RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 SAFB2Q14151 953 aaKnown RBP eCLIP22.89■■□□□ 1.269e-7■■■□□ 15.2
TRAPPC12-201ENST00000324266 MLECQ14165 292 aa22.89■■□□□ 1.26
TRAPPC12-201ENST00000324266 TSR2Q969E8 191 aaKnown RBP22.89■■□□□ 1.26
TRAPPC12-201ENST00000324266 CCDC27Q2M243 656 aa22.89■■□□□ 1.25
TRAPPC12-201ENST00000324266 MYH16Q9H6N6 1097 aa22.88■■□□□ 1.25
TRAPPC12-201ENST00000324266 LMTK2Q8IWU2 1503 aa22.88■■□□□ 1.25
TRAPPC12-201ENST00000324266 PPLO60437 1756 aa22.88■■□□□ 1.25
TRAPPC12-201ENST00000324266 RWDD1Q9H446 243 aaPredicted RBP22.88■■□□□ 1.25
TRAPPC12-201ENST00000324266 CABP2Q9NPB3 220 aa22.88■■□□□ 1.25
TRAPPC12-201ENST00000324266 ABCC3O15438 1527 aa22.88■■□□□ 1.25
TRAPPC12-201ENST00000324266 MVPQ14764 893 aaKnown RBP22.86■■□□□ 1.25
TRAPPC12-201ENST00000324266 TBC1D32Q96NH3 1257 aa22.86■■□□□ 1.25
TRAPPC12-201ENST00000324266 UPF2Q9HAU5 1272 aaKnown RBP22.86■■□□□ 1.25
TRAPPC12-201ENST00000324266 REREQ9P2R6 1566 aa22.85■■□□□ 1.25
TRAPPC12-201ENST00000324266 XRCC6P12956 609 aaKnown RBP eCLIP22.85■■□□□ 1.253e-7■□□□□ 10.3
TRAPPC12-201ENST00000324266 FTSJ3Q8IY81 847 aaKnown RBP22.85■■□□□ 1.25
TRAPPC12-201ENST00000324266 ZKSCAN2Q63HK3 967 aa22.84■■□□□ 1.25
TRAPPC12-201ENST00000324266 EVC2Q86UK5 1308 aa22.84■■□□□ 1.25
TRAPPC12-201ENST00000324266 TBC1D2Q9BYX2 928 aa22.84■■□□□ 1.25
TRAPPC12-201ENST00000324266 SPRYD3Q8NCJ5 442 aa22.83■■□□□ 1.25
TRAPPC12-201ENST00000324266 ANTXR1Q9H6X2 564 aa22.83■■□□□ 1.25
TRAPPC12-201ENST00000324266 U2SURPO15042 1029 aaKnown RBP22.83■■□□□ 1.25
TRAPPC12-201ENST00000324266 DZIP1LQ8IYY4 767 aaKnown RBP22.83■■□□□ 1.25
TRAPPC12-201ENST00000324266 AGLP35573 1532 aa22.83■■□□□ 1.24
TRAPPC12-201ENST00000324266 ANKRD36BQ8N2N9 1353 aa22.82■■□□□ 1.24
TRAPPC12-201ENST00000324266 USP32Q8NFA0 1604 aa22.82■■□□□ 1.24
TRAPPC12-201ENST00000324266 TULP4Q9NRJ4 1543 aa22.81■■□□□ 1.24
TRAPPC12-201ENST00000324266 EXOSC9Q06265 439 aaKnown RBP22.81■■□□□ 1.24
TRAPPC12-201ENST00000324266 SMC4Q9NTJ3 1288 aa22.81■■□□□ 1.24
TRAPPC12-201ENST00000324266 GGNBP2Q9H3C7 697 aa22.8■■□□□ 1.24
TRAPPC12-201ENST00000324266 RPGRIP1LQ68CZ1 1315 aa22.79■■□□□ 1.24
TRAPPC12-201ENST00000324266 CAMSAP1Q5T5Y3 1602 aa22.79■■□□□ 1.24
TRAPPC12-201ENST00000324266 STK26Q9P289 416 aa22.78■■□□□ 1.24
TRAPPC12-201ENST00000324266 GOLGA6L3A6NEY3 463 aa22.78■■□□□ 1.24
TRAPPC12-201ENST00000324266 TRIM27P14373 513 aa22.78■■□□□ 1.24
TRAPPC12-201ENST00000324266 SSH1Q8WYL5 1049 aa22.77■■□□□ 1.24
TRAPPC12-201ENST00000324266 ITPRIPQ8IWB1 547 aa22.77■■□□□ 1.24
TRAPPC12-201ENST00000324266 PANK2Q9BZ23 570 aa22.77■■□□□ 1.24
TRAPPC12-201ENST00000324266 TMPOP42166 694 aaKnown RBP22.76■■□□□ 1.23
TRAPPC12-201ENST00000324266 PLEKHF1Q96S99 279 aa22.76■■□□□ 1.23
TRAPPC12-201ENST00000324266 TRIM35Q9UPQ4 493 aa22.76■■□□□ 1.23
TRAPPC12-201ENST00000324266 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
TRAPPC12-201ENST00000324266 FSD2A1L4K1 749 aa22.76■■□□□ 1.23
TRAPPC12-201ENST00000324266 MFAP1P55081 439 aaKnown RBP22.76■■□□□ 1.23
TRAPPC12-201ENST00000324266 ARXQ96QS3 562 aa22.76■■□□□ 1.23
TRAPPC12-201ENST00000324266 NSD2O96028 1365 aa22.76■■□□□ 1.23
TRAPPC12-201ENST00000324266 ADGRB2O60241 1585 aa22.75■■□□□ 1.23
TRAPPC12-201ENST00000324266 A0A1W2PP64 1363 aa22.75■■□□□ 1.23
TRAPPC12-201ENST00000324266 SRPK2P78362 688 aaKnown RBP22.75■■□□□ 1.23
TRAPPC12-201ENST00000324266 ARHGEF28Q8N1W1 1705 aaKnown RBP22.74■■□□□ 1.23
TRAPPC12-201ENST00000324266 ESPNB1AK53 854 aa22.74■■□□□ 1.23
TRAPPC12-201ENST00000324266 BBXQ8WY36 941 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC12-201ENST00000324266 VGFO15240 615 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC12-201ENST00000324266 NOB1Q9ULX3 412 aaKnown RBP22.73■■□□□ 1.23
TRAPPC12-201ENST00000324266 FBXO31Q5XUX0 539 aaPredicted RBP22.73■■□□□ 1.23
TRAPPC12-201ENST00000324266 PUS7Q96PZ0 661 aaKnown RBP22.73■■□□□ 1.23
TRAPPC12-201ENST00000324266 NCBP3Q53F19 620 aaKnown RBP22.72■■□□□ 1.23
TRAPPC12-201ENST00000324266 C22orf23Q9BZE7 217 aa22.72■■□□□ 1.23
TRAPPC12-201ENST00000324266 ATF7IPQ6VMQ6 1270 aa22.71■■□□□ 1.23
TRAPPC12-201ENST00000324266 PPP6R1Q9UPN7 881 aa22.71■■□□□ 1.23
TRAPPC12-201ENST00000324266 ARHGAP31Q2M1Z3 1444 aa22.71■■□□□ 1.23
TRAPPC12-201ENST00000324266 CT47B1P0C2W7 299 aaPredicted RBP22.7■■□□□ 1.22
TRAPPC12-201ENST00000324266 TMEM57Q8N5G2 664 aa22.7■■□□□ 1.22
TRAPPC12-201ENST00000324266 TAF7LQ5H9L4 462 aa22.7■■□□□ 1.22
TRAPPC12-201ENST00000324266 DDX19BQ9UMR2 479 aa22.7■■□□□ 1.22
TRAPPC12-201ENST00000324266 CLTCQ00610 1675 aaKnown RBP22.7■■□□□ 1.22
TRAPPC12-201ENST00000324266 ERBB4Q15303 1308 aa22.7■■□□□ 1.22
TRAPPC12-201ENST00000324266 ABCC11Q96J66 1382 aa22.7■■□□□ 1.22
TRAPPC12-201ENST00000324266 RIPK4P57078 832 aa22.69■■□□□ 1.22
TRAPPC12-201ENST00000324266 SMAP1Q8IYB5 467 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC12-201ENST00000324266 ESF1Q9H501 851 aaKnown RBP22.69■■□□□ 1.22
TRAPPC12-201ENST00000324266 NEXMIFQ5QGS0 1516 aa22.69■■□□□ 1.22
TRAPPC12-201ENST00000324266 GTF2E1P29083 439 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC12-201ENST00000324266 HDAC1Q13547 482 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC12-201ENST00000324266 MINK1Q8N4C8 1332 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC12-201ENST00000324266 NAP1L2Q9ULW6 460 aaPredicted RBP22.68■■□□□ 1.22
TRAPPC12-201ENST00000324266 FYB1O15117 783 aa22.68■■□□□ 1.22
TRAPPC12-201ENST00000324266 IDI1Q13907 227 aa22.68■■□□□ 1.22
TRAPPC12-201ENST00000324266 COL3A1P02461 1466 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC12-201ENST00000324266 SMC5Q8IY18 1101 aa22.64■■□□□ 1.22
TRAPPC12-201ENST00000324266 MAP7D2Q96T17 732 aa22.64■■□□□ 1.22
TRAPPC12-201ENST00000324266 GZF1Q9H116 711 aaPredicted RBP22.64■■□□□ 1.22
TRAPPC12-201ENST00000324266 KIAA1211Q6ZU35 1233 aa22.64■■□□□ 1.21
TRAPPC12-201ENST00000324266 MCM4P33991 863 aa22.63■■□□□ 1.21
TRAPPC12-201ENST00000324266 ZBTB40Q9NUA8 1239 aa22.63■■□□□ 1.21
TRAPPC12-201ENST00000324266 PRAM1Q96QH2 718 aa22.63■■□□□ 1.21
TRAPPC12-201ENST00000324266 FBLN1P23142 703 aa22.62■■□□□ 1.21
TRAPPC12-201ENST00000324266 DIAPH1O60610 1272 aaKnown RBP22.62■■□□□ 1.21
TRAPPC12-201ENST00000324266 PREX1Q8TCU6 1659 aa22.62■■□□□ 1.21
TRAPPC12-201ENST00000324266 LNPKQ9C0E8 428 aa22.61■■□□□ 1.21
TRAPPC12-201ENST00000324266 PIK3C2BO00750 1634 aa22.61■■□□□ 1.21
TRAPPC12-201ENST00000324266 MRE11P49959 708 aa22.61■■□□□ 1.21
TRAPPC12-201ENST00000324266 TERF2IPQ9NYB0 399 aa22.61■■□□□ 1.21
TRAPPC12-201ENST00000324266 ZHX1Q9UKY1 873 aaPredicted RBP22.61■■□□□ 1.21
TRAPPC12-201ENST00000324266 IL16Q14005 1332 aa22.6■■□□□ 1.21
TRAPPC12-201ENST00000324266 CHMP5Q9NZZ3 219 aa22.6■■□□□ 1.21
TRAPPC12-201ENST00000324266 CD163L1Q9NR16 1453 aa22.58■■□□□ 1.21
TRAPPC12-201ENST00000324266 SLC52A1Q9NWF4 448 aa22.58■■□□□ 1.21
TRAPPC12-201ENST00000324266 CHMP4BQ9H444 224 aaKnown RBP22.58■■□□□ 1.2
TRAPPC12-201ENST00000324266 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms