RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 ZKSCAN1P17029 563 aaPredicted RBP22.13■■□□□ 1.13
SLC12A4-201ENST00000316341 SPC24Q8NBT2 197 aa22.13■■□□□ 1.13
SLC12A4-201ENST00000316341 SF3A1Q15459 793 aaKnown RBP22.12■■□□□ 1.13
SLC12A4-201ENST00000316341 FAM184AQ8NB25 1140 aa22.12■■□□□ 1.13
SLC12A4-201ENST00000316341 MAGI1Q96QZ7 1491 aaPredicted RBP22.12■■□□□ 1.13
SLC12A4-201ENST00000316341 SMARCA5O60264 1052 aaPredicted RBP22.12■■□□□ 1.13
SLC12A4-201ENST00000316341 SLC4A2P04920 1241 aa22.12■■□□□ 1.13
SLC12A4-201ENST00000316341 RRAGDQ9NQL2 400 aaPredicted RBP22.12■■□□□ 1.13
SLC12A4-201ENST00000316341 CCDC141Q6ZP82 1450 aa22.12■■□□□ 1.13
SLC12A4-201ENST00000316341 GPATCH8Q9UKJ3 1502 aaKnown RBP22.11■■□□□ 1.13
SLC12A4-201ENST00000316341 ERC2O15083 957 aa22.11■■□□□ 1.13
SLC12A4-201ENST00000316341 KDM2BQ8NHM5 1336 aa22.11■■□□□ 1.13
SLC12A4-201ENST00000316341 MAP7D2Q96T17 732 aa22.11■■□□□ 1.13
SLC12A4-201ENST00000316341 C9orf78Q9NZ63 289 aaPredicted RBP22.1■■□□□ 1.13
SLC12A4-201ENST00000316341 URB2Q14146 1524 aaKnown RBP22.1■■□□□ 1.13
SLC12A4-201ENST00000316341 CWC22Q9HCG8 908 aaKnown RBP22.09■■□□□ 1.13
SLC12A4-201ENST00000316341 MAP4K4O95819 1239 aaPredicted RBP22.09■■□□□ 1.13
SLC12A4-201ENST00000316341 DCTN1Q14203 1278 aa22.09■■□□□ 1.13
SLC12A4-201ENST00000316341 DMRT2Q9Y5R5 561 aa22.09■■□□□ 1.13
SLC12A4-201ENST00000316341 SURF6O75683 361 aaKnown RBP22.08■■□□□ 1.13
SLC12A4-201ENST00000316341 IFIT2P09913 472 aaKnown RBP22.08■■□□□ 1.13
SLC12A4-201ENST00000316341 RBM42Q9BTD8 480 aaKnown RBP22.08■■□□□ 1.13
SLC12A4-201ENST00000316341 TEX14Q8IWB6 1497 aa22.08■■□□□ 1.13
SLC12A4-201ENST00000316341 RUFY2Q8WXA3 655 aa22.08■■□□□ 1.13
SLC12A4-201ENST00000316341 TBC1D9Q6ZT07 1266 aa22.08■■□□□ 1.12
SLC12A4-201ENST00000316341 SULT6B1Q6IMI4 303 aa22.07■■□□□ 1.12
SLC12A4-201ENST00000316341 CLCN1P35523 988 aa22.07■■□□□ 1.12
SLC12A4-201ENST00000316341 UPF3BQ9BZI7 483 aaKnown RBP22.07■■□□□ 1.12
SLC12A4-201ENST00000316341 UBTFL1P0CB47 393 aaPredicted RBP22.06■■□□□ 1.12
SLC12A4-201ENST00000316341 RRS1Q15050 365 aaKnown RBP22.06■■□□□ 1.12
SLC12A4-201ENST00000316341 PRAG1Q86YV5 1406 aa22.06■■□□□ 1.12
SLC12A4-201ENST00000316341 TCOF1Q13428 1488 aaKnown RBP22.06■■□□□ 1.12
SLC12A4-201ENST00000316341 GORABQ5T7V8 394 aa22.06■■□□□ 1.12
SLC12A4-201ENST00000316341 ZNF428Q96B54 188 aa22.06■■□□□ 1.12
SLC12A4-201ENST00000316341 CDK19Q9BWU1 502 aa22.06■■□□□ 1.12
SLC12A4-201ENST00000316341 TPM4P67936 248 aa22.06■■□□□ 1.12
SLC12A4-201ENST00000316341 EXOC6BQ9Y2D4 811 aa22.05■■□□□ 1.12
SLC12A4-201ENST00000316341 RBM27Q9P2N5 1060 aaKnown RBP22.04■■□□□ 1.12
SLC12A4-201ENST00000316341 TEFQ10587 303 aa22.04■■□□□ 1.12
SLC12A4-201ENST00000316341 BAG4O95429 457 aaKnown RBP22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 NUTM2GQ5VZR2 741 aa22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 SASS6Q6UVJ0 657 aa22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 ZMYND15Q9H091 742 aa22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 PRDM10Q9NQV6 1147 aa22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 PZPP20742 1482 aa22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 SPATA31E1Q6ZUB1 1445 aa22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 TNNT3P45378 269 aaPredicted RBP22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 CCAR2Q8N163 923 aaKnown RBP22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 HDAC5Q9UQL6 1122 aa22.03■■□□□ 1.12
SLC12A4-201ENST00000316341 FBLN1P23142 703 aa22.02■■□□□ 1.12
SLC12A4-201ENST00000316341 A0A0U1RQG5 324 aaPredicted RBP22.02■■□□□ 1.12
SLC12A4-201ENST00000316341 MCM2P49736 904 aa22.02■■□□□ 1.12
SLC12A4-201ENST00000316341 MTERF4Q7Z6M4 381 aaKnown RBP22.02■■□□□ 1.12
SLC12A4-201ENST00000316341 TRIM5Q9C035 493 aa22.02■■□□□ 1.12
SLC12A4-201ENST00000316341 IL1RAPL2Q9NP60 686 aa22.02■■□□□ 1.12
SLC12A4-201ENST00000316341 GDPD2Q9HCC8 539 aa22.02■■□□□ 1.12
SLC12A4-201ENST00000316341 MIS18AQ9NYP9 233 aa22.02■■□□□ 1.12
SLC12A4-201ENST00000316341 MRC2Q9UBG0 1479 aa22.02■■□□□ 1.12
SLC12A4-201ENST00000316341 FCHSD2O94868 740 aa22.01■■□□□ 1.11
SLC12A4-201ENST00000316341 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
SLC12A4-201ENST00000316341 GNAI2P04899 355 aa22.01■■□□□ 1.11
SLC12A4-201ENST00000316341 CREBRFQ8IUR6 639 aa22.01■■□□□ 1.11
SLC12A4-201ENST00000316341 CHMP4AQ9BY43 222 aa22■■□□□ 1.11
SLC12A4-201ENST00000316341 ZSCAN21Q9Y5A6 473 aaPredicted RBP22■■□□□ 1.11
SLC12A4-201ENST00000316341 TULP1O00294 542 aaPredicted RBP22■■□□□ 1.11
SLC12A4-201ENST00000316341 NFE2L2Q16236 605 aa22■■□□□ 1.11
SLC12A4-201ENST00000316341 SCAF11Q99590 1463 aaKnown RBP22■■□□□ 1.11
SLC12A4-201ENST00000316341 CSB-PGBD3P0DP91 1061 aa21.99■■□□□ 1.11
SLC12A4-201ENST00000316341 BMP2KLQ5H9B9 411 aa21.99■■□□□ 1.11
SLC12A4-201ENST00000316341 GNAI3P08754 354 aa21.99■■□□□ 1.11
SLC12A4-201ENST00000316341 NPHP1O15259 732 aa21.98■■□□□ 1.11
SLC12A4-201ENST00000316341 LRRCC1Q9C099 1032 aa21.98■■□□□ 1.11
SLC12A4-201ENST00000316341 KIF3AQ9Y496 699 aa21.98■■□□□ 1.11
SLC12A4-201ENST00000316341 CARD14Q9BXL6 1004 aa21.98■■□□□ 1.11
SLC12A4-201ENST00000316341 HMGN5P82970 282 aaKnown RBP21.97■■□□□ 1.11
SLC12A4-201ENST00000316341 NUP153P49790 1475 aaKnown RBP21.97■■□□□ 1.11
SLC12A4-201ENST00000316341 WDR33Q9C0J8 1336 aaKnown RBP21.97■■□□□ 1.11
SLC12A4-201ENST00000316341 HOMER1Q86YM7 354 aa21.96■■□□□ 1.11
SLC12A4-201ENST00000316341 CEBPZQ03701 1054 aaKnown RBP21.96■■□□□ 1.11
SLC12A4-201ENST00000316341 TXNDC2Q86VQ3 553 aa21.96■■□□□ 1.11
SLC12A4-201ENST00000316341 LARP6Q9BRS8 491 aaKnown RBP21.96■■□□□ 1.11
SLC12A4-201ENST00000316341 HDAC1Q13547 482 aaPredicted RBP21.95■■□□□ 1.11
SLC12A4-201ENST00000316341 G3BP1Q13283 466 aaKnown RBP eCLIP21.95■■□□□ 1.1
SLC12A4-201ENST00000316341 TPD52L1Q16890 204 aaPredicted RBP21.95■■□□□ 1.1
SLC12A4-201ENST00000316341 MCM10Q7L590 875 aa21.95■■□□□ 1.1
SLC12A4-201ENST00000316341 CNTROBQ8N137 903 aa21.95■■□□□ 1.1
SLC12A4-201ENST00000316341 TSHZ3Q63HK5 1081 aa21.95■■□□□ 1.1
SLC12A4-201ENST00000316341 NUCB1Q02818 461 aa21.95■■□□□ 1.1
SLC12A4-201ENST00000316341 AIMP1Q12904 312 aaKnown RBP21.95■■□□□ 1.1
SLC12A4-201ENST00000316341 RNF20Q5VTR2 975 aa21.95■■□□□ 1.1
SLC12A4-201ENST00000316341 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
SLC12A4-201ENST00000316341 ALDH1L2Q3SY69 923 aa21.94■■□□□ 1.1
SLC12A4-201ENST00000316341 KLHL40Q2TBA0 621 aa21.94■■□□□ 1.1
SLC12A4-201ENST00000316341 RPAP2Q8IXW5 612 aaPredicted RBP21.94■■□□□ 1.1
SLC12A4-201ENST00000316341 GAS2L2Q8NHY3 880 aa21.94■■□□□ 1.1
SLC12A4-201ENST00000316341 EMILIN1Q9Y6C2 1016 aa21.93■■□□□ 1.1
SLC12A4-201ENST00000316341 F6X3S4 739 aa21.93■■□□□ 1.1
SLC12A4-201ENST00000316341 DDX54Q8TDD1 881 aaKnown RBP21.93■■□□□ 1.1
SLC12A4-201ENST00000316341 ASXL1Q8IXJ9 1541 aa21.93■■□□□ 1.1
SLC12A4-201ENST00000316341 CLASRPQ8N2M8 674 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms