28.7■■■□□ 2.18
TOP1MT-201ENST00000329245 MST1RQ04912 1400 aa28.69■■■□□ 2.18
TOP1MT-201ENST00000329245 SMG6Q86US8 1419 aaKnown RBP28.69■■■□□ 2.18
TOP1MT-201ENST00000329245 PDE3BQ13370 1112 aa28.68■■■□□ 2.18
TOP1MT-201ENST00000329245 LRRC7Q96NW7 1537 aa28.68■■■□□ 2.18
TOP1MT-201ENST00000329245 PIK3C2AO00443 1686 aa28.68■■■□□ 2.18
TOP1MT-201ENST00000329245 XPCQ01831 940 aaPredicted RBP28.67■■■□□ 2.18
TOP1MT-201ENST00000329245 CDK12Q9NYV4 1490 aaPredicted RBP28.66■■■□□ 2.18
TOP1MT-201ENST00000329245 KRT28Q7Z3Y7 464 aa28.64■■■□□ 2.17
TOP1MT-201ENST00000329245 KIF1AQ12756 1690 aa28.61■■■□□ 2.17
TOP1MT-201ENST00000329245 IL13P35225 146 aa28.61■■■□□ 2.17
TOP1MT-201ENST00000329245 NGEFQ8N5V2 710 aa28.61■■■□□ 2.17
TOP1MT-201ENST00000329245 XIRP1Q702N8 1843 aaKnown RBP28.61■■■□□ 2.17
TOP1MT-201ENST00000329245 TCP11L2Q8N4U5 519 aa28.61■■■□□ 2.17
TOP1MT-201ENST00000329245 CDCA7LQ96GN5 454 aa28.6■■■□□ 2.17
TOP1MT-201ENST00000329245 PNNQ9H307 717 aaKnown RBP28.6■■■□□ 2.17
TOP1MT-201ENST00000329245 SUPT16HQ9Y5B9 1047 aaKnown RBP28.6■■■□□ 2.17
TOP1MT-201ENST00000329245 MAP3K19Q56UN5 1328 aa28.59■■■□□ 2.17
TOP1MT-201ENST00000329245 LMOD2Q6P5Q4 547 aa28.59■■■□□ 2.17
TOP1MT-201ENST00000329245 NEUROD2Q15784 382 aa28.59■■■□□ 2.17
TOP1MT-201ENST00000329245 AMPHP49418 695 aa28.57■■■□□ 2.16
TOP1MT-201ENST00000329245 FCHSD2O94868 740 aa28.57■■■□□ 2.16
TOP1MT-201ENST00000329245 NEFLP07196 543 aa28.57■■■□□ 2.16
TOP1MT-201ENST00000329245 HSP90AB2PQ58FF8 381 aa28.57■■■□□ 2.16
TOP1MT-201ENST00000329245 PLEKHF1Q96S99 279 aa28.57■■■□□ 2.16
TOP1MT-201ENST00000329245 RRP7AQ9Y3A4 280 aaKnown RBP28.57■■■□□ 2.16
TOP1MT-201ENST00000329245 ZNF521Q96K83 1311 aa28.56■■■□□ 2.16
TOP1MT-201ENST00000329245 MAPK8IP3Q9UPT6 1336 aa28.56■■■□□ 2.16
TOP1MT-201ENST00000329245 GOLGA2Q08379 1002 aa28.55■■■□□ 2.16
TOP1MT-201ENST00000329245 FKBP8Q14318 412 aa28.55■■■□□ 2.16
TOP1MT-201ENST00000329245 DDX17Q92841 729 aaKnown RBP28.55■■■□□ 2.16
TOP1MT-201ENST00000329245 SBNO1A3KN83 1393 aa28.54■■■□□ 2.16
TOP1MT-201ENST00000329245 HMOX1P09601 288 aa28.53■■■□□ 2.16
TOP1MT-201ENST00000329245 EIF4A2Q14240 407 aaKnown RBP28.53■■■□□ 2.16
TOP1MT-201ENST00000329245 SLAIN2Q9P270 581 aa28.53■■■□□ 2.16
TOP1MT-201ENST00000329245 NPHP3Q7Z494 1330 aa28.53■■■□□ 2.16
TOP1MT-201ENST00000329245 USP54Q70EL1 1684 aa28.53■■■□□ 2.16
TOP1MT-201ENST00000329245 FLT4P35916 1363 aa28.52■■■□□ 2.16
TOP1MT-201ENST00000329245 KCNH5Q8NCM2 988 aa28.52■■■□□ 2.16
TOP1MT-201ENST00000329245 IQSEC2Q5JU85 1478 aa28.52■■■□□ 2.16
TOP1MT-201ENST00000329245 MARF1Q9Y4F3 1742 aaKnown RBP28.52■■■□□ 2.16
TOP1MT-201ENST00000329245 NEFMP07197 916 aa28.51■■■□□ 2.16
TOP1MT-201ENST00000329245 PLEKHG5O94827 1062 aa28.51■■■□□ 2.15
TOP1MT-201ENST00000329245 WWC1Q8IX03 1113 aa28.51■■■□□ 2.15
TOP1MT-201ENST00000329245 RSPH6AQ9H0K4 717 aa28.51■■■□□ 2.15
TOP1MT-201ENST00000329245 PEAK1Q9H792 1746 aa28.51■■■□□ 2.15
TOP1MT-201ENST00000329245 PRKAR2BP31323 418 aa28.5■■■□□ 2.15
TOP1MT-201ENST00000329245 BRINP3Q76B58 766 aa28.5■■■□□ 2.15
TOP1MT-201ENST00000329245 TRPM3Q9HCF6 1732 aaPredicted RBP28.48■■■□□ 2.15
TOP1MT-201ENST00000329245 KIF24Q5T7B8 1368 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms