RNA–Protein interactions for RNA: ENST00000314867.9

SLIT1-202, Transcript of slit guidance ligand 1, humanhuman

TSL 5

Gene SLIT1, Length 2,345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT1-202ENST00000314867 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.43
SLIT1-202ENST00000314867 AAMPQ13685 434 aa17.71■□□□□ 0.43
SLIT1-202ENST00000314867 UBR1Q8IWV7 1749 aa17.7■□□□□ 0.42
SLIT1-202ENST00000314867 STK26Q9P289 416 aa17.7■□□□□ 0.42
SLIT1-202ENST00000314867 MYH16Q9H6N6 1097 aa17.69■□□□□ 0.42
SLIT1-202ENST00000314867 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
SLIT1-202ENST00000314867 SETD1BQ9UPS6 1966 aaKnown RBP17.69■□□□□ 0.42
SLIT1-202ENST00000314867 ANKRD26Q9UPS8 1709 aa17.69■□□□□ 0.42
SLIT1-202ENST00000314867 RLBP1P12271 317 aa17.69■□□□□ 0.42
SLIT1-202ENST00000314867 TXNDC2Q86VQ3 553 aa17.69■□□□□ 0.42
SLIT1-202ENST00000314867 EID1Q9Y6B2 187 aa17.69■□□□□ 0.42
SLIT1-202ENST00000314867 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
SLIT1-202ENST00000314867 ATAD2Q6PL18 1390 aa17.68■□□□□ 0.42
SLIT1-202ENST00000314867 SRPK2P78362 688 aaKnown RBP17.68■□□□□ 0.42
SLIT1-202ENST00000314867 TNNQ9UQP3 1299 aa17.68■□□□□ 0.42
SLIT1-202ENST00000314867 MED14O60244 1454 aa17.68■□□□□ 0.42
SLIT1-202ENST00000314867 CD163L1Q9NR16 1453 aa17.68■□□□□ 0.42
SLIT1-202ENST00000314867 YTHDC2Q9H6S0 1430 aaKnown RBP17.67■□□□□ 0.42
SLIT1-202ENST00000314867 LTKP29376 864 aa17.67■□□□□ 0.42
SLIT1-202ENST00000314867 SLC4A3P48751 1232 aa17.67■□□□□ 0.42
SLIT1-202ENST00000314867 PMFBP1Q8TBY8 1022 aa17.66■□□□□ 0.42
SLIT1-202ENST00000314867 PLEKHF1Q96S99 279 aa17.66■□□□□ 0.42
SLIT1-202ENST00000314867 BCL2L13Q9BXK5 485 aa17.66■□□□□ 0.42
SLIT1-202ENST00000314867 GGNBP2Q9H3C7 697 aa17.66■□□□□ 0.42
SLIT1-202ENST00000314867 PRAM1Q96QH2 718 aa17.65■□□□□ 0.42
SLIT1-202ENST00000314867 PCDHB15Q9Y5E8 787 aa17.65■□□□□ 0.42
SLIT1-202ENST00000314867 MINK1Q8N4C8 1332 aaPredicted RBP17.65■□□□□ 0.42
SLIT1-202ENST00000314867 FYB1O15117 783 aa17.64■□□□□ 0.41
SLIT1-202ENST00000314867 TERF2IPQ9NYB0 399 aa17.64■□□□□ 0.41
SLIT1-202ENST00000314867 ALKQ9UM73 1620 aa17.64■□□□□ 0.41
SLIT1-202ENST00000314867 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
SLIT1-202ENST00000314867 USP19O94966 1318 aa17.64■□□□□ 0.41
SLIT1-202ENST00000314867 CT47B1P0C2W7 299 aaPredicted RBP17.63■□□□□ 0.41
SLIT1-202ENST00000314867 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
SLIT1-202ENST00000314867 POGKQ9P215 609 aa17.62■□□□□ 0.41
SLIT1-202ENST00000314867 CEP170BQ9Y4F5 1589 aaPredicted RBP17.62■□□□□ 0.41
SLIT1-202ENST00000314867 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
SLIT1-202ENST00000314867 TRIM35Q9UPQ4 493 aa17.61■□□□□ 0.41
SLIT1-202ENST00000314867 KDM4FA0A1W2PPD8 638 aa17.6■□□□□ 0.41
SLIT1-202ENST00000314867 MVPQ14764 893 aaKnown RBP17.6■□□□□ 0.41
SLIT1-202ENST00000314867 NFKBIBQ15653 356 aa17.6■□□□□ 0.41
SLIT1-202ENST00000314867 ZKSCAN2Q63HK3 967 aa17.6■□□□□ 0.41
SLIT1-202ENST00000314867 TSR2Q969E8 191 aaKnown RBP17.6■□□□□ 0.41
SLIT1-202ENST00000314867 SLIT1O75093 1534 aa17.6■□□□□ 0.41
SLIT1-202ENST00000314867 ARHGAP23Q9P227 1491 aa17.6■□□□□ 0.41
SLIT1-202ENST00000314867 PNPLA6Q8IY17 1366 aa17.59■□□□□ 0.41
SLIT1-202ENST00000314867 KIF20BQ96Q89 1820 aa17.59■□□□□ 0.41
SLIT1-202ENST00000314867 PLEKHG1Q9ULL1 1385 aa17.58■□□□□ 0.41
SLIT1-202ENST00000314867 IL16Q14005 1332 aa17.58■□□□□ 0.41
SLIT1-202ENST00000314867 SEC24BO95487 1268 aa17.58■□□□□ 0.41
SLIT1-202ENST00000314867 ANKLE2Q86XL3 938 aa17.58■□□□□ 0.41
SLIT1-202ENST00000314867 CDK19Q9BWU1 502 aa17.58■□□□□ 0.41
SLIT1-202ENST00000314867 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
SLIT1-202ENST00000314867 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.4
SLIT1-202ENST00000314867 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
SLIT1-202ENST00000314867 PDZRN3Q9UPQ7 1066 aa17.58■□□□□ 0.4
SLIT1-202ENST00000314867 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
SLIT1-202ENST00000314867 SLC26A8Q96RN1 970 aa17.57■□□□□ 0.4
SLIT1-202ENST00000314867 DLC1Q96QB1 1528 aa17.56■□□□□ 0.4
SLIT1-202ENST00000314867 METP08581 1390 aa17.56■□□□□ 0.4
SLIT1-202ENST00000314867 CDC42BPGQ6DT37 1551 aa17.56■□□□□ 0.4
SLIT1-202ENST00000314867 DIAPH1O60610 1272 aaKnown RBP17.55■□□□□ 0.4
SLIT1-202ENST00000314867 CABP1Q9NZU7 370 aa17.55■□□□□ 0.4
SLIT1-202ENST00000314867 FTSJ3Q8IY81 847 aaKnown RBP17.55■□□□□ 0.4
SLIT1-202ENST00000314867 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
SLIT1-202ENST00000314867 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
SLIT1-202ENST00000314867 SSH1Q8WYL5 1049 aa17.54■□□□□ 0.4
SLIT1-202ENST00000314867 SETD1AO15047 1707 aaKnown RBP17.53■□□□□ 0.4
SLIT1-202ENST00000314867 RIPK4P57078 832 aa17.53■□□□□ 0.4
SLIT1-202ENST00000314867 ADAMTS13Q76LX8 1427 aa17.53■□□□□ 0.4
SLIT1-202ENST00000314867 ZNF142P52746 1687 aaPredicted RBP17.53■□□□□ 0.4
SLIT1-202ENST00000314867 TRIM27P14373 513 aa17.53■□□□□ 0.4
SLIT1-202ENST00000314867 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
SLIT1-202ENST00000314867 TBX22Q9Y458 520 aa17.53■□□□□ 0.4
SLIT1-202ENST00000314867 ATP7BP35670 1465 aa17.52■□□□□ 0.4
SLIT1-202ENST00000314867 LRRC7Q96NW7 1537 aa17.51■□□□□ 0.39
SLIT1-202ENST00000314867 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
SLIT1-202ENST00000314867 FCHSD2O94868 740 aa17.5■□□□□ 0.39
SLIT1-202ENST00000314867 WAPLQ7Z5K2 1190 aa17.5■□□□□ 0.39
SLIT1-202ENST00000314867 DDX19BQ9UMR2 479 aa17.49■□□□□ 0.39
SLIT1-202ENST00000314867 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
SLIT1-202ENST00000314867 HDAC1Q13547 482 aaPredicted RBP17.49■□□□□ 0.39
SLIT1-202ENST00000314867 NOB1Q9ULX3 412 aaKnown RBP17.49■□□□□ 0.39
SLIT1-202ENST00000314867 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
SLIT1-202ENST00000314867 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
SLIT1-202ENST00000314867 GSE1Q14687 1217 aa17.48■□□□□ 0.39
SLIT1-202ENST00000314867 TBC1D32Q96NH3 1257 aa17.47■□□□□ 0.39
SLIT1-202ENST00000314867 BECN1Q14457 450 aa17.47■□□□□ 0.39
SLIT1-202ENST00000314867 ITPRIPQ8IWB1 547 aa17.47■□□□□ 0.39
SLIT1-202ENST00000314867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
SLIT1-202ENST00000314867 KIF16BQ96L93 1317 aa17.46■□□□□ 0.39
SLIT1-202ENST00000314867 AMOTL2Q9Y2J4 779 aa17.46■□□□□ 0.39
SLIT1-202ENST00000314867 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.38
SLIT1-202ENST00000314867 FRAT2O75474 233 aaPredicted RBP17.46■□□□□ 0.38
SLIT1-202ENST00000314867 PRKAR2BP31323 418 aa17.46■□□□□ 0.38
SLIT1-202ENST00000314867 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.38
SLIT1-202ENST00000314867 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.38
SLIT1-202ENST00000314867 SIRT1Q96EB6 747 aa17.46■□□□□ 0.38
SLIT1-202ENST00000314867 UPF2Q9HAU5 1272 aaKnown RBP17.46■□□□□ 0.38
SLIT1-202ENST00000314867 MAP2P11137 1827 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms