RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZNF592Q92610 1267 aa16.64■□□□□ 0.25
SPAST-201ENST00000315285 NLRP2Q9NX02 1062 aa16.64■□□□□ 0.25
SPAST-201ENST00000315285 C20orf194Q5TEA3 1177 aa16.64■□□□□ 0.25
SPAST-201ENST00000315285 RNF214Q8ND24 703 aa16.64■□□□□ 0.25
SPAST-201ENST00000315285 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
SPAST-201ENST00000315285 GOLGA6L1Q8N7Z2 621 aa16.63■□□□□ 0.25
SPAST-201ENST00000315285 FCHSD2O94868 740 aa16.63■□□□□ 0.25
SPAST-201ENST00000315285 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
SPAST-201ENST00000315285 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
SPAST-201ENST00000315285 CCDC73Q6ZRK6 1079 aa16.63■□□□□ 0.25
SPAST-201ENST00000315285 NOC3LQ8WTT2 800 aaKnown RBP16.63■□□□□ 0.25
SPAST-201ENST00000315285 ZNF428Q96B54 188 aa16.63■□□□□ 0.25
SPAST-201ENST00000315285 MSH5O43196 834 aa16.63■□□□□ 0.25
SPAST-201ENST00000315285 FSD1Q9BTV5 496 aa16.63■□□□□ 0.25
SPAST-201ENST00000315285 AMER1Q5JTC6 1135 aaPredicted RBP16.62■□□□□ 0.25
SPAST-201ENST00000315285 RTEL1-TNFRSF6BF6WH68 1400 aa16.62■□□□□ 0.25
SPAST-201ENST00000315285 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
SPAST-201ENST00000315285 PRPF40AO75400 957 aaKnown RBP16.62■□□□□ 0.25
SPAST-201ENST00000315285 PSMA5P28066 241 aa16.62■□□□□ 0.25
SPAST-201ENST00000315285 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
SPAST-201ENST00000315285 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.62■□□□□ 0.25
SPAST-201ENST00000315285 MARCH6O60337 910 aa16.61■□□□□ 0.25
SPAST-201ENST00000315285 RAPGEF3O95398 923 aa16.61■□□□□ 0.25
SPAST-201ENST00000315285 K7ELQ4 463 aaPredicted RBP16.61■□□□□ 0.25
SPAST-201ENST00000315285 HDGFL1Q5TGJ6 251 aa16.61■□□□□ 0.25
SPAST-201ENST00000315285 TPM1P09493 284 aa16.61■□□□□ 0.25
SPAST-201ENST00000315285 FOSBP53539 338 aa16.61■□□□□ 0.25
SPAST-201ENST00000315285 TSR1Q2NL82 804 aaKnown RBP16.6■□□□□ 0.25
SPAST-201ENST00000315285 G3V3G9 751 aa16.6■□□□□ 0.25
SPAST-201ENST00000315285 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
SPAST-201ENST00000315285 IL27Q8NEV9 243 aa16.6■□□□□ 0.25
SPAST-201ENST00000315285 CCAR2Q8N163 923 aaKnown RBP16.6■□□□□ 0.25
SPAST-201ENST00000315285 TMEM57Q8N5G2 664 aa16.6■□□□□ 0.25
SPAST-201ENST00000315285 CCDC39Q9UFE4 941 aa16.6■□□□□ 0.25
SPAST-201ENST00000315285 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
SPAST-201ENST00000315285 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
SPAST-201ENST00000315285 VSIG10Q8N0Z9 540 aa16.59■□□□□ 0.25
SPAST-201ENST00000315285 PLEKHO1Q53GL0 409 aaPredicted RBP16.59■□□□□ 0.25
SPAST-201ENST00000315285 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
SPAST-201ENST00000315285 RALYLQ86SE5 291 aaKnown RBP16.59■□□□□ 0.25
SPAST-201ENST00000315285 GPRASP1Q5JY77 1395 aa16.59■□□□□ 0.25
SPAST-201ENST00000315285 RARSP54136 660 aaKnown RBP16.59■□□□□ 0.25
SPAST-201ENST00000315285 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
SPAST-201ENST00000315285 KIF14Q15058 1648 aa16.59■□□□□ 0.25
SPAST-201ENST00000315285 CCDC27Q2M243 656 aa16.59■□□□□ 0.25
SPAST-201ENST00000315285 CWC22Q9HCG8 908 aaKnown RBP16.59■□□□□ 0.25
SPAST-201ENST00000315285 NKTRP30414 1462 aaKnown RBP16.58■□□□□ 0.25
SPAST-201ENST00000315285 NFE2L2Q16236 605 aa16.58■□□□□ 0.25
SPAST-201ENST00000315285 WASHC4Q2M389 1173 aa16.58■□□□□ 0.24
SPAST-201ENST00000315285 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
SPAST-201ENST00000315285 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
SPAST-201ENST00000315285 GRIN2AQ12879 1464 aa16.57■□□□□ 0.24
SPAST-201ENST00000315285 HOOK1Q9UJC3 728 aaKnown RBP16.57■□□□□ 0.24
SPAST-201ENST00000315285 ATF3P18847 181 aa16.57■□□□□ 0.24
SPAST-201ENST00000315285 FBXW7Q969H0 707 aa16.57■□□□□ 0.24
SPAST-201ENST00000315285 MCM4P33991 863 aa16.56■□□□□ 0.24
SPAST-201ENST00000315285 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
SPAST-201ENST00000315285 HIP1O00291 1037 aa16.56■□□□□ 0.24
SPAST-201ENST00000315285 PDCP20941 246 aa16.56■□□□□ 0.24
SPAST-201ENST00000315285 IFT57Q9NWB7 429 aa16.56■□□□□ 0.24
SPAST-201ENST00000315285 HOMER1Q86YM7 354 aa16.56■□□□□ 0.24
SPAST-201ENST00000315285 CIZ1Q9ULV3 898 aaPredicted RBP16.56■□□□□ 0.24
SPAST-201ENST00000315285 TNNT3P45378 269 aaPredicted RBP16.55■□□□□ 0.24
SPAST-201ENST00000315285 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
SPAST-201ENST00000315285 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
SPAST-201ENST00000315285 DUSP27Q5VZP5 1158 aa16.55■□□□□ 0.24
SPAST-201ENST00000315285 LETM1O95202 739 aaPredicted RBP16.55■□□□□ 0.24
SPAST-201ENST00000315285 ESCO1Q5FWF5 840 aa16.55■□□□□ 0.24
SPAST-201ENST00000315285 SSH1Q8WYL5 1049 aa16.55■□□□□ 0.24
SPAST-201ENST00000315285 FIBPO43427 364 aa16.55■□□□□ 0.24
SPAST-201ENST00000315285 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
SPAST-201ENST00000315285 RPAP2Q8IXW5 612 aaPredicted RBP16.55■□□□□ 0.24
SPAST-201ENST00000315285 TSPY26PQ9H489 355 aa16.55■□□□□ 0.24
SPAST-201ENST00000315285 ERICH2A1L162 156 aa16.54■□□□□ 0.24
SPAST-201ENST00000315285 PTPRKQ15262 1439 aa16.54■□□□□ 0.24
SPAST-201ENST00000315285 VPS37DQ86XT2 251 aa16.54■□□□□ 0.24
SPAST-201ENST00000315285 SAFBQ15424 915 aaKnown RBP eCLIP16.54■□□□□ 0.24
SPAST-201ENST00000315285 LRPPRCP42704 1394 aaKnown RBP16.54■□□□□ 0.24
SPAST-201ENST00000315285 TPM2P07951 284 aa16.54■□□□□ 0.24
SPAST-201ENST00000315285 VPS53Q5VIR6 699 aa16.53■□□□□ 0.24
SPAST-201ENST00000315285 SDF4Q9BRK5 362 aa16.53■□□□□ 0.24
SPAST-201ENST00000315285 A0A0U1RQG5 324 aaPredicted RBP16.53■□□□□ 0.24
SPAST-201ENST00000315285 AMOTL1Q8IY63 956 aa16.53■□□□□ 0.24
SPAST-201ENST00000315285 DNAJC2Q99543 621 aaKnown RBP16.53■□□□□ 0.24
SPAST-201ENST00000315285 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
SPAST-201ENST00000315285 ANKRD20A12PQ8NF67 263 aa16.53■□□□□ 0.24
SPAST-201ENST00000315285 ADGRF5Q8IZF2 1346 aa16.53■□□□□ 0.24
SPAST-201ENST00000315285 URB2Q14146 1524 aaKnown RBP16.53■□□□□ 0.24
SPAST-201ENST00000315285 GRPEL1Q9HAV7 217 aa16.53■□□□□ 0.24
SPAST-201ENST00000315285 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.24
SPAST-201ENST00000315285 CCDC61Q9Y6R9 512 aa16.52■□□□□ 0.24
SPAST-201ENST00000315285 ABCC11Q96J66 1382 aa16.52■□□□□ 0.24
SPAST-201ENST00000315285 DISP3Q9P2K9 1392 aa16.51■□□□□ 0.23
SPAST-201ENST00000315285 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
SPAST-201ENST00000315285 NAT10Q9H0A0 1025 aaKnown RBP16.51■□□□□ 0.23
SPAST-201ENST00000315285 CYP46A1Q9Y6A2 500 aa16.51■□□□□ 0.23
SPAST-201ENST00000315285 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
SPAST-201ENST00000315285 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
SPAST-201ENST00000315285 SCAF11Q99590 1463 aaKnown RBP16.5■□□□□ 0.23
SPAST-201ENST00000315285 IPO7O95373 1038 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms