RNA–Protein interactions for RNA: ENST00000324954.10

SMARCA2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 1,781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-202ENST00000324954 PAXIP1Q6ZW49 1069 aaPredicted RBP12.05□□□□□ -0.48
SMARCA2-202ENST00000324954 TMC1Q8TDI8 760 aa12.05□□□□□ -0.48
SMARCA2-202ENST00000324954 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
SMARCA2-202ENST00000324954 CD163L1Q9NR16 1453 aa12.05□□□□□ -0.48
SMARCA2-202ENST00000324954 PLEKHG3A1L390 1219 aa12.05□□□□□ -0.48
SMARCA2-202ENST00000324954 CDCA8Q53HL2 280 aa12.05□□□□□ -0.48
SMARCA2-202ENST00000324954 ACEP12821 1306 aa12.04□□□□□ -0.48
SMARCA2-202ENST00000324954 XPCQ01831 940 aaPredicted RBP12.04□□□□□ -0.48
SMARCA2-202ENST00000324954 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
SMARCA2-202ENST00000324954 ERICH6Q7L0X2 663 aa12.03□□□□□ -0.48
SMARCA2-202ENST00000324954 POLR3AO14802 1390 aaPredicted RBP12.03□□□□□ -0.48
SMARCA2-202ENST00000324954 KIF1AQ12756 1690 aa12.03□□□□□ -0.48
SMARCA2-202ENST00000324954 ZNF316A6NFI3 1004 aaPredicted RBP12.02□□□□□ -0.48
SMARCA2-202ENST00000324954 GTF3C3Q9Y5Q9 886 aa12.02□□□□□ -0.48
SMARCA2-202ENST00000324954 AKAP12Q02952 1782 aa12.02□□□□□ -0.48
SMARCA2-202ENST00000324954 NHSL1Q5SYE7 1610 aa12.02□□□□□ -0.48
SMARCA2-202ENST00000324954 CPSF1Q10570 1443 aaKnown RBP12.02□□□□□ -0.49
SMARCA2-202ENST00000324954 NGDNQ8NEJ9 315 aaKnown RBP12.02□□□□□ -0.49
SMARCA2-202ENST00000324954 A0A1W2PP64 1363 aa12.02□□□□□ -0.49
SMARCA2-202ENST00000324954 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
SMARCA2-202ENST00000324954 PROM2Q8N271 834 aa12□□□□□ -0.49
SMARCA2-202ENST00000324954 NINLQ9Y2I6 1382 aa12□□□□□ -0.49
SMARCA2-202ENST00000324954 PXDNQ92626 1479 aa12□□□□□ -0.49
SMARCA2-202ENST00000324954 MON2Q7Z3U7 1717 aa12□□□□□ -0.49
SMARCA2-202ENST00000324954 ANKRD36BQ8N2N9 1353 aa12□□□□□ -0.49
SMARCA2-202ENST00000324954 SAMD1Q6SPF0 538 aaPredicted RBP12□□□□□ -0.49
SMARCA2-202ENST00000324954 CARD14Q9BXL6 1004 aa12□□□□□ -0.49
SMARCA2-202ENST00000324954 AHDC1Q5TGY3 1603 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-202ENST00000324954 PSME1Q06323 249 aa11.99□□□□□ -0.49
SMARCA2-202ENST00000324954 PANK3Q9H999 370 aa11.99□□□□□ -0.49
SMARCA2-202ENST00000324954 TRPM3Q9HCF6 1732 aaPredicted RBP11.99□□□□□ -0.49
SMARCA2-202ENST00000324954 USP6P35125 1406 aa11.99□□□□□ -0.49
SMARCA2-202ENST00000324954 NPHP3Q7Z494 1330 aa11.99□□□□□ -0.49
SMARCA2-202ENST00000324954 NRKQ7Z2Y5 1582 aa11.98□□□□□ -0.49
SMARCA2-202ENST00000324954 PHLPP1O60346 1717 aa11.98□□□□□ -0.49
SMARCA2-202ENST00000324954 KTN1Q86UP2 1357 aaKnown RBP11.98□□□□□ -0.49
SMARCA2-202ENST00000324954 KRT28Q7Z3Y7 464 aa11.98□□□□□ -0.49
SMARCA2-202ENST00000324954 SSH2Q76I76 1423 aa11.98□□□□□ -0.49
SMARCA2-202ENST00000324954 SOS2Q07890 1332 aaPredicted RBP11.98□□□□□ -0.49
SMARCA2-202ENST00000324954 COL16A1Q07092 1604 aaPredicted RBP11.98□□□□□ -0.49
SMARCA2-202ENST00000324954 TERF2IPQ9NYB0 399 aa11.97□□□□□ -0.49
SMARCA2-202ENST00000324954 HSPA1LP34931 641 aa11.97□□□□□ -0.49
SMARCA2-202ENST00000324954 DDX10Q13206 875 aaKnown RBP11.97□□□□□ -0.49
SMARCA2-202ENST00000324954 HDGFL2Q7Z4V5 671 aaPredicted RBP11.96□□□□□ -0.49
SMARCA2-202ENST00000324954 FBXO41Q8TF61 875 aa11.96□□□□□ -0.49
SMARCA2-202ENST00000324954 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
SMARCA2-202ENST00000324954 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-202ENST00000324954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMARCA2-202ENST00000324954 NSD3Q9BZ95 1437 aa11.95□□□□□ -0.5
SMARCA2-202ENST00000324954 PIK3C2AO00443 1686 aa11.95□□□□□ -0.5
SMARCA2-202ENST00000324954 ALS2Q96Q42 1657 aa11.95□□□□□ -0.5
SMARCA2-202ENST00000324954 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
SMARCA2-202ENST00000324954 TTC21BQ7Z4L5 1316 aa11.94□□□□□ -0.5
SMARCA2-202ENST00000324954 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
SMARCA2-202ENST00000324954 SPATA31A3Q5VYP0 1347 aa11.94□□□□□ -0.5
SMARCA2-202ENST00000324954 NUTM2GQ5VZR2 741 aa11.93□□□□□ -0.5
SMARCA2-202ENST00000324954 NME9Q86XW9 330 aa11.93□□□□□ -0.5
SMARCA2-202ENST00000324954 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
SMARCA2-202ENST00000324954 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
SMARCA2-202ENST00000324954 TNS3Q68CZ2 1445 aa11.93□□□□□ -0.5
SMARCA2-202ENST00000324954 MARF1Q9Y4F3 1742 aaKnown RBP11.92□□□□□ -0.5
SMARCA2-202ENST00000324954 LMOD2Q6P5Q4 547 aa11.92□□□□□ -0.5
SMARCA2-202ENST00000324954 FYB1O15117 783 aa11.92□□□□□ -0.5
SMARCA2-202ENST00000324954 ABTB2Q8N961 1025 aa11.92□□□□□ -0.5
SMARCA2-202ENST00000324954 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
SMARCA2-202ENST00000324954 LRRC59Q96AG4 307 aaKnown RBP11.91□□□□□ -0.5
SMARCA2-202ENST00000324954 KIF20BQ96Q89 1820 aa11.91□□□□□ -0.5
SMARCA2-202ENST00000324954 GGNBP2Q9H3C7 697 aa11.9□□□□□ -0.5
SMARCA2-202ENST00000324954 BRD4O60885 1362 aaPredicted RBP11.9□□□□□ -0.51
SMARCA2-202ENST00000324954 PNPLA6Q8IY17 1366 aa11.9□□□□□ -0.51
SMARCA2-202ENST00000324954 TTC21AQ8NDW8 1320 aa11.9□□□□□ -0.51
SMARCA2-202ENST00000324954 CNGB1Q14028 1251 aaPredicted RBP11.9□□□□□ -0.51
SMARCA2-202ENST00000324954 CABLES1Q8TDN4 633 aa11.9□□□□□ -0.51
SMARCA2-202ENST00000324954 KNSTRNQ9Y448 316 aa11.9□□□□□ -0.51
SMARCA2-202ENST00000324954 MED1Q15648 1581 aaPredicted RBP11.89□□□□□ -0.51
SMARCA2-202ENST00000324954 NLRP6P59044 892 aa11.89□□□□□ -0.51
SMARCA2-202ENST00000324954 NBR1Q14596 966 aa11.89□□□□□ -0.51
SMARCA2-202ENST00000324954 TSHZ2Q9NRE2 1034 aa11.89□□□□□ -0.51
SMARCA2-202ENST00000324954 CRYBG1Q9Y4K1 1723 aa11.89□□□□□ -0.51
SMARCA2-202ENST00000324954 CGNL1Q0VF96 1302 aa11.88□□□□□ -0.51
SMARCA2-202ENST00000324954 SHPRHQ149N8 1683 aa11.88□□□□□ -0.51
SMARCA2-202ENST00000324954 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
SMARCA2-202ENST00000324954 OVOS2A0A0J9YW53 1432 aa11.88□□□□□ -0.51
SMARCA2-202ENST00000324954 OVOS2Q6IE36 1432 aa11.88□□□□□ -0.51
SMARCA2-202ENST00000324954 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
SMARCA2-202ENST00000324954 COL22A1Q8NFW1 1626 aaPredicted RBP11.88□□□□□ -0.51
SMARCA2-202ENST00000324954 HOMEZQ8IX15 550 aa11.87□□□□□ -0.51
SMARCA2-202ENST00000324954 ABCA3Q99758 1704 aa11.87□□□□□ -0.51
SMARCA2-202ENST00000324954 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
SMARCA2-202ENST00000324954 USP31Q70CQ4 1352 aa11.87□□□□□ -0.51
SMARCA2-202ENST00000324954 FBLN1P23142 703 aa11.87□□□□□ -0.51
SMARCA2-202ENST00000324954 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-202ENST00000324954 CC2D1BQ5T0F9 858 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-202ENST00000324954 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-202ENST00000324954 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
SMARCA2-202ENST00000324954 JCADQ9P266 1359 aa11.86□□□□□ -0.51
SMARCA2-202ENST00000324954 USP19O94966 1318 aa11.86□□□□□ -0.51
SMARCA2-202ENST00000324954 ANKRD26Q9UPS8 1709 aa11.86□□□□□ -0.51
SMARCA2-202ENST00000324954 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
SMARCA2-202ENST00000324954 SOX12O15370 315 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms