RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 PPP4R2Q9NY27 417 aa16.41■□□□□ 0.22
NBPF3-201ENST00000318220 NUP153P49790 1475 aaKnown RBP16.41■□□□□ 0.22
NBPF3-201ENST00000318220 MARCH6O60337 910 aa16.41■□□□□ 0.22
NBPF3-201ENST00000318220 PCF11O94913 1555 aaKnown RBP16.41■□□□□ 0.22
NBPF3-201ENST00000318220 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
NBPF3-201ENST00000318220 ANKRD24Q8TF21 1146 aa16.41■□□□□ 0.22
NBPF3-201ENST00000318220 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
NBPF3-201ENST00000318220 API5Q9BZZ5 524 aaKnown RBP16.41■□□□□ 0.22
NBPF3-201ENST00000318220 GRM1Q13255 1194 aa16.4■□□□□ 0.22
NBPF3-201ENST00000318220 NAIPQ13075 1403 aa16.4■□□□□ 0.22
NBPF3-201ENST00000318220 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
NBPF3-201ENST00000318220 WDR62O43379 1518 aa16.4■□□□□ 0.22
NBPF3-201ENST00000318220 PLCB2Q00722 1185 aa16.4■□□□□ 0.22
NBPF3-201ENST00000318220 SLC4A2P04920 1241 aa16.39■□□□□ 0.22
NBPF3-201ENST00000318220 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.22
NBPF3-201ENST00000318220 MCM10Q7L590 875 aa16.39■□□□□ 0.22
NBPF3-201ENST00000318220 CCDC7Q96M83 1385 aa16.39■□□□□ 0.21
NBPF3-201ENST00000318220 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
NBPF3-201ENST00000318220 C14orf93Q9H972 538 aaKnown RBP16.39■□□□□ 0.21
NBPF3-201ENST00000318220 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
NBPF3-201ENST00000318220 TFCP2L1Q9NZI6 479 aa16.38■□□□□ 0.21
NBPF3-201ENST00000318220 SUPT6HQ7KZ85 1726 aaKnown RBP16.38■□□□□ 0.21
NBPF3-201ENST00000318220 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
NBPF3-201ENST00000318220 NUP160Q12769 1436 aa16.38■□□□□ 0.21
NBPF3-201ENST00000318220 FAM98CQ17RN3 349 aaKnown RBP16.38■□□□□ 0.21
NBPF3-201ENST00000318220 RIMS2Q9UQ26 1411 aa16.37■□□□□ 0.21
NBPF3-201ENST00000318220 GPTP24298 496 aa16.37■□□□□ 0.21
NBPF3-201ENST00000318220 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
NBPF3-201ENST00000318220 ZNF622Q969S3 477 aaKnown RBP eCLIP16.37■□□□□ 0.21
NBPF3-201ENST00000318220 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
NBPF3-201ENST00000318220 TBX22Q9Y458 520 aa16.36■□□□□ 0.21
NBPF3-201ENST00000318220 SIL1Q9H173 461 aa16.36■□□□□ 0.21
NBPF3-201ENST00000318220 RFC4P35249 363 aa16.36■□□□□ 0.21
NBPF3-201ENST00000318220 EXOSC9Q06265 439 aaKnown RBP16.36■□□□□ 0.21
NBPF3-201ENST00000318220 USP21Q9UK80 565 aa16.35■□□□□ 0.21
NBPF3-201ENST00000318220 TSHZ2Q9NRE2 1034 aa16.35■□□□□ 0.21
NBPF3-201ENST00000318220 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
NBPF3-201ENST00000318220 IKQ13123 557 aaPredicted RBP16.35■□□□□ 0.21
NBPF3-201ENST00000318220 RASSF8Q8NHQ8 419 aa16.35■□□□□ 0.21
NBPF3-201ENST00000318220 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
NBPF3-201ENST00000318220 GNAT3A8MTJ3 354 aa16.34■□□□□ 0.21
NBPF3-201ENST00000318220 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
NBPF3-201ENST00000318220 MFAP1P55081 439 aaKnown RBP16.34■□□□□ 0.21
NBPF3-201ENST00000318220 DZIP1LQ8IYY4 767 aaKnown RBP16.33■□□□□ 0.21
NBPF3-201ENST00000318220 ZSCAN29Q8IWY8 852 aaPredicted RBP16.33■□□□□ 0.2
NBPF3-201ENST00000318220 DIAPH3Q9NSV4 1193 aa16.33■□□□□ 0.2
NBPF3-201ENST00000318220 SYCP2Q9BX26 1530 aa16.33■□□□□ 0.2
NBPF3-201ENST00000318220 ROCK1Q13464 1354 aa16.33■□□□□ 0.2
NBPF3-201ENST00000318220 NSD3Q9BZ95 1437 aa16.33■□□□□ 0.2
NBPF3-201ENST00000318220 LTKP29376 864 aa16.33■□□□□ 0.2
NBPF3-201ENST00000318220 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
NBPF3-201ENST00000318220 ZBTB3Q9H5J0 574 aa16.33■□□□□ 0.2
NBPF3-201ENST00000318220 GCP02774 474 aa16.32■□□□□ 0.2
NBPF3-201ENST00000318220 ATP2B2Q01814 1243 aa16.32■□□□□ 0.2
NBPF3-201ENST00000318220 ZNF335Q9H4Z2 1342 aaPredicted RBP16.32■□□□□ 0.2
NBPF3-201ENST00000318220 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
NBPF3-201ENST00000318220 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
NBPF3-201ENST00000318220 SPINK5Q9NQ38 1064 aaPredicted RBP16.32■□□□□ 0.2
NBPF3-201ENST00000318220 ZNF652Q9Y2D9 606 aa16.32■□□□□ 0.2
NBPF3-201ENST00000318220 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
NBPF3-201ENST00000318220 CCDC57Q2TAC2 916 aa16.31■□□□□ 0.2
NBPF3-201ENST00000318220 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
NBPF3-201ENST00000318220 HMGB2P26583 209 aaKnown RBP16.31■□□□□ 0.2
NBPF3-201ENST00000318220 LRRFIP1Q32MZ4 808 aaKnown RBP16.3■□□□□ 0.2
NBPF3-201ENST00000318220 STK11IPQ8N1F8 1099 aa16.3■□□□□ 0.2
NBPF3-201ENST00000318220 CHAF1AQ13111 956 aaPredicted RBP16.29■□□□□ 0.2
NBPF3-201ENST00000318220 C6orf229H3BNL8 230 aa16.29■□□□□ 0.2
NBPF3-201ENST00000318220 AMOTQ4VCS5 1084 aa16.29■□□□□ 0.2
NBPF3-201ENST00000318220 CHMP4CQ96CF2 233 aa16.29■□□□□ 0.2
NBPF3-201ENST00000318220 TTLL12Q14166 644 aaPredicted RBP16.29■□□□□ 0.2
NBPF3-201ENST00000318220 CNTLNQ9NXG0 1405 aa16.29■□□□□ 0.2
NBPF3-201ENST00000318220 ATP10AO60312 1499 aa16.28■□□□□ 0.2
NBPF3-201ENST00000318220 POLD1P28340 1107 aa16.28■□□□□ 0.2
NBPF3-201ENST00000318220 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
NBPF3-201ENST00000318220 ADAMTS12P58397 1594 aa16.28■□□□□ 0.2
NBPF3-201ENST00000318220 YEATS2Q9ULM3 1422 aa16.28■□□□□ 0.2
NBPF3-201ENST00000318220 TCEAL9Q9UHQ7 104 aa16.28■□□□□ 0.2
NBPF3-201ENST00000318220 AKAP17AQ02040 695 aaKnown RBP16.27■□□□□ 0.2
NBPF3-201ENST00000318220 SLC39A6Q13433 755 aa16.27■□□□□ 0.2
NBPF3-201ENST00000318220 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
NBPF3-201ENST00000318220 DNAJC2Q99543 621 aaKnown RBP16.27■□□□□ 0.2
NBPF3-201ENST00000318220 ANKIB1Q9P2G1 1089 aa16.27■□□□□ 0.2
NBPF3-201ENST00000318220 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
NBPF3-201ENST00000318220 HSCBQ8IWL3 235 aa16.27■□□□□ 0.19
NBPF3-201ENST00000318220 TTC21BQ7Z4L5 1316 aa16.27■□□□□ 0.19
NBPF3-201ENST00000318220 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.19
NBPF3-201ENST00000318220 FAM182BQ5T319 152 aa16.27■□□□□ 0.19
NBPF3-201ENST00000318220 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
NBPF3-201ENST00000318220 APBA3O96018 575 aa16.26■□□□□ 0.19
NBPF3-201ENST00000318220 ABCF2Q9UG63 623 aa16.26■□□□□ 0.19
NBPF3-201ENST00000318220 ANXA1P04083 346 aa16.26■□□□□ 0.19
NBPF3-201ENST00000318220 CLASRPQ8N2M8 674 aaKnown RBP16.26■□□□□ 0.19
NBPF3-201ENST00000318220 RPGRQ92834 1020 aaKnown RBP16.26■□□□□ 0.19
NBPF3-201ENST00000318220 QTRT2Q9H974 415 aaKnown RBP16.26■□□□□ 0.19
NBPF3-201ENST00000318220 DDX19BQ9UMR2 479 aa16.26■□□□□ 0.19
NBPF3-201ENST00000318220 SRCIN1Q9C0H9 1055 aa16.25■□□□□ 0.19
NBPF3-201ENST00000318220 TRDNQ13061 729 aa16.25■□□□□ 0.19
NBPF3-201ENST00000318220 SYNE3Q6ZMZ3 975 aa16.25■□□□□ 0.19
NBPF3-201ENST00000318220 PIP4K2AP48426 406 aaPredicted RBP16.25■□□□□ 0.19
NBPF3-201ENST00000318220 C1orf115Q9H7X2 142 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms