RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 LRRC59Q96AG4 307 aaKnown RBP16.67■□□□□ 0.26
LIN28A-202ENST00000326279 LMOD3Q0VAK6 560 aa16.67■□□□□ 0.26
LIN28A-202ENST00000326279 SKAP1Q86WV1 359 aa16.67■□□□□ 0.26
LIN28A-202ENST00000326279 MS4A1P11836 297 aa16.66■□□□□ 0.26
LIN28A-202ENST00000326279 ABCC3O15438 1527 aa16.66■□□□□ 0.26
LIN28A-202ENST00000326279 MAGI2Q86UL8 1455 aa16.65■□□□□ 0.26
LIN28A-202ENST00000326279 POLKQ9UBT6 870 aa16.65■□□□□ 0.26
LIN28A-202ENST00000326279 CHMP3Q9Y3E7 222 aa16.65■□□□□ 0.26
LIN28A-202ENST00000326279 ZNF335Q9H4Z2 1342 aaPredicted RBP16.64■□□□□ 0.25
LIN28A-202ENST00000326279 C20orf194Q5TEA3 1177 aa16.64■□□□□ 0.25
LIN28A-202ENST00000326279 ERVK-7P63135 1459 aa16.63■□□□□ 0.25
LIN28A-202ENST00000326279 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
LIN28A-202ENST00000326279 LRPPRCP42704 1394 aaKnown RBP16.63■□□□□ 0.25
LIN28A-202ENST00000326279 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
LIN28A-202ENST00000326279 TTC5Q8N0Z6 440 aa16.63■□□□□ 0.25
LIN28A-202ENST00000326279 SPRYD3Q8NCJ5 442 aa16.62■□□□□ 0.25
LIN28A-202ENST00000326279 MSH6P52701 1360 aa16.62■□□□□ 0.25
LIN28A-202ENST00000326279 ROBO2Q9HCK4 1378 aa16.62■□□□□ 0.25
LIN28A-202ENST00000326279 WWC1Q8IX03 1113 aa16.61■□□□□ 0.25
LIN28A-202ENST00000326279 ZKSCAN2Q63HK3 967 aa16.61■□□□□ 0.25
LIN28A-202ENST00000326279 CFAP74Q9C0B2 1584 aa16.61■□□□□ 0.25
LIN28A-202ENST00000326279 PTPRTO14522 1441 aa16.61■□□□□ 0.25
LIN28A-202ENST00000326279 FKBP5Q13451 457 aaPredicted RBP16.61■□□□□ 0.25
LIN28A-202ENST00000326279 RWDD1Q9H446 243 aaPredicted RBP16.61■□□□□ 0.25
LIN28A-202ENST00000326279 NOP58Q9Y2X3 529 aaKnown RBP16.61■□□□□ 0.25
LIN28A-202ENST00000326279 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
LIN28A-202ENST00000326279 PTCD1O75127 700 aaKnown RBP16.6■□□□□ 0.25
LIN28A-202ENST00000326279 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
LIN28A-202ENST00000326279 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
LIN28A-202ENST00000326279 NGLY1Q96IV0 654 aa16.59■□□□□ 0.25
LIN28A-202ENST00000326279 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
LIN28A-202ENST00000326279 ANKRD36BQ8N2N9 1353 aa16.59■□□□□ 0.25
LIN28A-202ENST00000326279 DIP2BQ9P265 1576 aa16.58■□□□□ 0.25
LIN28A-202ENST00000326279 TATP17735 454 aaPredicted RBP16.58■□□□□ 0.25
LIN28A-202ENST00000326279 ANP32EQ9BTT0 268 aa16.58■□□□□ 0.24
LIN28A-202ENST00000326279 MSH5O43196 834 aa16.58■□□□□ 0.24
LIN28A-202ENST00000326279 GCP02774 474 aa16.58■□□□□ 0.24
LIN28A-202ENST00000326279 PDE4AP27815 886 aa16.58■□□□□ 0.24
LIN28A-202ENST00000326279 PHACTR3Q96KR7 559 aa16.58■□□□□ 0.24
LIN28A-202ENST00000326279 ARAP3Q8WWN8 1544 aa16.58■□□□□ 0.24
LIN28A-202ENST00000326279 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
LIN28A-202ENST00000326279 SLC4A3P48751 1232 aa16.57■□□□□ 0.24
LIN28A-202ENST00000326279 GNAI1P63096 354 aa16.57■□□□□ 0.24
LIN28A-202ENST00000326279 PLEKHO1Q53GL0 409 aaPredicted RBP16.57■□□□□ 0.24
LIN28A-202ENST00000326279 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
LIN28A-202ENST00000326279 MAP3K19Q56UN5 1328 aa16.56■□□□□ 0.24
LIN28A-202ENST00000326279 FCHSD2O94868 740 aa16.56■□□□□ 0.24
LIN28A-202ENST00000326279 KCNH5Q8NCM2 988 aa16.56■□□□□ 0.24
LIN28A-202ENST00000326279 C1orf115Q9H7X2 142 aa16.56■□□□□ 0.24
LIN28A-202ENST00000326279 PRR36Q9H6K5 1346 aa16.56■□□□□ 0.24
LIN28A-202ENST00000326279 SLFN5Q08AF3 891 aa16.55■□□□□ 0.24
LIN28A-202ENST00000326279 EIF4A2Q14240 407 aaKnown RBP16.55■□□□□ 0.24
LIN28A-202ENST00000326279 ANKRD24Q8TF21 1146 aa16.55■□□□□ 0.24
LIN28A-202ENST00000326279 SLAIN2Q9P270 581 aa16.55■□□□□ 0.24
LIN28A-202ENST00000326279 TAOK2Q9UL54 1235 aa16.55■□□□□ 0.24
LIN28A-202ENST00000326279 EFCAB6Q5THR3 1501 aa16.55■□□□□ 0.24
LIN28A-202ENST00000326279 TMEM94Q12767 1356 aa16.55■□□□□ 0.24
LIN28A-202ENST00000326279 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
LIN28A-202ENST00000326279 TWISTNBQ3B726 338 aaPredicted RBP16.55■□□□□ 0.24
LIN28A-202ENST00000326279 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
LIN28A-202ENST00000326279 DIP2CQ9Y2E4 1556 aa16.54■□□□□ 0.24
LIN28A-202ENST00000326279 ABCC11Q96J66 1382 aa16.54■□□□□ 0.24
LIN28A-202ENST00000326279 TRPM2O94759 1503 aa16.54■□□□□ 0.24
LIN28A-202ENST00000326279 CENPQQ7L2Z9 268 aaPredicted RBP16.54■□□□□ 0.24
LIN28A-202ENST00000326279 DDRGK1Q96HY6 314 aa16.54■□□□□ 0.24
LIN28A-202ENST00000326279 PARD3Q8TEW0 1356 aa16.53■□□□□ 0.24
LIN28A-202ENST00000326279 PLXNC1O60486 1568 aa16.53■□□□□ 0.24
LIN28A-202ENST00000326279 MYL6BP14649 208 aa16.53■□□□□ 0.24
LIN28A-202ENST00000326279 NFE2L2Q16236 605 aa16.53■□□□□ 0.24
LIN28A-202ENST00000326279 KIDINS220Q9ULH0 1771 aa16.53■□□□□ 0.24
LIN28A-202ENST00000326279 C8orf37Q96NL8 207 aa16.53■□□□□ 0.24
LIN28A-202ENST00000326279 NPHP3Q7Z494 1330 aa16.53■□□□□ 0.24
LIN28A-202ENST00000326279 ANXA1P04083 346 aa16.53■□□□□ 0.24
LIN28A-202ENST00000326279 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
LIN28A-202ENST00000326279 KRT24Q2M2I5 525 aa16.52■□□□□ 0.24
LIN28A-202ENST00000326279 ABCA6Q8N139 1617 aa16.52■□□□□ 0.23
LIN28A-202ENST00000326279 A2ML1A8K2U0 1454 aa16.52■□□□□ 0.23
LIN28A-202ENST00000326279 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.23
LIN28A-202ENST00000326279 CLTCL1P53675 1640 aa16.52■□□□□ 0.23
LIN28A-202ENST00000326279 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
LIN28A-202ENST00000326279 GTF2E1P29083 439 aaPredicted RBP16.51■□□□□ 0.23
LIN28A-202ENST00000326279 CHMP4BQ9H444 224 aaKnown RBP16.51■□□□□ 0.23
LIN28A-202ENST00000326279 TOM1O60784 492 aa16.51■□□□□ 0.23
LIN28A-202ENST00000326279 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
LIN28A-202ENST00000326279 BECN1Q14457 450 aa16.51■□□□□ 0.23
LIN28A-202ENST00000326279 EYA1Q99502 592 aa16.5■□□□□ 0.23
LIN28A-202ENST00000326279 CABP4P57796 275 aa16.5■□□□□ 0.23
LIN28A-202ENST00000326279 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
LIN28A-202ENST00000326279 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
LIN28A-202ENST00000326279 NOB1Q9ULX3 412 aaKnown RBP16.5■□□□□ 0.23
LIN28A-202ENST00000326279 PIP4K2AP48426 406 aaPredicted RBP16.5■□□□□ 0.23
LIN28A-202ENST00000326279 PIK3C2GO75747 1445 aa16.5■□□□□ 0.23
LIN28A-202ENST00000326279 HDGFL1Q5TGJ6 251 aa16.49■□□□□ 0.23
LIN28A-202ENST00000326279 CEP152O94986 1710 aa16.49■□□□□ 0.23
LIN28A-202ENST00000326279 SLKQ9H2G2 1235 aaPredicted RBP16.48■□□□□ 0.23
LIN28A-202ENST00000326279 SLC39A6Q13433 755 aa16.48■□□□□ 0.23
LIN28A-202ENST00000326279 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
LIN28A-202ENST00000326279 TPRNQ4KMQ1 711 aa16.48■□□□□ 0.23
LIN28A-202ENST00000326279 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
LIN28A-202ENST00000326279 C9orf78Q9NZ63 289 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms