RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 TEX14Q8IWB6 1497 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 DCTN1Q14203 1278 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 SYNE3Q6ZMZ3 975 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 AK7Q96M32 723 aa11.1□□□□□ -0.63
CTC1-201ENST00000315684 SLKQ9H2G2 1235 aaPredicted RBP11.1□□□□□ -0.63
CTC1-201ENST00000315684 PRKRIP1Q9H875 184 aaPredicted RBP11.1□□□□□ -0.63
CTC1-201ENST00000315684 ADAMTS8Q9UP79 889 aa11.09□□□□□ -0.63
CTC1-201ENST00000315684 CCDC30Q5VVM6 783 aa11.09□□□□□ -0.63
CTC1-201ENST00000315684 MYCNP04198 464 aaPredicted RBP11.09□□□□□ -0.63
CTC1-201ENST00000315684 NBPF8Q3BBV2 869 aa11.09□□□□□ -0.63
CTC1-201ENST00000315684 ZNF622Q969S3 477 aaKnown RBP eCLIP11.09□□□□□ -0.631e-7■■■■■ 29.8
CTC1-201ENST00000315684 CRBNQ96SW2 442 aa11.09□□□□□ -0.63
CTC1-201ENST00000315684 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
CTC1-201ENST00000315684 MPHOSPH8Q99549 860 aa11.09□□□□□ -0.63
CTC1-201ENST00000315684 KIAA1107Q9UPP5 1409 aa11.08□□□□□ -0.64
CTC1-201ENST00000315684 MCTP1Q6DN14 999 aa11.08□□□□□ -0.64
CTC1-201ENST00000315684 KCNH5Q8NCM2 988 aa11.08□□□□□ -0.64
CTC1-201ENST00000315684 RRP12Q5JTH9 1297 aaKnown RBP11.08□□□□□ -0.64
CTC1-201ENST00000315684 FAM135AQ9P2D6 1515 aa11.08□□□□□ -0.64
CTC1-201ENST00000315684 MCM10Q7L590 875 aa11.07□□□□□ -0.64
CTC1-201ENST00000315684 SLC4A2P04920 1241 aa11.07□□□□□ -0.64
CTC1-201ENST00000315684 TCP11L2Q8N4U5 519 aa11.07□□□□□ -0.64
CTC1-201ENST00000315684 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
CTC1-201ENST00000315684 THUMPD2Q9BTF0 503 aaKnown RBP11.07□□□□□ -0.64
CTC1-201ENST00000315684 STARD3NLO95772 234 aa11.06□□□□□ -0.64
CTC1-201ENST00000315684 CHAF1AQ13111 956 aaPredicted RBP11.06□□□□□ -0.64
CTC1-201ENST00000315684 TTC39AQ5SRH9 613 aa11.06□□□□□ -0.64
CTC1-201ENST00000315684 H3BQV1 296 aa11.06□□□□□ -0.64
CTC1-201ENST00000315684 PES1O00541 588 aaKnown RBP11.06□□□□□ -0.64
CTC1-201ENST00000315684 GPTP24298 496 aa11.06□□□□□ -0.64
CTC1-201ENST00000315684 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
CTC1-201ENST00000315684 CNTLNQ9NXG0 1405 aa11.06□□□□□ -0.64
CTC1-201ENST00000315684 PANK1Q8TE04 598 aa11.06□□□□□ -0.64
CTC1-201ENST00000315684 RPGRIP1LQ68CZ1 1315 aa11.06□□□□□ -0.64
CTC1-201ENST00000315684 PPP2R1AP30153 589 aa11.06□□□□□ -0.64
CTC1-201ENST00000315684 MAP4K4O95819 1239 aaPredicted RBP11.05□□□□□ -0.64
CTC1-201ENST00000315684 CHMP4BP1P59074 171 aa11.05□□□□□ -0.64
CTC1-201ENST00000315684 CFAP65Q6ZU64 1925 aaKnown RBP11.05□□□□□ -0.64
CTC1-201ENST00000315684 TIAM1Q13009 1591 aa11.05□□□□□ -0.64
CTC1-201ENST00000315684 DZIP1LQ8IYY4 767 aaKnown RBP11.05□□□□□ -0.64
CTC1-201ENST00000315684 ANKIB1Q9P2G1 1089 aa11.05□□□□□ -0.64
CTC1-201ENST00000315684 KIF16BQ96L93 1317 aa11.05□□□□□ -0.64
CTC1-201ENST00000315684 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
CTC1-201ENST00000315684 FAM184AQ8NB25 1140 aa11.05□□□□□ -0.64
CTC1-201ENST00000315684 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
CTC1-201ENST00000315684 API5Q9BZZ5 524 aaKnown RBP11.05□□□□□ -0.64
CTC1-201ENST00000315684 ERICH2A1L162 156 aa11.05□□□□□ -0.64
CTC1-201ENST00000315684 SF3A1Q15459 793 aaKnown RBP11.05□□□□□ -0.64
CTC1-201ENST00000315684 NOS1P29475 1434 aa11.05□□□□□ -0.64
CTC1-201ENST00000315684 TRDNQ13061 729 aa11.05□□□□□ -0.64
CTC1-201ENST00000315684 LRPPRCP42704 1394 aaKnown RBP11.05□□□□□ -0.64
CTC1-201ENST00000315684 EXOSC9Q06265 439 aaKnown RBP11.04□□□□□ -0.64
CTC1-201ENST00000315684 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
CTC1-201ENST00000315684 GZF1Q9H116 711 aaPredicted RBP11.04□□□□□ -0.64
CTC1-201ENST00000315684 SURF6O75683 361 aaKnown RBP11.04□□□□□ -0.64
CTC1-201ENST00000315684 RFC4P35249 363 aa11.04□□□□□ -0.64
CTC1-201ENST00000315684 TWISTNBQ3B726 338 aaPredicted RBP11.04□□□□□ -0.64
CTC1-201ENST00000315684 EMILIN1Q9Y6C2 1016 aa11.04□□□□□ -0.64
CTC1-201ENST00000315684 KRI1Q8N9T8 703 aaKnown RBP11.04□□□□□ -0.64
CTC1-201ENST00000315684 EIF4G3O43432 1585 aaKnown RBP11.04□□□□□ -0.64
CTC1-201ENST00000315684 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
CTC1-201ENST00000315684 EXOC6Q8TAG9 804 aa11.04□□□□□ -0.64
CTC1-201ENST00000315684 NOC3LQ8WTT2 800 aaKnown RBP11.03□□□□□ -0.64
CTC1-201ENST00000315684 HFM1A2PYH4 1435 aa11.03□□□□□ -0.64
CTC1-201ENST00000315684 WDR7Q9Y4E6 1490 aa11.03□□□□□ -0.64
CTC1-201ENST00000315684 CCDC57Q2TAC2 916 aa11.03□□□□□ -0.64
CTC1-201ENST00000315684 CCDC7Q96M83 1385 aa11.03□□□□□ -0.64
CTC1-201ENST00000315684 GOLGA6L6A8MZA4 724 aa11.03□□□□□ -0.64
CTC1-201ENST00000315684 CCDC43Q96MW1 224 aaKnown RBP11.03□□□□□ -0.64
CTC1-201ENST00000315684 GNAT3A8MTJ3 354 aa11.03□□□□□ -0.64
CTC1-201ENST00000315684 CLEC11AQ9Y240 323 aa11.03□□□□□ -0.64
CTC1-201ENST00000315684 RPGRQ92834 1020 aaKnown RBP11.03□□□□□ -0.64
CTC1-201ENST00000315684 LNPKQ9C0E8 428 aa11.03□□□□□ -0.64
CTC1-201ENST00000315684 NSD3Q9BZ95 1437 aa11.02□□□□□ -0.64
CTC1-201ENST00000315684 ANKRD24Q8TF21 1146 aa11.02□□□□□ -0.64
CTC1-201ENST00000315684 PTPN23Q9H3S7 1636 aa11.02□□□□□ -0.64
CTC1-201ENST00000315684 ACEP12821 1306 aa11.02□□□□□ -0.65
CTC1-201ENST00000315684 FKBP4Q02790 459 aaKnown RBP eCLIP11.01□□□□□ -0.65
CTC1-201ENST00000315684 ANKRD30BQ9BXX2 1392 aa11.01□□□□□ -0.65
CTC1-201ENST00000315684 ATP10BO94823 1461 aa11.01□□□□□ -0.65
CTC1-201ENST00000315684 TBC1D2BQ9UPU7 963 aa11.01□□□□□ -0.65
CTC1-201ENST00000315684 JARID2Q92833 1246 aaPredicted RBP11.01□□□□□ -0.65
CTC1-201ENST00000315684 TFCP2L1Q9NZI6 479 aa11.01□□□□□ -0.65
CTC1-201ENST00000315684 PIP4K2AP48426 406 aaPredicted RBP11.01□□□□□ -0.65
CTC1-201ENST00000315684 CPLX1O14810 134 aa11□□□□□ -0.65
CTC1-201ENST00000315684 CDCA7LQ96GN5 454 aa11□□□□□ -0.65
CTC1-201ENST00000315684 FSD1Q9BTV5 496 aa11□□□□□ -0.65
CTC1-201ENST00000315684 RAPGEF6Q8TEU7 1601 aa11□□□□□ -0.65
CTC1-201ENST00000315684 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
CTC1-201ENST00000315684 SLC4A8Q2Y0W8 1093 aa11□□□□□ -0.65
CTC1-201ENST00000315684 ABCC5O15440 1437 aa11□□□□□ -0.65
CTC1-201ENST00000315684 ZBTB3Q9H5J0 574 aa11□□□□□ -0.65
CTC1-201ENST00000315684 BTG4Q9NY30 223 aa11□□□□□ -0.65
CTC1-201ENST00000315684 ZNF652Q9Y2D9 606 aa11□□□□□ -0.65
CTC1-201ENST00000315684 MYD88Q99836 296 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 GNL3LQ9NVN8 582 aaKnown RBP10.99□□□□□ -0.65
CTC1-201ENST00000315684 DDX19BQ9UMR2 479 aa10.99□□□□□ -0.65
CTC1-201ENST00000315684 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
CTC1-201ENST00000315684 NOB1Q9ULX3 412 aaKnown RBP10.99□□□□□ -0.65
CTC1-201ENST00000315684 C6orf229H3BNL8 230 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms