RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 SSH1Q8WYL5 1049 aa21.09■□□□□ 0.97
SSH1-201ENST00000326470 TMEM132EQ6IEE7 984 aa21.08■□□□□ 0.97
SSH1-201ENST00000326470 KIDINS220Q9ULH0 1771 aa21.08■□□□□ 0.97
SSH1-201ENST00000326470 NCOA3Q9Y6Q9 1424 aa21.08■□□□□ 0.97
SSH1-201ENST00000326470 CLCN1P35523 988 aa21.08■□□□□ 0.96
SSH1-201ENST00000326470 MLH3Q9UHC1 1453 aa21.07■□□□□ 0.96
SSH1-201ENST00000326470 PPLO60437 1756 aa21.07■□□□□ 0.96
SSH1-201ENST00000326470 PLEKHF1Q96S99 279 aa21.07■□□□□ 0.96
SSH1-201ENST00000326470 DDIT3P35638 169 aa21.06■□□□□ 0.96
SSH1-201ENST00000326470 EVC2Q86UK5 1308 aa21.06■□□□□ 0.96
SSH1-201ENST00000326470 TMPOP42166 694 aaKnown RBP21.06■□□□□ 0.96
SSH1-201ENST00000326470 RBM25P49756 843 aaKnown RBP21.06■□□□□ 0.96
SSH1-201ENST00000326470 ISY1Q9ULR0 285 aaKnown RBP21.06■□□□□ 0.96
SSH1-201ENST00000326470 SNX21Q969T3 373 aa21.05■□□□□ 0.96
SSH1-201ENST00000326470 TRIM35Q9UPQ4 493 aa21.05■□□□□ 0.96
SSH1-201ENST00000326470 IL16Q14005 1332 aa21.05■□□□□ 0.96
SSH1-201ENST00000326470 ZBTB40Q9NUA8 1239 aa21.05■□□□□ 0.96
SSH1-201ENST00000326470 NOB1Q9ULX3 412 aaKnown RBP21.05■□□□□ 0.96
SSH1-201ENST00000326470 RPGRIP1LQ68CZ1 1315 aa21.04■□□□□ 0.96
SSH1-201ENST00000326470 ABCC11Q96J66 1382 aa21.03■□□□□ 0.96
SSH1-201ENST00000326470 TMEM57Q8N5G2 664 aa21.03■□□□□ 0.96
SSH1-201ENST00000326470 PNNQ9H307 717 aaKnown RBP21.03■□□□□ 0.96
SSH1-201ENST00000326470 GLI2P10070 1586 aa21.03■□□□□ 0.96
SSH1-201ENST00000326470 HECW2Q9P2P5 1572 aa21.03■□□□□ 0.96
SSH1-201ENST00000326470 TULP4Q9NRJ4 1543 aa21.03■□□□□ 0.96
SSH1-201ENST00000326470 NUCB1Q02818 461 aa21.02■□□□□ 0.96
SSH1-201ENST00000326470 GRPEL1Q9HAV7 217 aa21.02■□□□□ 0.96
SSH1-201ENST00000326470 NPATQ14207 1427 aa21.01■□□□□ 0.95
SSH1-201ENST00000326470 U2SURPO15042 1029 aaKnown RBP21■□□□□ 0.95
SSH1-201ENST00000326470 CIZ1Q9ULV3 898 aaPredicted RBP21■□□□□ 0.95
SSH1-201ENST00000326470 KIF16BQ96L93 1317 aa21■□□□□ 0.95
SSH1-201ENST00000326470 IPO8O15397 1037 aaKnown RBP21■□□□□ 0.95
SSH1-201ENST00000326470 COL3A1P02461 1466 aaPredicted RBP20.99■□□□□ 0.95
SSH1-201ENST00000326470 TNPO1Q92973 898 aaKnown RBP20.97■□□□□ 0.95
SSH1-201ENST00000326470 CABP2Q9NPB3 220 aa20.97■□□□□ 0.95
SSH1-201ENST00000326470 CHD1LQ86WJ1 897 aa20.97■□□□□ 0.95
SSH1-201ENST00000326470 NAP1L5Q96NT1 182 aaPredicted RBP20.97■□□□□ 0.95
SSH1-201ENST00000326470 LNPKQ9C0E8 428 aa20.96■□□□□ 0.95
SSH1-201ENST00000326470 ARHGEF28Q8N1W1 1705 aaKnown RBP20.96■□□□□ 0.95
SSH1-201ENST00000326470 ALDH1L2Q3SY69 923 aa20.96■□□□□ 0.95
SSH1-201ENST00000326470 RIPK4P57078 832 aa20.95■□□□□ 0.94
SSH1-201ENST00000326470 BMP2KLQ5H9B9 411 aa20.95■□□□□ 0.94
SSH1-201ENST00000326470 GBP4Q96PP9 640 aa20.95■□□□□ 0.94
SSH1-201ENST00000326470 A0A1W2PP64 1363 aa20.95■□□□□ 0.94
SSH1-201ENST00000326470 RAB3GAP1Q15042 981 aa20.95■□□□□ 0.94
SSH1-201ENST00000326470 HSP90AB1P08238 724 aaKnown RBP20.94■□□□□ 0.94
SSH1-201ENST00000326470 FAM69CQ0P6D2 419 aa20.94■□□□□ 0.94
SSH1-201ENST00000326470 SKOR2Q2VWA4 1001 aaPredicted RBP20.93■□□□□ 0.94
SSH1-201ENST00000326470 PTMSP20962 102 aa20.93■□□□□ 0.94
SSH1-201ENST00000326470 KIF2CQ99661 725 aa20.93■□□□□ 0.94
SSH1-201ENST00000326470 GGNBP2Q9H3C7 697 aa20.93■□□□□ 0.94
SSH1-201ENST00000326470 ESPNB1AK53 854 aa20.92■□□□□ 0.94
SSH1-201ENST00000326470 VGFO15240 615 aaPredicted RBP20.92■□□□□ 0.94
SSH1-201ENST00000326470 FRMPD1Q5SYB0 1578 aa20.91■□□□□ 0.94
SSH1-201ENST00000326470 RAPGEF3O95398 923 aa20.91■□□□□ 0.94
SSH1-201ENST00000326470 BRPF1P55201 1214 aaPredicted RBP20.91■□□□□ 0.94
SSH1-201ENST00000326470 CFAP65Q6ZU64 1925 aaKnown RBP20.9■□□□□ 0.94
SSH1-201ENST00000326470 MED14O60244 1454 aa20.9■□□□□ 0.94
SSH1-201ENST00000326470 GAS2L3Q86XJ1 694 aa20.89■□□□□ 0.94
SSH1-201ENST00000326470 ZNF428Q96B54 188 aa20.89■□□□□ 0.94
SSH1-201ENST00000326470 FYB1O15117 783 aa20.89■□□□□ 0.93
SSH1-201ENST00000326470 GCC1Q96CN9 775 aa20.89■□□□□ 0.93
SSH1-201ENST00000326470 DIAPH1O60610 1272 aaKnown RBP20.88■□□□□ 0.93
SSH1-201ENST00000326470 GGT6Q6P531 493 aa20.88■□□□□ 0.93
SSH1-201ENST00000326470 RICTORQ6R327 1708 aa20.88■□□□□ 0.93
SSH1-201ENST00000326470 PNPLA6Q8IY17 1366 aa20.88■□□□□ 0.93
SSH1-201ENST00000326470 ERBB4Q15303 1308 aa20.87■□□□□ 0.93
SSH1-201ENST00000326470 CHMP4BQ9H444 224 aaKnown RBP20.87■□□□□ 0.93
SSH1-201ENST00000326470 DIP2BQ9P265 1576 aa20.87■□□□□ 0.93
SSH1-201ENST00000326470 CAMSAP1Q5T5Y3 1602 aa20.87■□□□□ 0.93
SSH1-201ENST00000326470 PPIP5K1Q6PFW1 1433 aa20.87■□□□□ 0.93
SSH1-201ENST00000326470 ZBTB7BO15156 539 aaPredicted RBP20.87■□□□□ 0.93
SSH1-201ENST00000326470 ANKRD45Q5TZF3 282 aa20.87■□□□□ 0.93
SSH1-201ENST00000326470 NUTM2DQ5VT03 806 aaPredicted RBP20.87■□□□□ 0.93
SSH1-201ENST00000326470 NEXMIFQ5QGS0 1516 aa20.87■□□□□ 0.93
SSH1-201ENST00000326470 K7ELQ4 463 aaPredicted RBP20.86■□□□□ 0.93
SSH1-201ENST00000326470 SRPK2P78362 688 aaKnown RBP20.86■□□□□ 0.93
SSH1-201ENST00000326470 SAFB2Q14151 953 aaKnown RBP eCLIP20.86■□□□□ 0.93
SSH1-201ENST00000326470 TRIM44Q96DX7 344 aaPredicted RBP20.86■□□□□ 0.93
SSH1-201ENST00000326470 CD2BP2O95400 341 aaKnown RBP20.86■□□□□ 0.93
SSH1-201ENST00000326470 HSP90AA1P07900 732 aaKnown RBP20.86■□□□□ 0.93
SSH1-201ENST00000326470 TERF2IPQ9NYB0 399 aa20.86■□□□□ 0.93
SSH1-201ENST00000326470 DIP2CQ9Y2E4 1556 aa20.86■□□□□ 0.93
SSH1-201ENST00000326470 ABCC3O15438 1527 aa20.85■□□□□ 0.93
SSH1-201ENST00000326470 ANKRD26Q9UPS8 1709 aa20.85■□□□□ 0.93
SSH1-201ENST00000326470 ATAD2Q6PL18 1390 aa20.85■□□□□ 0.93
SSH1-201ENST00000326470 TBC1D9Q6ZT07 1266 aa20.85■□□□□ 0.93
SSH1-201ENST00000326470 PIK3R4Q99570 1358 aa20.84■□□□□ 0.93
SSH1-201ENST00000326470 FCHSD2O94868 740 aa20.84■□□□□ 0.93
SSH1-201ENST00000326470 ARHGAP45Q92619 1136 aa20.84■□□□□ 0.93
SSH1-201ENST00000326470 PIK3C2BO00750 1634 aa20.84■□□□□ 0.93
SSH1-201ENST00000326470 CLEC17AQ6ZS10 378 aa20.83■□□□□ 0.92
SSH1-201ENST00000326470 RRP9O43818 475 aaKnown RBP20.82■□□□□ 0.92
SSH1-201ENST00000326470 CD163L1Q9NR16 1453 aa20.82■□□□□ 0.92
SSH1-201ENST00000326470 PTCH1Q13635 1447 aa20.81■□□□□ 0.92
SSH1-201ENST00000326470 GLIPR1L2Q4G1C9 344 aa20.81■□□□□ 0.92
SSH1-201ENST00000326470 MRPL50Q8N5N7 158 aaKnown RBP20.81■□□□□ 0.92
SSH1-201ENST00000326470 FOXD4L1Q9NU39 408 aa20.81■□□□□ 0.92
SSH1-201ENST00000326470 ZFYVE9O95405 1425 aa20.8■□□□□ 0.92
SSH1-201ENST00000326470 CDC42BPGQ6DT37 1551 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms