RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 TMEM57Q8N5G2 664 aa16.78■□□□□ 0.28
ZNF541-202ENST00000314121 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
ZNF541-202ENST00000314121 LETM1O95202 739 aaPredicted RBP16.78■□□□□ 0.28
ZNF541-202ENST00000314121 TNNT3P45378 269 aaPredicted RBP16.78■□□□□ 0.28
ZNF541-202ENST00000314121 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
ZNF541-202ENST00000314121 TPM3P06753 285 aa16.77■□□□□ 0.28
ZNF541-202ENST00000314121 TTC5Q8N0Z6 440 aa16.77■□□□□ 0.27
ZNF541-202ENST00000314121 GOLGA6L1Q8N7Z2 621 aa16.77■□□□□ 0.27
ZNF541-202ENST00000314121 CPLX1O14810 134 aa16.76■□□□□ 0.27
ZNF541-202ENST00000314121 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
ZNF541-202ENST00000314121 TSPY26PQ9H489 355 aa16.76■□□□□ 0.27
ZNF541-202ENST00000314121 ATAD2Q6PL18 1390 aa16.76■□□□□ 0.27
ZNF541-202ENST00000314121 CCDC73Q6ZRK6 1079 aa16.76■□□□□ 0.27
ZNF541-202ENST00000314121 RASSF8Q8NHQ8 419 aa16.76■□□□□ 0.27
ZNF541-202ENST00000314121 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
ZNF541-202ENST00000314121 PDCP20941 246 aa16.75■□□□□ 0.27
ZNF541-202ENST00000314121 PSMA5P28066 241 aa16.75■□□□□ 0.27
ZNF541-202ENST00000314121 CCT4P50991 539 aaKnown RBP16.75■□□□□ 0.27
ZNF541-202ENST00000314121 RPAP2Q8IXW5 612 aaPredicted RBP16.75■□□□□ 0.27
ZNF541-202ENST00000314121 SSH1Q8WYL5 1049 aa16.75■□□□□ 0.27
ZNF541-202ENST00000314121 IFT57Q9NWB7 429 aa16.75■□□□□ 0.27
ZNF541-202ENST00000314121 SULT6B1Q6IMI4 303 aa16.74■□□□□ 0.27
ZNF541-202ENST00000314121 PLB1Q6P1J6 1458 aa16.74■□□□□ 0.27
ZNF541-202ENST00000314121 NLRP6P59044 892 aa16.74■□□□□ 0.27
ZNF541-202ENST00000314121 HMGN5P82970 282 aaKnown RBP16.74■□□□□ 0.27
ZNF541-202ENST00000314121 CREBRFQ8IUR6 639 aa16.74■□□□□ 0.27
ZNF541-202ENST00000314121 TBC1D2Q9BYX2 928 aa16.74■□□□□ 0.27
ZNF541-202ENST00000314121 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
ZNF541-202ENST00000314121 SYNE3Q6ZMZ3 975 aa16.73■□□□□ 0.27
ZNF541-202ENST00000314121 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
ZNF541-202ENST00000314121 ABCC11Q96J66 1382 aa16.72■□□□□ 0.27
ZNF541-202ENST00000314121 NFE2L2Q16236 605 aa16.72■□□□□ 0.27
ZNF541-202ENST00000314121 LRRCC1Q9C099 1032 aa16.72■□□□□ 0.27
ZNF541-202ENST00000314121 WDR33Q9C0J8 1336 aaKnown RBP16.71■□□□□ 0.27
ZNF541-202ENST00000314121 TRIM29Q14134 588 aa16.71■□□□□ 0.27
ZNF541-202ENST00000314121 HOMER1Q86YM7 354 aa16.71■□□□□ 0.27
ZNF541-202ENST00000314121 AKAP17AQ02040 695 aaKnown RBP16.71■□□□□ 0.27
ZNF541-202ENST00000314121 PSME1Q06323 249 aa16.71■□□□□ 0.27
ZNF541-202ENST00000314121 TRDNQ13061 729 aa16.71■□□□□ 0.27
ZNF541-202ENST00000314121 ALDH1L2Q3SY69 923 aa16.71■□□□□ 0.27
ZNF541-202ENST00000314121 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
ZNF541-202ENST00000314121 FIBPO43427 364 aa16.71■□□□□ 0.26
ZNF541-202ENST00000314121 TPM1P09493 284 aa16.71■□□□□ 0.26
ZNF541-202ENST00000314121 TPD52L1Q16890 204 aaPredicted RBP16.71■□□□□ 0.26
ZNF541-202ENST00000314121 CCDC27Q2M243 656 aa16.7■□□□□ 0.26
ZNF541-202ENST00000314121 ZNF771Q7L3S4 317 aaPredicted RBP16.7■□□□□ 0.26
ZNF541-202ENST00000314121 CCAR2Q8N163 923 aaKnown RBP16.7■□□□□ 0.26
ZNF541-202ENST00000314121 RIC3Q7Z5B4 369 aa16.69■□□□□ 0.26
ZNF541-202ENST00000314121 SRCIN1Q9C0H9 1055 aa16.69■□□□□ 0.26
ZNF541-202ENST00000314121 DISP3Q9P2K9 1392 aa16.69■□□□□ 0.26
ZNF541-202ENST00000314121 FSD1Q9BTV5 496 aa16.69■□□□□ 0.26
ZNF541-202ENST00000314121 TSR1Q2NL82 804 aaKnown RBP16.69■□□□□ 0.26
ZNF541-202ENST00000314121 HIP1O00291 1037 aa16.68■□□□□ 0.26
ZNF541-202ENST00000314121 SDF4Q9BRK5 362 aa16.68■□□□□ 0.26
ZNF541-202ENST00000314121 TRIM5Q9C035 493 aa16.68■□□□□ 0.26
ZNF541-202ENST00000314121 GPS2Q13227 327 aa16.68■□□□□ 0.26
ZNF541-202ENST00000314121 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
ZNF541-202ENST00000314121 IGHDP01880 384 aa16.68■□□□□ 0.26
ZNF541-202ENST00000314121 HOOK1Q9UJC3 728 aaKnown RBP16.67■□□□□ 0.26
ZNF541-202ENST00000314121 AIMP1Q12904 312 aaKnown RBP16.67■□□□□ 0.26
ZNF541-202ENST00000314121 ZSCAN30Q86W11 494 aa16.67■□□□□ 0.26
ZNF541-202ENST00000314121 TBC1D32Q96NH3 1257 aa16.67■□□□□ 0.26
ZNF541-202ENST00000314121 RALGAPBQ86X10 1494 aa16.67■□□□□ 0.26
ZNF541-202ENST00000314121 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
ZNF541-202ENST00000314121 UGGT2Q9NYU1 1516 aa16.67■□□□□ 0.26
ZNF541-202ENST00000314121 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
ZNF541-202ENST00000314121 A0A0U1RQG5 324 aaPredicted RBP16.66■□□□□ 0.26
ZNF541-202ENST00000314121 APPP05067 770 aa16.66■□□□□ 0.26
ZNF541-202ENST00000314121 TXNDC2Q86VQ3 553 aa16.66■□□□□ 0.26
ZNF541-202ENST00000314121 NAT10Q9H0A0 1025 aaKnown RBP16.66■□□□□ 0.26
ZNF541-202ENST00000314121 LAMC3Q9Y6N6 1575 aa16.66■□□□□ 0.26
ZNF541-202ENST00000314121 PES1O00541 588 aaKnown RBP16.66■□□□□ 0.26
ZNF541-202ENST00000314121 TRIM27P14373 513 aa16.66■□□□□ 0.26
ZNF541-202ENST00000314121 FAM69CQ0P6D2 419 aa16.66■□□□□ 0.26
ZNF541-202ENST00000314121 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
ZNF541-202ENST00000314121 ERC1Q8IUD2 1116 aa16.66■□□□□ 0.26
ZNF541-202ENST00000314121 RAPGEF4Q8WZA2 1011 aa16.66■□□□□ 0.26
ZNF541-202ENST00000314121 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.66■□□□□ 0.26
ZNF541-202ENST00000314121 RTEL1-TNFRSF6BF6WH68 1400 aa16.65■□□□□ 0.26
ZNF541-202ENST00000314121 RALYLQ86SE5 291 aaKnown RBP16.65■□□□□ 0.26
ZNF541-202ENST00000314121 CYP46A1Q9Y6A2 500 aa16.65■□□□□ 0.26
ZNF541-202ENST00000314121 NEUROD6Q96NK8 337 aa16.65■□□□□ 0.26
ZNF541-202ENST00000314121 NUTM2GQ5VZR2 741 aa16.64■□□□□ 0.25
ZNF541-202ENST00000314121 AEBP1Q8IUX7 1158 aa16.64■□□□□ 0.25
ZNF541-202ENST00000314121 RRP9O43818 475 aaKnown RBP16.64■□□□□ 0.25
ZNF541-202ENST00000314121 ADGRF5Q8IZF2 1346 aa16.64■□□□□ 0.25
ZNF541-202ENST00000314121 CCDC192P0DO97 292 aa16.64■□□□□ 0.25
ZNF541-202ENST00000314121 NOC3LQ8WTT2 800 aaKnown RBP16.64■□□□□ 0.25
ZNF541-202ENST00000314121 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
ZNF541-202ENST00000314121 GPATCH8Q9UKJ3 1502 aaKnown RBP16.64■□□□□ 0.25
ZNF541-202ENST00000314121 KINO60870 393 aaKnown RBP16.63■□□□□ 0.25
ZNF541-202ENST00000314121 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
ZNF541-202ENST00000314121 KIF14Q15058 1648 aa16.63■□□□□ 0.25
ZNF541-202ENST00000314121 GRIN2AQ12879 1464 aa16.62■□□□□ 0.25
ZNF541-202ENST00000314121 FOSBP53539 338 aa16.62■□□□□ 0.25
ZNF541-202ENST00000314121 RBM10P98175 930 aaKnown RBP16.62■□□□□ 0.25
ZNF541-202ENST00000314121 TEX35Q5T0J7 233 aa16.62■□□□□ 0.25
ZNF541-202ENST00000314121 ARGLU1Q9NWB6 273 aaPredicted RBP16.62■□□□□ 0.25
ZNF541-202ENST00000314121 KRT85P78386 507 aa16.62■□□□□ 0.25
ZNF541-202ENST00000314121 FBXW7Q969H0 707 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms