RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 PLEKHH1Q9ULM0 1364 aa22.54■■□□□ 1.2
LTBP3-202ENST00000322147 MBD5Q9P267 1494 aa22.54■■□□□ 1.2
LTBP3-202ENST00000322147 VPS37CA5D8V6 355 aaPredicted RBP22.54■■□□□ 1.2
LTBP3-202ENST00000322147 TESK2Q96S53 571 aa22.54■■□□□ 1.2
LTBP3-202ENST00000322147 TRAK2O60296 914 aa22.54■■□□□ 1.2
LTBP3-202ENST00000322147 SLC52A1Q9NWF4 448 aa22.54■■□□□ 1.2
LTBP3-202ENST00000322147 WDR63Q8IWG1 891 aa22.54■■□□□ 1.2
LTBP3-202ENST00000322147 IFIT2P09913 472 aaKnown RBP22.53■■□□□ 1.2
LTBP3-202ENST00000322147 PANK2Q9BZ23 570 aa22.53■■□□□ 1.2
LTBP3-202ENST00000322147 XRCC6P12956 609 aaKnown RBP eCLIP22.53■■□□□ 1.2
LTBP3-202ENST00000322147 UHRF1BP1Q6BDS2 1440 aa22.53■■□□□ 1.2
LTBP3-202ENST00000322147 SMARCA5O60264 1052 aaPredicted RBP22.53■■□□□ 1.2
LTBP3-202ENST00000322147 UBTFL1P0CB47 393 aaPredicted RBP22.53■■□□□ 1.2
LTBP3-202ENST00000322147 EXOC6BQ9Y2D4 811 aa22.53■■□□□ 1.2
LTBP3-202ENST00000322147 FBXW7Q969H0 707 aa22.52■■□□□ 1.2
LTBP3-202ENST00000322147 F6X3S4 739 aa22.52■■□□□ 1.19
LTBP3-202ENST00000322147 NUP153P49790 1475 aaKnown RBP22.51■■□□□ 1.19
LTBP3-202ENST00000322147 KIAA2012Q0VF49 1180 aa22.51■■□□□ 1.19
LTBP3-202ENST00000322147 NUDT16Q96DE0 195 aaKnown RBP22.51■■□□□ 1.19
LTBP3-202ENST00000322147 DNMT1P26358 1616 aaKnown RBP22.51■■□□□ 1.19
LTBP3-202ENST00000322147 INTS3Q68E01 1043 aaKnown RBP22.51■■□□□ 1.19
LTBP3-202ENST00000322147 KDM4AO75164 1064 aa22.5■■□□□ 1.19
LTBP3-202ENST00000322147 USHBP1Q8N6Y0 703 aa22.5■■□□□ 1.19
LTBP3-202ENST00000322147 CDC45O75419 566 aa22.5■■□□□ 1.19
LTBP3-202ENST00000322147 ATP10BO94823 1461 aa22.49■■□□□ 1.19
LTBP3-202ENST00000322147 MCM4P33991 863 aa22.49■■□□□ 1.19
LTBP3-202ENST00000322147 CCDC27Q2M243 656 aa22.49■■□□□ 1.19
LTBP3-202ENST00000322147 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
LTBP3-202ENST00000322147 TRIM27P14373 513 aa22.49■■□□□ 1.19
LTBP3-202ENST00000322147 TBC1D2Q9BYX2 928 aa22.49■■□□□ 1.19
LTBP3-202ENST00000322147 BLMP54132 1417 aaPredicted RBP22.49■■□□□ 1.19
LTBP3-202ENST00000322147 PCDHB15Q9Y5E8 787 aa22.48■■□□□ 1.19
LTBP3-202ENST00000322147 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
LTBP3-202ENST00000322147 NEXNQ0ZGT2 675 aa22.48■■□□□ 1.19
LTBP3-202ENST00000322147 HDGFL1Q5TGJ6 251 aa22.48■■□□□ 1.19
LTBP3-202ENST00000322147 CHD1LQ86WJ1 897 aa22.48■■□□□ 1.19
LTBP3-202ENST00000322147 NEUROD6Q96NK8 337 aa22.48■■□□□ 1.19
LTBP3-202ENST00000322147 SIL1Q9H173 461 aa22.48■■□□□ 1.19
LTBP3-202ENST00000322147 CCDC61Q9Y6R9 512 aa22.48■■□□□ 1.19
LTBP3-202ENST00000322147 ZMYND15Q9H091 742 aa22.47■■□□□ 1.19
LTBP3-202ENST00000322147 CAVIN1Q6NZI2 390 aaKnown RBP22.47■■□□□ 1.19
LTBP3-202ENST00000322147 CREBRFQ8IUR6 639 aa22.47■■□□□ 1.19
LTBP3-202ENST00000322147 SYAP1Q96A49 352 aaPredicted RBP22.47■■□□□ 1.19
LTBP3-202ENST00000322147 CARD14Q9BXL6 1004 aa22.47■■□□□ 1.19
LTBP3-202ENST00000322147 ZRANB1Q9UGI0 708 aa22.47■■□□□ 1.19
LTBP3-202ENST00000322147 DDX54Q8TDD1 881 aaKnown RBP22.47■■□□□ 1.19
LTBP3-202ENST00000322147 RIC3Q7Z5B4 369 aa22.46■■□□□ 1.19
LTBP3-202ENST00000322147 RTEL1-TNFRSF6BF6WH68 1400 aa22.46■■□□□ 1.19
LTBP3-202ENST00000322147 NOS1P29475 1434 aa22.46■■□□□ 1.19
LTBP3-202ENST00000322147 MRE11P49959 708 aa22.46■■□□□ 1.19
LTBP3-202ENST00000322147 FAM177BA6PVY3 158 aa22.45■■□□□ 1.18
LTBP3-202ENST00000322147 EVA1CP58658 441 aa22.45■■□□□ 1.18
LTBP3-202ENST00000322147 RAPGEF4Q8WZA2 1011 aa22.45■■□□□ 1.18
LTBP3-202ENST00000322147 DMRT2Q9Y5R5 561 aa22.45■■□□□ 1.18
LTBP3-202ENST00000322147 G3BP1Q13283 466 aaKnown RBP eCLIP22.45■■□□□ 1.18
LTBP3-202ENST00000322147 PRPF40AO75400 957 aaKnown RBP22.44■■□□□ 1.18
LTBP3-202ENST00000322147 ZMYM4Q5VZL5 1548 aa22.44■■□□□ 1.18
LTBP3-202ENST00000322147 GTF2E1P29083 439 aaPredicted RBP22.44■■□□□ 1.18
LTBP3-202ENST00000322147 CHAF1AQ13111 956 aaPredicted RBP22.44■■□□□ 1.18
LTBP3-202ENST00000322147 RLBP1P12271 317 aa22.43■■□□□ 1.18
LTBP3-202ENST00000322147 TSHZ3Q63HK5 1081 aa22.43■■□□□ 1.18
LTBP3-202ENST00000322147 H3BQV1 296 aa22.43■■□□□ 1.18
LTBP3-202ENST00000322147 IFFO2Q5TF58 517 aa22.43■■□□□ 1.18
LTBP3-202ENST00000322147 ZC3H6P61129 1189 aaKnown RBP22.43■■□□□ 1.18
LTBP3-202ENST00000322147 RRP9O43818 475 aaKnown RBP22.42■■□□□ 1.18
LTBP3-202ENST00000322147 SF3A1Q15459 793 aaKnown RBP22.42■■□□□ 1.18
LTBP3-202ENST00000322147 NCKAP5LQ9HCH0 1330 aa22.42■■□□□ 1.18
LTBP3-202ENST00000322147 FCHSD2O94868 740 aa22.42■■□□□ 1.18
LTBP3-202ENST00000322147 CLCN1P35523 988 aa22.42■■□□□ 1.18
LTBP3-202ENST00000322147 NFE2L2Q16236 605 aa22.42■■□□□ 1.18
LTBP3-202ENST00000322147 WDR62O43379 1518 aa22.42■■□□□ 1.18
LTBP3-202ENST00000322147 FAM184AQ8NB25 1140 aa22.41■■□□□ 1.18
LTBP3-202ENST00000322147 UPF3BQ9BZI7 483 aaKnown RBP22.41■■□□□ 1.18
LTBP3-202ENST00000322147 ZKSCAN1P17029 563 aaPredicted RBP22.41■■□□□ 1.18
LTBP3-202ENST00000322147 GPRASP1Q5JY77 1395 aa22.41■■□□□ 1.18
LTBP3-202ENST00000322147 LARP6Q9BRS8 491 aaKnown RBP22.4■■□□□ 1.18
LTBP3-202ENST00000322147 CHMP4AQ9BY43 222 aa22.4■■□□□ 1.18
LTBP3-202ENST00000322147 APPP05067 770 aa22.4■■□□□ 1.18
LTBP3-202ENST00000322147 MYL6BP14649 208 aa22.4■■□□□ 1.18
LTBP3-202ENST00000322147 USP19O94966 1318 aa22.39■■□□□ 1.18
LTBP3-202ENST00000322147 ESPNB1AK53 854 aa22.39■■□□□ 1.18
LTBP3-202ENST00000322147 CD109Q6YHK3 1445 aa22.39■■□□□ 1.17
LTBP3-202ENST00000322147 HDAC5Q9UQL6 1122 aa22.39■■□□□ 1.17
LTBP3-202ENST00000322147 GRPEL1Q9HAV7 217 aa22.39■■□□□ 1.17
LTBP3-202ENST00000322147 ARHGEF12Q9NZN5 1544 aa22.38■■□□□ 1.17
LTBP3-202ENST00000322147 TBC1D32Q96NH3 1257 aa22.38■■□□□ 1.17
LTBP3-202ENST00000322147 NKTRP30414 1462 aaKnown RBP22.38■■□□□ 1.17
LTBP3-202ENST00000322147 ANXA1P04083 346 aa22.37■■□□□ 1.17
LTBP3-202ENST00000322147 CCDC30Q5VVM6 783 aa22.37■■□□□ 1.17
LTBP3-202ENST00000322147 ZNF530Q6P9A1 599 aaPredicted RBP22.37■■□□□ 1.17
LTBP3-202ENST00000322147 ADGRL1O94910 1474 aa22.37■■□□□ 1.17
LTBP3-202ENST00000322147 KRT24Q2M2I5 525 aa22.37■■□□□ 1.17
LTBP3-202ENST00000322147 SMC3Q9UQE7 1217 aa22.37■■□□□ 1.17
LTBP3-202ENST00000322147 GNAI2P04899 355 aa22.37■■□□□ 1.17
LTBP3-202ENST00000322147 CLASRPQ8N2M8 674 aaKnown RBP22.36■■□□□ 1.17
LTBP3-202ENST00000322147 CCDC85AQ96PX6 553 aaPredicted RBP22.36■■□□□ 1.17
LTBP3-202ENST00000322147 PTMSP20962 102 aa22.36■■□□□ 1.17
LTBP3-202ENST00000322147 FYB1O15117 783 aa22.35■■□□□ 1.17
LTBP3-202ENST00000322147 NUTM1Q86Y26 1132 aa22.35■■□□□ 1.17
LTBP3-202ENST00000322147 C14orf93Q9H972 538 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms