RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 PTMSP20962 102 aa22.34■■□□□ 1.17
PRKCB-202ENST00000321728 NCBP3Q53F19 620 aaKnown RBP22.34■■□□□ 1.17
PRKCB-202ENST00000321728 MROH2AA6NES4 1674 aa22.33■■□□□ 1.17
PRKCB-202ENST00000321728 CHD1LQ86WJ1 897 aa22.32■■□□□ 1.16
PRKCB-202ENST00000321728 MYO3AQ8NEV4 1616 aa22.32■■□□□ 1.16
PRKCB-202ENST00000321728 TPM2P07951 284 aa22.32■■□□□ 1.16
PRKCB-202ENST00000321728 ADGRL1O94910 1474 aa22.31■■□□□ 1.16
PRKCB-202ENST00000321728 DEPDC5O75140 1603 aa22.31■■□□□ 1.16
PRKCB-202ENST00000321728 CD2BP2O95400 341 aaKnown RBP22.3■■□□□ 1.16
PRKCB-202ENST00000321728 ANP32BQ92688 251 aaKnown RBP22.3■■□□□ 1.16
PRKCB-202ENST00000321728 TMPOP42166 694 aaKnown RBP22.3■■□□□ 1.16
PRKCB-202ENST00000321728 NASPP49321 788 aaPredicted RBP22.3■■□□□ 1.16
PRKCB-202ENST00000321728 CCDC173Q0VFZ6 552 aa22.3■■□□□ 1.16
PRKCB-202ENST00000321728 KIF1BO60333 1816 aa22.29■■□□□ 1.16
PRKCB-202ENST00000321728 GOLGA6L22H0YM25 854 aa22.29■■□□□ 1.16
PRKCB-202ENST00000321728 IPO8O15397 1037 aaKnown RBP22.29■■□□□ 1.16
PRKCB-202ENST00000321728 KIF2CQ99661 725 aa22.29■■□□□ 1.16
PRKCB-202ENST00000321728 K7ELQ4 463 aaPredicted RBP22.28■■□□□ 1.16
PRKCB-202ENST00000321728 BMP2KLQ5H9B9 411 aa22.28■■□□□ 1.16
PRKCB-202ENST00000321728 NEURL4Q96JN8 1562 aa22.28■■□□□ 1.16
PRKCB-202ENST00000321728 TRIM35Q9UPQ4 493 aa22.28■■□□□ 1.16
PRKCB-202ENST00000321728 SSFA2P28290 1259 aa22.28■■□□□ 1.16
PRKCB-202ENST00000321728 KIAA1211Q6ZU35 1233 aa22.28■■□□□ 1.16
PRKCB-202ENST00000321728 CABP2Q9NPB3 220 aa22.28■■□□□ 1.16
PRKCB-202ENST00000321728 ANKRD45Q5TZF3 282 aa22.27■■□□□ 1.16
PRKCB-202ENST00000321728 KIF16BQ96L93 1317 aa22.27■■□□□ 1.16
PRKCB-202ENST00000321728 RBM42Q9BTD8 480 aaKnown RBP22.27■■□□□ 1.16
PRKCB-202ENST00000321728 DDX49Q9Y6V7 483 aaKnown RBP22.26■■□□□ 1.15
PRKCB-202ENST00000321728 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
PRKCB-202ENST00000321728 STK26Q9P289 416 aa22.26■■□□□ 1.15
PRKCB-202ENST00000321728 MROH1Q8NDA8 1641 aa22.26■■□□□ 1.15
PRKCB-202ENST00000321728 CD109Q6YHK3 1445 aa22.25■■□□□ 1.15
PRKCB-202ENST00000321728 QRICH2Q9H0J4 1663 aa22.25■■□□□ 1.15
PRKCB-202ENST00000321728 ZSCAN30Q86W11 494 aa22.24■■□□□ 1.15
PRKCB-202ENST00000321728 PLEKHF1Q96S99 279 aa22.24■■□□□ 1.15
PRKCB-202ENST00000321728 ABCC11Q96J66 1382 aa22.24■■□□□ 1.15
PRKCB-202ENST00000321728 INO80Q9ULG1 1556 aaPredicted RBP22.24■■□□□ 1.15
PRKCB-202ENST00000321728 PPRC1Q5VV67 1664 aaKnown RBP22.24■■□□□ 1.15
PRKCB-202ENST00000321728 RIPK4P57078 832 aa22.24■■□□□ 1.15
PRKCB-202ENST00000321728 GAS2L2Q8NHY3 880 aa22.24■■□□□ 1.15
PRKCB-202ENST00000321728 PPP1R9BQ96SB3 815 aa22.24■■□□□ 1.15
PRKCB-202ENST00000321728 VWDEQ8N2E2 1590 aa22.23■■□□□ 1.15
PRKCB-202ENST00000321728 NRXN1Q9ULB1 1477 aa22.23■■□□□ 1.15
PRKCB-202ENST00000321728 MSNP26038 577 aaKnown RBP22.23■■□□□ 1.15
PRKCB-202ENST00000321728 TBC1D9Q6ZT07 1266 aa22.23■■□□□ 1.15
PRKCB-202ENST00000321728 IFT172Q9UG01 1749 aa22.23■■□□□ 1.15
PRKCB-202ENST00000321728 USP32Q8NFA0 1604 aa22.23■■□□□ 1.15
PRKCB-202ENST00000321728 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
PRKCB-202ENST00000321728 PDCL3Q9H2J4 239 aa22.22■■□□□ 1.15
PRKCB-202ENST00000321728 NSD2O96028 1365 aa22.21■■□□□ 1.15
PRKCB-202ENST00000321728 KLHL40Q2TBA0 621 aa22.21■■□□□ 1.15
PRKCB-202ENST00000321728 IL16Q14005 1332 aa22.2■■□□□ 1.14
PRKCB-202ENST00000321728 BAG4O95429 457 aaKnown RBP22.2■■□□□ 1.14
PRKCB-202ENST00000321728 GGNBP2Q9H3C7 697 aa22.2■■□□□ 1.14
PRKCB-202ENST00000321728 C1orf115Q9H7X2 142 aa22.2■■□□□ 1.14
PRKCB-202ENST00000321728 SETBP1Q9Y6X0 1596 aa22.2■■□□□ 1.14
PRKCB-202ENST00000321728 ANKRD36BQ8N2N9 1353 aa22.2■■□□□ 1.14
PRKCB-202ENST00000321728 EVC2Q86UK5 1308 aa22.2■■□□□ 1.14
PRKCB-202ENST00000321728 NCLP19338 710 aaKnown RBP22.2■■□□□ 1.14
PRKCB-202ENST00000321728 EFCAB6Q5THR3 1501 aa22.2■■□□□ 1.14
PRKCB-202ENST00000321728 UHRF1BP1LA0JNW5 1464 aa22.19■■□□□ 1.14
PRKCB-202ENST00000321728 ZC3H13Q5T200 1668 aaKnown RBP22.19■■□□□ 1.14
PRKCB-202ENST00000321728 GCC1Q96CN9 775 aa22.18■■□□□ 1.14
PRKCB-202ENST00000321728 CFAP74Q9C0B2 1584 aa22.18■■□□□ 1.14
PRKCB-202ENST00000321728 OFD1O75665 1012 aa22.17■■□□□ 1.14
PRKCB-202ENST00000321728 ALDH1L2Q3SY69 923 aa22.17■■□□□ 1.14
PRKCB-202ENST00000321728 MCTP1Q6DN14 999 aa22.16■■□□□ 1.14
PRKCB-202ENST00000321728 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.16■■□□□ 1.14
PRKCB-202ENST00000321728 PPIP5K1Q6PFW1 1433 aa22.15■■□□□ 1.14
PRKCB-202ENST00000321728 IBTKQ9P2D0 1353 aaPredicted RBP22.15■■□□□ 1.14
PRKCB-202ENST00000321728 CLEC17AQ6ZS10 378 aa22.15■■□□□ 1.14
PRKCB-202ENST00000321728 ABCA9Q8IUA7 1624 aa22.15■■□□□ 1.14
PRKCB-202ENST00000321728 NPATQ14207 1427 aa22.15■■□□□ 1.14
PRKCB-202ENST00000321728 FBLN1P23142 703 aa22.14■■□□□ 1.14
PRKCB-202ENST00000321728 CALD1Q05682 793 aaKnown RBP22.14■■□□□ 1.14
PRKCB-202ENST00000321728 CAVIN1Q6NZI2 390 aaKnown RBP22.14■■□□□ 1.14
PRKCB-202ENST00000321728 AK9Q5TCS8 1911 aa22.14■■□□□ 1.14
PRKCB-202ENST00000321728 ZBTB7BO15156 539 aaPredicted RBP22.14■■□□□ 1.13
PRKCB-202ENST00000321728 SRPK2P78362 688 aaKnown RBP22.14■■□□□ 1.13
PRKCB-202ENST00000321728 CDC45O75419 566 aa22.13■■□□□ 1.13
PRKCB-202ENST00000321728 RBM10P98175 930 aaKnown RBP22.13■■□□□ 1.13
PRKCB-202ENST00000321728 ADGRB1O14514 1584 aa22.12■■□□□ 1.13
PRKCB-202ENST00000321728 KIDINS220Q9ULH0 1771 aa22.12■■□□□ 1.13
PRKCB-202ENST00000321728 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
PRKCB-202ENST00000321728 CHMP4BQ9H444 224 aaKnown RBP22.12■■□□□ 1.13
PRKCB-202ENST00000321728 ADGRB3O60242 1522 aa22.11■■□□□ 1.13
PRKCB-202ENST00000321728 MINK1Q8N4C8 1332 aaPredicted RBP22.11■■□□□ 1.13
PRKCB-202ENST00000321728 ZNF445P59923 1031 aa22.11■■□□□ 1.13
PRKCB-202ENST00000321728 ZSCAN23Q3MJ62 389 aa22.11■■□□□ 1.13
PRKCB-202ENST00000321728 R3HCC1Q9Y3T6 440 aaKnown RBP22.11■■□□□ 1.13
PRKCB-202ENST00000321728 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
PRKCB-202ENST00000321728 NUCB2P80303 420 aa22.1■■□□□ 1.13
PRKCB-202ENST00000321728 PUS7Q96PZ0 661 aaKnown RBP22.09■■□□□ 1.13
PRKCB-202ENST00000321728 RAPGEF3O95398 923 aa22.09■■□□□ 1.13
PRKCB-202ENST00000321728 RABEP1Q15276 862 aa22.09■■□□□ 1.13
PRKCB-202ENST00000321728 A0A1W2PP64 1363 aa22.09■■□□□ 1.13
PRKCB-202ENST00000321728 TULP4Q9NRJ4 1543 aa22.08■■□□□ 1.13
PRKCB-202ENST00000321728 SIRT2Q8IXJ6 389 aa22.08■■□□□ 1.12
PRKCB-202ENST00000321728 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.12
PRKCB-202ENST00000321728 MED14O60244 1454 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms