RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 USP47Q96K76 1375 aa14.44□□□□□ -0.1
FARP1-201ENST00000319562 SLC26A8Q96RN1 970 aa14.44□□□□□ -0.1
FARP1-201ENST00000319562 GIMAP7Q8NHV1 300 aa14.43□□□□□ -0.1
FARP1-201ENST00000319562 PRPF40AO75400 957 aaKnown RBP14.43□□□□□ -0.1
FARP1-201ENST00000319562 KRT18P05783 430 aaKnown RBP14.42□□□□□ -0.1
FARP1-201ENST00000319562 ANKRD1Q15327 319 aa14.42□□□□□ -0.1
FARP1-201ENST00000319562 TBC1D2BQ9UPU7 963 aa14.42□□□□□ -0.1
FARP1-201ENST00000319562 UQCRHLA0A096LP55 91 aa14.42□□□□□ -0.1
FARP1-201ENST00000319562 UQCRHP07919 91 aa14.42□□□□□ -0.1
FARP1-201ENST00000319562 AEBP1Q8IUX7 1158 aa14.42□□□□□ -0.1
FARP1-201ENST00000319562 NEUROD6Q96NK8 337 aa14.42□□□□□ -0.1
FARP1-201ENST00000319562 CCDC91Q7Z6B0 441 aa14.42□□□□□ -0.1
FARP1-201ENST00000319562 MSH5O43196 834 aa14.42□□□□□ -0.1
FARP1-201ENST00000319562 STK38Q15208 465 aa14.42□□□□□ -0.1
FARP1-201ENST00000319562 IKQ13123 557 aaPredicted RBP14.41□□□□□ -0.1
FARP1-201ENST00000319562 UBTFL1P0CB47 393 aaPredicted RBP14.41□□□□□ -0.1
FARP1-201ENST00000319562 TNMDQ9H2S6 317 aa14.41□□□□□ -0.1
FARP1-201ENST00000319562 KANK4Q5T7N3 995 aaPredicted RBP14.41□□□□□ -0.1
FARP1-201ENST00000319562 NECTIN2Q92692 538 aa14.41□□□□□ -0.1
FARP1-201ENST00000319562 DESP17661 470 aa14.41□□□□□ -0.1
FARP1-201ENST00000319562 PDCL3Q9H2J4 239 aa14.4□□□□□ -0.1
FARP1-201ENST00000319562 NUTM2FA1L443 756 aa14.4□□□□□ -0.1
FARP1-201ENST00000319562 RIC3Q7Z5B4 369 aa14.4□□□□□ -0.1
FARP1-201ENST00000319562 VGFO15240 615 aaPredicted RBP14.4□□□□□ -0.1
FARP1-201ENST00000319562 TSPYL4Q9UJ04 414 aa14.4□□□□□ -0.1
FARP1-201ENST00000319562 FSD1Q9BTV5 496 aa14.39□□□□□ -0.11
FARP1-201ENST00000319562 GBP3Q9H0R5 595 aa14.39□□□□□ -0.11
FARP1-201ENST00000319562 NEK4P51957 841 aa14.39□□□□□ -0.11
FARP1-201ENST00000319562 FYB1O15117 783 aa14.39□□□□□ -0.11
FARP1-201ENST00000319562 LRRFIP2Q9Y608 721 aaKnown RBP14.39□□□□□ -0.11
FARP1-201ENST00000319562 FIBPO43427 364 aa14.39□□□□□ -0.11
FARP1-201ENST00000319562 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
FARP1-201ENST00000319562 WDR33Q9C0J8 1336 aaKnown RBP14.38□□□□□ -0.11
FARP1-201ENST00000319562 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.38□□□□□ -0.11
FARP1-201ENST00000319562 NUTM2DQ5VT03 806 aaPredicted RBP14.38□□□□□ -0.11
FARP1-201ENST00000319562 SOGA1O94964 1423 aa14.38□□□□□ -0.11
FARP1-201ENST00000319562 SHTN1A0MZ66 631 aa14.38□□□□□ -0.11
FARP1-201ENST00000319562 PDIA4P13667 645 aaKnown RBP14.38□□□□□ -0.11
FARP1-201ENST00000319562 MCM3P25205 808 aa14.38□□□□□ -0.11
FARP1-201ENST00000319562 CCDC102AQ96A19 550 aa14.38□□□□□ -0.11
FARP1-201ENST00000319562 DDX11Q96FC9 970 aa14.38□□□□□ -0.11
FARP1-201ENST00000319562 FAM193AP78312 1265 aa14.37□□□□□ -0.11
FARP1-201ENST00000319562 ERC1Q8IUD2 1116 aa14.37□□□□□ -0.11
FARP1-201ENST00000319562 KIF2AO00139 706 aaPredicted RBP14.37□□□□□ -0.11
FARP1-201ENST00000319562 MAP9Q49MG5 647 aa14.37□□□□□ -0.11
FARP1-201ENST00000319562 JAKMIP3Q5VZ66 844 aa14.37□□□□□ -0.11
FARP1-201ENST00000319562 KRT85P78386 507 aa14.37□□□□□ -0.11
FARP1-201ENST00000319562 FAM107BQ9H098 131 aa14.37□□□□□ -0.11
FARP1-201ENST00000319562 MAP2K1Q02750 393 aaPredicted RBP14.37□□□□□ -0.11
FARP1-201ENST00000319562 GRPEL1Q9HAV7 217 aa14.37□□□□□ -0.11
FARP1-201ENST00000319562 WASHC2AQ641Q2 1341 aa14.37□□□□□ -0.11
FARP1-201ENST00000319562 CCDC148Q8NFR7 591 aa14.36□□□□□ -0.11
FARP1-201ENST00000319562 CRACR2AQ9BSW2 395 aa14.36□□□□□ -0.11
FARP1-201ENST00000319562 GOLGA6L10A0A0M3HER8 536 aa14.36□□□□□ -0.11
FARP1-201ENST00000319562 TRIM22Q8IYM9 498 aa14.36□□□□□ -0.11
FARP1-201ENST00000319562 NF2P35240 595 aa14.36□□□□□ -0.11
FARP1-201ENST00000319562 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.117e-7■■■□□ 15.6
FARP1-201ENST00000319562 CFAP45Q9UL16 551 aa14.36□□□□□ -0.11
FARP1-201ENST00000319562 GNAI3P08754 354 aa14.35□□□□□ -0.11
FARP1-201ENST00000319562 ME1P48163 572 aa14.35□□□□□ -0.11
FARP1-201ENST00000319562 TANGO6Q9C0B7 1094 aa14.35□□□□□ -0.11
FARP1-201ENST00000319562 BRPF3Q9ULD4 1205 aa14.35□□□□□ -0.11
FARP1-201ENST00000319562 STAMBPO95630 424 aa14.35□□□□□ -0.11
FARP1-201ENST00000319562 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
FARP1-201ENST00000319562 MIA2Q96PC5 1412 aa14.35□□□□□ -0.11
FARP1-201ENST00000319562 ERICH4A6NGS2 130 aa14.35□□□□□ -0.11
FARP1-201ENST00000319562 SMTNL1A8MU46 457 aa14.34□□□□□ -0.11
FARP1-201ENST00000319562 ATP2B1P20020 1258 aa14.34□□□□□ -0.11
FARP1-201ENST00000319562 UBXN4Q92575 508 aa14.34□□□□□ -0.11
FARP1-201ENST00000319562 ZNF397Q8NF99 534 aaPredicted RBP14.34□□□□□ -0.11
FARP1-201ENST00000319562 SYTL4Q96C24 671 aaPredicted RBP14.34□□□□□ -0.11
FARP1-201ENST00000319562 KIAA1328Q86T90 577 aa14.34□□□□□ -0.11
FARP1-201ENST00000319562 CEBPZQ03701 1054 aaKnown RBP14.34□□□□□ -0.11
FARP1-201ENST00000319562 TMCO3Q6UWJ1 677 aa14.34□□□□□ -0.11
FARP1-201ENST00000319562 CYP46A1Q9Y6A2 500 aa14.34□□□□□ -0.11
FARP1-201ENST00000319562 PPM1EQ8WY54 764 aa14.33□□□□□ -0.11
FARP1-201ENST00000319562 EPB41L2O43491 1005 aaKnown RBP14.33□□□□□ -0.11
FARP1-201ENST00000319562 TAF4BQ92750 862 aa14.33□□□□□ -0.12
FARP1-201ENST00000319562 GCC1Q96CN9 775 aa14.33□□□□□ -0.12
FARP1-201ENST00000319562 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.33□□□□□ -0.12
FARP1-201ENST00000319562 MICALCLQ6ZW33 695 aa14.33□□□□□ -0.12
FARP1-201ENST00000319562 CALCOCO1Q9P1Z2 691 aa14.32□□□□□ -0.12
FARP1-201ENST00000319562 PSME1Q06323 249 aa14.32□□□□□ -0.12
FARP1-201ENST00000319562 IMMTQ16891 758 aaKnown RBP14.32□□□□□ -0.12
FARP1-201ENST00000319562 PANK1Q8TE04 598 aa14.32□□□□□ -0.12
FARP1-201ENST00000319562 BMP2KQ9NSY1 1161 aaPredicted RBP14.32□□□□□ -0.12
FARP1-201ENST00000319562 MTMR7Q9Y216 660 aa14.32□□□□□ -0.12
FARP1-201ENST00000319562 CDKL5O76039 1030 aa14.32□□□□□ -0.12
FARP1-201ENST00000319562 CCDC30Q5VVM6 783 aa14.32□□□□□ -0.12
FARP1-201ENST00000319562 CEP57L1Q8IYX8 460 aa14.32□□□□□ -0.12
FARP1-201ENST00000319562 CETN2P41208 172 aa14.31□□□□□ -0.12
FARP1-201ENST00000319562 TRIM21P19474 475 aaKnown RBP14.31□□□□□ -0.12
FARP1-201ENST00000319562 NOL7Q9UMY1 257 aaKnown RBP14.31□□□□□ -0.12
FARP1-201ENST00000319562 SPATA24Q86W54 205 aa14.31□□□□□ -0.12
FARP1-201ENST00000319562 CEP63Q96MT8 703 aa14.31□□□□□ -0.12
FARP1-201ENST00000319562 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
FARP1-201ENST00000319562 ARHGAP29Q52LW3 1261 aa14.3□□□□□ -0.12
FARP1-201ENST00000319562 ESPNB1AK53 854 aa14.3□□□□□ -0.12
FARP1-201ENST00000319562 SURF6O75683 361 aaKnown RBP14.3□□□□□ -0.12
FARP1-201ENST00000319562 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms