RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 ESCO1Q5FWF5 840 aa10.94□□□□□ -0.66
PDLIM5-201ENST00000317968 ZNF428Q96B54 188 aa10.94□□□□□ -0.66
PDLIM5-201ENST00000317968 C19orf44Q9H6X5 657 aa10.93□□□□□ -0.66
PDLIM5-201ENST00000317968 G3V3G9 751 aa10.93□□□□□ -0.66
PDLIM5-201ENST00000317968 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
PDLIM5-201ENST00000317968 FTSJ3Q8IY81 847 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-201ENST00000317968 ABTB2Q8N961 1025 aa10.93□□□□□ -0.66
PDLIM5-201ENST00000317968 LAS1LQ9Y4W2 734 aaKnown RBP10.93□□□□□ -0.66
PDLIM5-201ENST00000317968 HDAC5Q9UQL6 1122 aa10.93□□□□□ -0.66
PDLIM5-201ENST00000317968 LTKP29376 864 aa10.93□□□□□ -0.66
PDLIM5-201ENST00000317968 GAS2L2Q8NHY3 880 aa10.93□□□□□ -0.66
PDLIM5-201ENST00000317968 ALKQ9UM73 1620 aa10.92□□□□□ -0.66
PDLIM5-201ENST00000317968 GNAI1P63096 354 aa10.92□□□□□ -0.66
PDLIM5-201ENST00000317968 NPHP4O75161 1426 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-201ENST00000317968 PIK3C2BO00750 1634 aa10.92□□□□□ -0.66
PDLIM5-201ENST00000317968 MSH6P52701 1360 aa10.92□□□□□ -0.66
PDLIM5-201ENST00000317968 ACEP12821 1306 aa10.91□□□□□ -0.66
PDLIM5-201ENST00000317968 TECPR2O15040 1411 aa10.91□□□□□ -0.66
PDLIM5-201ENST00000317968 ANKARQ7Z5J8 1434 aa10.91□□□□□ -0.66
PDLIM5-201ENST00000317968 MROH2AA6NES4 1674 aa10.91□□□□□ -0.66
PDLIM5-201ENST00000317968 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
PDLIM5-201ENST00000317968 FYB1O15117 783 aa10.9□□□□□ -0.66
PDLIM5-201ENST00000317968 TCP11L2Q8N4U5 519 aa10.9□□□□□ -0.66
PDLIM5-201ENST00000317968 MSH5O43196 834 aa10.9□□□□□ -0.66
PDLIM5-201ENST00000317968 DIP2AQ14689 1571 aa10.9□□□□□ -0.66
PDLIM5-201ENST00000317968 SETD1BQ9UPS6 1966 aaKnown RBP10.9□□□□□ -0.66
PDLIM5-201ENST00000317968 CCDC146Q8IYE0 955 aa10.89□□□□□ -0.67
PDLIM5-201ENST00000317968 TMEM131LA2VDJ0 1609 aa10.89□□□□□ -0.67
PDLIM5-201ENST00000317968 PMFBP1Q8TBY8 1022 aa10.89□□□□□ -0.67
PDLIM5-201ENST00000317968 METP08581 1390 aa10.89□□□□□ -0.67
PDLIM5-201ENST00000317968 KIF13AQ9H1H9 1805 aa10.89□□□□□ -0.67
PDLIM5-201ENST00000317968 PTCH1Q13635 1447 aa10.89□□□□□ -0.67
PDLIM5-201ENST00000317968 CASC1Q6TDU7 716 aa10.89□□□□□ -0.67
PDLIM5-201ENST00000317968 RIPK4P57078 832 aa10.88□□□□□ -0.67
PDLIM5-201ENST00000317968 OS9Q13438 667 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-201ENST00000317968 NPHP3Q7Z494 1330 aa10.88□□□□□ -0.67
PDLIM5-201ENST00000317968 HSP90AA1P07900 732 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-201ENST00000317968 CARD14Q9BXL6 1004 aa10.88□□□□□ -0.67
PDLIM5-201ENST00000317968 IQGAP1P46940 1657 aa10.88□□□□□ -0.67
PDLIM5-201ENST00000317968 CCDC27Q2M243 656 aa10.88□□□□□ -0.67
PDLIM5-201ENST00000317968 C1orf141Q5JVX7 400 aa10.88□□□□□ -0.67
PDLIM5-201ENST00000317968 PPLO60437 1756 aa10.88□□□□□ -0.67
PDLIM5-201ENST00000317968 IL16Q14005 1332 aa10.87□□□□□ -0.67
PDLIM5-201ENST00000317968 POLR1AO95602 1720 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-201ENST00000317968 ADGRB1O14514 1584 aa10.87□□□□□ -0.67
PDLIM5-201ENST00000317968 GTF2E1P29083 439 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-201ENST00000317968 STK31Q9BXU1 1019 aa10.87□□□□□ -0.67
PDLIM5-201ENST00000317968 KIF16BQ96L93 1317 aa10.86□□□□□ -0.67
PDLIM5-201ENST00000317968 AATKQ6ZMQ8 1374 aa10.86□□□□□ -0.67
PDLIM5-201ENST00000317968 KIF24Q5T7B8 1368 aa10.86□□□□□ -0.67
PDLIM5-201ENST00000317968 RRP1P56182 461 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-201ENST00000317968 PLEKHO1Q53GL0 409 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-201ENST00000317968 MED14O60244 1454 aa10.85□□□□□ -0.67
PDLIM5-201ENST00000317968 SLIT1O75093 1534 aa10.85□□□□□ -0.67
PDLIM5-201ENST00000317968 NME9Q86XW9 330 aa10.85□□□□□ -0.67
PDLIM5-201ENST00000317968 CFAP44Q96MT7 982 aa10.85□□□□□ -0.67
PDLIM5-201ENST00000317968 PRKAR2BP31323 418 aa10.85□□□□□ -0.67
PDLIM5-201ENST00000317968 ARHGAP23Q9P227 1491 aa10.85□□□□□ -0.67
PDLIM5-201ENST00000317968 RTL5Q5HYW3 569 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-201ENST00000317968 NFE2L2Q16236 605 aa10.85□□□□□ -0.67
PDLIM5-201ENST00000317968 RAPGEF4Q8WZA2 1011 aa10.84□□□□□ -0.67
PDLIM5-201ENST00000317968 ZNF330Q9Y3S2 320 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-201ENST00000317968 PIP4K2BP78356 416 aa10.84□□□□□ -0.67
PDLIM5-201ENST00000317968 CCDC184Q52MB2 194 aa10.84□□□□□ -0.67
PDLIM5-201ENST00000317968 FRAT1Q92837 279 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-201ENST00000317968 FLT4P35916 1363 aa10.84□□□□□ -0.67
PDLIM5-201ENST00000317968 ZKSCAN2Q63HK3 967 aa10.84□□□□□ -0.67
PDLIM5-201ENST00000317968 API5Q9BZZ5 524 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-201ENST00000317968 SMC4Q9NTJ3 1288 aa10.84□□□□□ -0.67
PDLIM5-201ENST00000317968 TEFQ10587 303 aa10.83□□□□□ -0.68
PDLIM5-201ENST00000317968 CEP170BQ9Y4F5 1589 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-201ENST00000317968 NCKAP5LQ9HCH0 1330 aa10.83□□□□□ -0.68
PDLIM5-201ENST00000317968 ROBO2Q9HCK4 1378 aa10.83□□□□□ -0.68
PDLIM5-201ENST00000317968 FER1L4A9Z1Z3 1794 aa10.83□□□□□ -0.68
PDLIM5-201ENST00000317968 ADAMTS13Q76LX8 1427 aa10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 NCOA3Q9Y6Q9 1424 aa10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 PTPRMP28827 1452 aa10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 CDK11BP21127 795 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 HSP90AB1P08238 724 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 PDE3AQ14432 1141 aa10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 AMOTQ4VCS5 1084 aa10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 KRT28Q7Z3Y7 464 aa10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 RWDD1Q9H446 243 aaPredicted RBP10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 TMPOP42166 694 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 NKTRP30414 1462 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-201ENST00000317968 SLFN5Q08AF3 891 aa10.81□□□□□ -0.68
PDLIM5-201ENST00000317968 MYO3AQ8NEV4 1616 aa10.81□□□□□ -0.68
PDLIM5-201ENST00000317968 PLEKHH1Q9ULM0 1364 aa10.81□□□□□ -0.68
PDLIM5-201ENST00000317968 QRICH2Q9H0J4 1663 aa10.81□□□□□ -0.68
PDLIM5-201ENST00000317968 HTATSF1O43719 755 aaKnown RBP10.81□□□□□ -0.68
PDLIM5-201ENST00000317968 LTV1Q96GA3 475 aaPredicted RBP10.81□□□□□ -0.68
PDLIM5-201ENST00000317968 TULP4Q9NRJ4 1543 aa10.81□□□□□ -0.68
PDLIM5-201ENST00000317968 RRP7AQ9Y3A4 280 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-201ENST00000317968 BLMP54132 1417 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-201ENST00000317968 TOM1O60784 492 aa10.8□□□□□ -0.68
PDLIM5-201ENST00000317968 SULT6B1Q6IMI4 303 aa10.8□□□□□ -0.68
PDLIM5-201ENST00000317968 WWC1Q8IX03 1113 aa10.8□□□□□ -0.68
PDLIM5-201ENST00000317968 ADGRL3Q9HAR2 1447 aa10.8□□□□□ -0.68
PDLIM5-201ENST00000317968 TTC5Q8N0Z6 440 aa10.8□□□□□ -0.68
PDLIM5-201ENST00000317968 POLKQ9UBT6 870 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms