RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 USP32Q8NFA0 1604 aa18.32■□□□□ 0.52
CUL1-201ENST00000325222 DDX11L8A8MPP1 907 aa18.32■□□□□ 0.52
CUL1-201ENST00000325222 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
CUL1-201ENST00000325222 DDX19BQ9UMR2 479 aa18.32■□□□□ 0.52
CUL1-201ENST00000325222 TMPOP42166 694 aaKnown RBP18.31■□□□□ 0.52
CUL1-201ENST00000325222 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
CUL1-201ENST00000325222 LNPKQ9C0E8 428 aa18.31■□□□□ 0.52
CUL1-201ENST00000325222 SETBP1Q9Y6X0 1596 aa18.31■□□□□ 0.52
CUL1-201ENST00000325222 SNX21Q969T3 373 aa18.31■□□□□ 0.52
CUL1-201ENST00000325222 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
CUL1-201ENST00000325222 PPRC1Q5VV67 1664 aaKnown RBP18.3■□□□□ 0.52
CUL1-201ENST00000325222 ESPNB1AK53 854 aa18.3■□□□□ 0.52
CUL1-201ENST00000325222 NUCB1Q02818 461 aa18.3■□□□□ 0.52
CUL1-201ENST00000325222 CT47B1P0C2W7 299 aaPredicted RBP18.29■□□□□ 0.52
CUL1-201ENST00000325222 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
CUL1-201ENST00000325222 ADGRB3O60242 1522 aa18.29■□□□□ 0.52
CUL1-201ENST00000325222 ADGRL1O94910 1474 aa18.28■□□□□ 0.52
CUL1-201ENST00000325222 RAB3GAP1Q15042 981 aa18.28■□□□□ 0.52
CUL1-201ENST00000325222 U2SURPO15042 1029 aaKnown RBP18.27■□□□□ 0.52
CUL1-201ENST00000325222 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
CUL1-201ENST00000325222 CABP2Q9NPB3 220 aa18.26■□□□□ 0.51
CUL1-201ENST00000325222 TULP4Q9NRJ4 1543 aa18.26■□□□□ 0.51
CUL1-201ENST00000325222 ANKRD36BQ8N2N9 1353 aa18.26■□□□□ 0.51
CUL1-201ENST00000325222 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
CUL1-201ENST00000325222 ARAP3Q8WWN8 1544 aa18.25■□□□□ 0.51
CUL1-201ENST00000325222 NUTM2DQ5VT03 806 aaPredicted RBP18.25■□□□□ 0.51
CUL1-201ENST00000325222 FANCAO15360 1455 aa18.24■□□□□ 0.51
CUL1-201ENST00000325222 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
CUL1-201ENST00000325222 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
CUL1-201ENST00000325222 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
CUL1-201ENST00000325222 UHRF1BP1LA0JNW5 1464 aa18.24■□□□□ 0.51
CUL1-201ENST00000325222 PPLO60437 1756 aa18.23■□□□□ 0.51
CUL1-201ENST00000325222 CFAP65Q6ZU64 1925 aaKnown RBP18.23■□□□□ 0.51
CUL1-201ENST00000325222 ISY1Q9ULR0 285 aaKnown RBP18.22■□□□□ 0.51
CUL1-201ENST00000325222 CIZ1Q9ULV3 898 aaPredicted RBP18.22■□□□□ 0.51
CUL1-201ENST00000325222 SAFB2Q14151 953 aaKnown RBP eCLIP18.22■□□□□ 0.51
CUL1-201ENST00000325222 SSFA2P28290 1259 aa18.21■□□□□ 0.51
CUL1-201ENST00000325222 RIPK4P57078 832 aa18.21■□□□□ 0.51
CUL1-201ENST00000325222 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
CUL1-201ENST00000325222 GAS2L2Q8NHY3 880 aa18.21■□□□□ 0.51
CUL1-201ENST00000325222 NSD2O96028 1365 aa18.21■□□□□ 0.51
CUL1-201ENST00000325222 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.51
CUL1-201ENST00000325222 BMP2KLQ5H9B9 411 aa18.21■□□□□ 0.51
CUL1-201ENST00000325222 ABCA9Q8IUA7 1624 aa18.21■□□□□ 0.5
CUL1-201ENST00000325222 PPIP5K1Q6PFW1 1433 aa18.2■□□□□ 0.5
CUL1-201ENST00000325222 ABCC11Q96J66 1382 aa18.2■□□□□ 0.5
CUL1-201ENST00000325222 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
CUL1-201ENST00000325222 A0A1W2PP64 1363 aa18.2■□□□□ 0.5
CUL1-201ENST00000325222 TBC1D9Q6ZT07 1266 aa18.19■□□□□ 0.5
CUL1-201ENST00000325222 GBP4Q96PP9 640 aa18.19■□□□□ 0.5
CUL1-201ENST00000325222 IL16Q14005 1332 aa18.19■□□□□ 0.5
CUL1-201ENST00000325222 NPATQ14207 1427 aa18.19■□□□□ 0.5
CUL1-201ENST00000325222 ANKRD45Q5TZF3 282 aa18.19■□□□□ 0.5
CUL1-201ENST00000325222 CFAP74Q9C0B2 1584 aa18.19■□□□□ 0.5
CUL1-201ENST00000325222 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
CUL1-201ENST00000325222 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
CUL1-201ENST00000325222 LMTK2Q8IWU2 1503 aa18.18■□□□□ 0.5
CUL1-201ENST00000325222 ZBTB7BO15156 539 aaPredicted RBP18.18■□□□□ 0.5
CUL1-201ENST00000325222 GLI2P10070 1586 aa18.18■□□□□ 0.5
CUL1-201ENST00000325222 KIF16BQ96L93 1317 aa18.17■□□□□ 0.5
CUL1-201ENST00000325222 K7ELQ4 463 aaPredicted RBP18.17■□□□□ 0.5
CUL1-201ENST00000325222 TRIM44Q96DX7 344 aaPredicted RBP18.17■□□□□ 0.5
CUL1-201ENST00000325222 KIDINS220Q9ULH0 1771 aa18.16■□□□□ 0.5
CUL1-201ENST00000325222 IPO8O15397 1037 aaKnown RBP18.16■□□□□ 0.5
CUL1-201ENST00000325222 ARHGEF28Q8N1W1 1705 aaKnown RBP18.16■□□□□ 0.5
CUL1-201ENST00000325222 FYB1O15117 783 aa18.16■□□□□ 0.5
CUL1-201ENST00000325222 PUS7Q96PZ0 661 aaKnown RBP18.16■□□□□ 0.5
CUL1-201ENST00000325222 SKOR2Q2VWA4 1001 aaPredicted RBP18.15■□□□□ 0.5
CUL1-201ENST00000325222 MED14O60244 1454 aa18.15■□□□□ 0.5
CUL1-201ENST00000325222 ALDH1L2Q3SY69 923 aa18.14■□□□□ 0.5
CUL1-201ENST00000325222 PPP1R9BQ96SB3 815 aa18.14■□□□□ 0.49
CUL1-201ENST00000325222 FBLN1P23142 703 aa18.13■□□□□ 0.49
CUL1-201ENST00000325222 TSPYL6Q8N831 410 aa18.13■□□□□ 0.49
CUL1-201ENST00000325222 THUMPD2Q9BTF0 503 aaKnown RBP18.13■□□□□ 0.49
CUL1-201ENST00000325222 CAMSAP1Q5T5Y3 1602 aa18.12■□□□□ 0.49
CUL1-201ENST00000325222 BAG4O95429 457 aaKnown RBP18.12■□□□□ 0.49
CUL1-201ENST00000325222 AK9Q5TCS8 1911 aa18.12■□□□□ 0.49
CUL1-201ENST00000325222 GGT6Q6P531 493 aa18.12■□□□□ 0.49
CUL1-201ENST00000325222 CLEC17AQ6ZS10 378 aa18.12■□□□□ 0.49
CUL1-201ENST00000325222 MRPL50Q8N5N7 158 aaKnown RBP18.12■□□□□ 0.49
CUL1-201ENST00000325222 GSPT1P15170 499 aaKnown RBP18.11■□□□□ 0.49
CUL1-201ENST00000325222 NASPP49321 788 aaPredicted RBP18.11■□□□□ 0.49
CUL1-201ENST00000325222 CD163L1Q9NR16 1453 aa18.1■□□□□ 0.49
CUL1-201ENST00000325222 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
CUL1-201ENST00000325222 VAMP4O75379 141 aa18.1■□□□□ 0.49
CUL1-201ENST00000325222 GCC1Q96CN9 775 aa18.1■□□□□ 0.49
CUL1-201ENST00000325222 STK26Q9P289 416 aa18.1■□□□□ 0.49
CUL1-201ENST00000325222 BRPF1P55201 1214 aaPredicted RBP18.09■□□□□ 0.49
CUL1-201ENST00000325222 SRPK2P78362 688 aaKnown RBP18.09■□□□□ 0.49
CUL1-201ENST00000325222 CCDC173Q0VFZ6 552 aa18.09■□□□□ 0.49
CUL1-201ENST00000325222 PKP1Q13835 747 aa18.09■□□□□ 0.49
CUL1-201ENST00000325222 RPGRIP1LQ68CZ1 1315 aa18.09■□□□□ 0.49
CUL1-201ENST00000325222 KLHL40Q2TBA0 621 aa18.09■□□□□ 0.49
CUL1-201ENST00000325222 DDX49Q9Y6V7 483 aaKnown RBP18.09■□□□□ 0.49
CUL1-201ENST00000325222 PNPLA6Q8IY17 1366 aa18.09■□□□□ 0.49
CUL1-201ENST00000325222 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
CUL1-201ENST00000325222 ELL2O00472 640 aaPredicted RBP18.08■□□□□ 0.49
CUL1-201ENST00000325222 KIAA1211Q6ZU35 1233 aa18.08■□□□□ 0.49
CUL1-201ENST00000325222 ATAD2Q6PL18 1390 aa18.08■□□□□ 0.49
CUL1-201ENST00000325222 PIK3R4Q99570 1358 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms