RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 GNAI2P04899 355 aa13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 WASHC4Q2M389 1173 aa13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 ZNF771Q7L3S4 317 aaPredicted RBP13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 HIP1O00291 1037 aa13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 SAFBQ15424 915 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 MCM2P49736 904 aa13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 CCDC184Q52MB2 194 aa13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 RALYLQ86SE5 291 aaKnown RBP13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 TSPY26PQ9H489 355 aa13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 FAM13BQ9NYF5 915 aa13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
SNRNP200-201ENST00000323853 ATF3P18847 181 aa13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 NAT10Q9H0A0 1025 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 KIF14Q15058 1648 aa13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 GPRASP1Q5JY77 1395 aa13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 SURF6O75683 361 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 ERC1Q8IUD2 1116 aa13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 SETQ01105 290 aaPredicted RBP13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 CAVIN1Q6NZI2 390 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 NLRP2Q9NX02 1062 aa13.13□□□□□ -0.31
SNRNP200-201ENST00000323853 RAD21O60216 631 aa13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 CCDC27Q2M243 656 aa13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 ABCA10Q8WWZ4 1543 aa13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 IPO7O95373 1038 aaKnown RBP13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 CLASRPQ8N2M8 674 aaKnown RBP13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 ABTB2Q8N961 1025 aa13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 CCDC141Q6ZP82 1450 aa13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 MAP3K1Q13233 1512 aa13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
SNRNP200-201ENST00000323853 RPGRIP1LQ68CZ1 1315 aa13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 DHX16O60231 1041 aaKnown RBP13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 MBD3O95983 291 aa13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 DNAJC2Q99543 621 aaKnown RBP13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 NEK4P51957 841 aa13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 PRPF40AO75400 957 aaKnown RBP13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 VSIG10Q8N0Z9 540 aa13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 TEX35Q5T0J7 233 aa13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
SNRNP200-201ENST00000323853 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
SNRNP200-201ENST00000323853 CCDC173Q0VFZ6 552 aa13.1□□□□□ -0.31
SNRNP200-201ENST00000323853 CWC22Q9HCG8 908 aaKnown RBP13.1□□□□□ -0.31
SNRNP200-201ENST00000323853 BRMS1Q9HCU9 246 aa13.1□□□□□ -0.31
SNRNP200-201ENST00000323853 ATF7IPQ6VMQ6 1270 aa13.1□□□□□ -0.31
SNRNP200-201ENST00000323853 TXNDC2Q86VQ3 553 aa13.1□□□□□ -0.31
SNRNP200-201ENST00000323853 TCEAL9Q9UHQ7 104 aa13.1□□□□□ -0.31
SNRNP200-201ENST00000323853 NSD3Q9BZ95 1437 aa13.1□□□□□ -0.31
SNRNP200-201ENST00000323853 CHD1LQ86WJ1 897 aa13.09□□□□□ -0.31
SNRNP200-201ENST00000323853 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
SNRNP200-201ENST00000323853 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
SNRNP200-201ENST00000323853 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
SNRNP200-201ENST00000323853 R3HCC1Q9Y3T6 440 aaKnown RBP13.09□□□□□ -0.31
SNRNP200-201ENST00000323853 KIAA0586Q9BVV6 1533 aa13.09□□□□□ -0.31
SNRNP200-201ENST00000323853 MSH5O43196 834 aa13.09□□□□□ -0.31
SNRNP200-201ENST00000323853 SLFN5Q08AF3 891 aa13.08□□□□□ -0.31
SNRNP200-201ENST00000323853 RNF214Q8ND24 703 aa13.08□□□□□ -0.31
SNRNP200-201ENST00000323853 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
SNRNP200-201ENST00000323853 ANKRD30BQ9BXX2 1392 aa13.08□□□□□ -0.32
SNRNP200-201ENST00000323853 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
SNRNP200-201ENST00000323853 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
SNRNP200-201ENST00000323853 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.32
SNRNP200-201ENST00000323853 KIF6Q6ZMV9 814 aa13.08□□□□□ -0.32
SNRNP200-201ENST00000323853 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
SNRNP200-201ENST00000323853 ATAD2Q6PL18 1390 aa13.08□□□□□ -0.32
SNRNP200-201ENST00000323853 FYB1O15117 783 aa13.08□□□□□ -0.32
SNRNP200-201ENST00000323853 ARGLU1Q9NWB6 273 aaPredicted RBP13.07□□□□□ -0.32
SNRNP200-201ENST00000323853 MAGI1Q96QZ7 1491 aaPredicted RBP13.07□□□□□ -0.32
SNRNP200-201ENST00000323853 XBP1P17861 261 aa13.07□□□□□ -0.32
SNRNP200-201ENST00000323853 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
SNRNP200-201ENST00000323853 TTC39AQ5SRH9 613 aa13.07□□□□□ -0.32
SNRNP200-201ENST00000323853 ABCC5O15440 1437 aa13.06□□□□□ -0.32
SNRNP200-201ENST00000323853 RBM33Q96EV2 1170 aaKnown RBP13.06□□□□□ -0.32
SNRNP200-201ENST00000323853 TBC1D2BQ9UPU7 963 aa13.06□□□□□ -0.32
SNRNP200-201ENST00000323853 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
SNRNP200-201ENST00000323853 AEBP1Q8IUX7 1158 aa13.06□□□□□ -0.32
SNRNP200-201ENST00000323853 KDM4AO75164 1064 aa13.06□□□□□ -0.32
SNRNP200-201ENST00000323853 BRPF3Q9ULD4 1205 aa13.06□□□□□ -0.32
SNRNP200-201ENST00000323853 PDILTQ8N807 584 aa13.05□□□□□ -0.32
SNRNP200-201ENST00000323853 WWC1Q8IX03 1113 aa13.05□□□□□ -0.32
SNRNP200-201ENST00000323853 MAP4K4O95819 1239 aaPredicted RBP13.05□□□□□ -0.32
SNRNP200-201ENST00000323853 PDCP20941 246 aa13.05□□□□□ -0.32
SNRNP200-201ENST00000323853 CYP46A1Q9Y6A2 500 aa13.05□□□□□ -0.32
SNRNP200-201ENST00000323853 HDGFL1Q5TGJ6 251 aa13.05□□□□□ -0.32
SNRNP200-201ENST00000323853 SLC52A1Q9NWF4 448 aa13.05□□□□□ -0.32
SNRNP200-201ENST00000323853 BIVM-ERCC5R4GMW8 1640 aa13.05□□□□□ -0.32
SNRNP200-201ENST00000323853 SDF4Q9BRK5 362 aa13.05□□□□□ -0.32
SNRNP200-201ENST00000323853 SART3Q15020 963 aaKnown RBP13.04□□□□□ -0.32
SNRNP200-201ENST00000323853 TRIM5Q9C035 493 aa13.04□□□□□ -0.32
SNRNP200-201ENST00000323853 SRCIN1Q9C0H9 1055 aa13.04□□□□□ -0.32
SNRNP200-201ENST00000323853 MEX3CQ5U5Q3 659 aaKnown RBP13.04□□□□□ -0.32
SNRNP200-201ENST00000323853 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 FCHSD2O94868 740 aa13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 NKTRP30414 1462 aaKnown RBP13.03□□□□□ -0.32
SNRNP200-201ENST00000323853 KINO60870 393 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms