RNA–Protein interactions for RNA: ENST00000311925.6

CCL19-201, Transcript of C-C motif chemokine ligand 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL19, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19-201ENST00000311925 DDX17Q92841 729 aaKnown RBP19.27■□□□□ 0.68
CCL19-201ENST00000311925 CABP1Q9NZU7 370 aa19.27■□□□□ 0.68
CCL19-201ENST00000311925 A0A1W2PP64 1363 aa19.27■□□□□ 0.68
CCL19-201ENST00000311925 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.68
CCL19-201ENST00000311925 PPIP5K1Q6PFW1 1433 aa19.26■□□□□ 0.67
CCL19-201ENST00000311925 CNGB1Q14028 1251 aaPredicted RBP19.26■□□□□ 0.67
CCL19-201ENST00000311925 YTHDC1Q96MU7 727 aaKnown RBP19.26■□□□□ 0.67
CCL19-201ENST00000311925 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
CCL19-201ENST00000311925 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
CCL19-201ENST00000311925 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
CCL19-201ENST00000311925 ANKARQ7Z5J8 1434 aa19.25■□□□□ 0.67
CCL19-201ENST00000311925 CPSF1Q10570 1443 aaKnown RBP19.24■□□□□ 0.67
CCL19-201ENST00000311925 TOPAZ1Q8N9V7 1692 aa19.24■□□□□ 0.67
CCL19-201ENST00000311925 PLEKHG3A1L390 1219 aa19.23■□□□□ 0.67
CCL19-201ENST00000311925 ZNF772Q68DY9 489 aaPredicted RBP19.22■□□□□ 0.67
CCL19-201ENST00000311925 FMN2Q9NZ56 1722 aa19.2■□□□□ 0.66
CCL19-201ENST00000311925 EDC4Q6P2E9 1401 aaKnown RBP19.2■□□□□ 0.66
CCL19-201ENST00000311925 AKAP12Q02952 1782 aa19.2■□□□□ 0.66
CCL19-201ENST00000311925 PPP2R1AP30153 589 aa19.2■□□□□ 0.66
CCL19-201ENST00000311925 CCDC184Q52MB2 194 aa19.2■□□□□ 0.66
CCL19-201ENST00000311925 MORC1Q86VD1 984 aa19.2■□□□□ 0.66
CCL19-201ENST00000311925 PXDNQ92626 1479 aa19.2■□□□□ 0.66
CCL19-201ENST00000311925 NPHP3Q7Z494 1330 aa19.2■□□□□ 0.66
CCL19-201ENST00000311925 PRR36Q9H6K5 1346 aa19.2■□□□□ 0.66
CCL19-201ENST00000311925 ESCO1Q5FWF5 840 aa19.19■□□□□ 0.66
CCL19-201ENST00000311925 MEX3CQ5U5Q3 659 aaKnown RBP19.19■□□□□ 0.66
CCL19-201ENST00000311925 MON2Q7Z3U7 1717 aa19.19■□□□□ 0.66
CCL19-201ENST00000311925 ANKRD26Q9UPS8 1709 aa19.19■□□□□ 0.66
CCL19-201ENST00000311925 COL22A1Q8NFW1 1626 aaPredicted RBP19.18■□□□□ 0.66
CCL19-201ENST00000311925 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
CCL19-201ENST00000311925 KIF20BQ96Q89 1820 aa19.17■□□□□ 0.66
CCL19-201ENST00000311925 NUTM2BA6NNL0 878 aaPredicted RBP19.17■□□□□ 0.66
CCL19-201ENST00000311925 NUTM2EB1AL46 878 aaPredicted RBP19.17■□□□□ 0.66
CCL19-201ENST00000311925 NUTM2AQ8IVF1 878 aaPredicted RBP19.17■□□□□ 0.66
CCL19-201ENST00000311925 INSRP06213 1382 aa19.17■□□□□ 0.66
CCL19-201ENST00000311925 FAM9BQ8IZU0 186 aa19.16■□□□□ 0.66
CCL19-201ENST00000311925 FYB1O15117 783 aa19.14■□□□□ 0.65
CCL19-201ENST00000311925 FOXO3O43524 673 aa19.14■□□□□ 0.65
CCL19-201ENST00000311925 AFF2P51816 1311 aa19.14■□□□□ 0.65
CCL19-201ENST00000311925 POLR3AO14802 1390 aaPredicted RBP19.14■□□□□ 0.65
CCL19-201ENST00000311925 KIF1AQ12756 1690 aa19.14■□□□□ 0.65
CCL19-201ENST00000311925 ACEP12821 1306 aa19.13■□□□□ 0.65
CCL19-201ENST00000311925 CDK12Q9NYV4 1490 aaPredicted RBP19.12■□□□□ 0.65
CCL19-201ENST00000311925 NUTM2FA1L443 756 aa19.11■□□□□ 0.65
CCL19-201ENST00000311925 USP6P35125 1406 aa19.1■□□□□ 0.65
CCL19-201ENST00000311925 TTC21AQ8NDW8 1320 aa19.1■□□□□ 0.65
CCL19-201ENST00000311925 NGDNQ8NEJ9 315 aaKnown RBP19.1■□□□□ 0.65
CCL19-201ENST00000311925 RGPD8O14715 1765 aaPredicted RBP19.09■□□□□ 0.65
CCL19-201ENST00000311925 RXRBP28702 533 aa19.09■□□□□ 0.65
CCL19-201ENST00000311925 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
CCL19-201ENST00000311925 CFAP53Q96M91 514 aa19.09■□□□□ 0.65
CCL19-201ENST00000311925 C8orf37Q96NL8 207 aa19.09■□□□□ 0.65
CCL19-201ENST00000311925 GGNBP2Q9H3C7 697 aa19.09■□□□□ 0.65
CCL19-201ENST00000311925 NRKQ7Z2Y5 1582 aa19.09■□□□□ 0.65
CCL19-201ENST00000311925 SPATA31A3Q5VYP0 1347 aa19.08■□□□□ 0.65
CCL19-201ENST00000311925 HNRNPUQ00839 825 aaKnown RBP eCLIP19.08■□□□□ 0.64
CCL19-201ENST00000311925 PHF8Q9UPP1 1060 aa19.08■□□□□ 0.64
CCL19-201ENST00000311925 TTC21BQ7Z4L5 1316 aa19.07■□□□□ 0.64
CCL19-201ENST00000311925 WDR43Q15061 677 aaKnown RBP eCLIP19.07■□□□□ 0.64
CCL19-201ENST00000311925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.07■□□□□ 0.64
CCL19-201ENST00000311925 ADAMTS2O95450 1211 aa19.06■□□□□ 0.64
CCL19-201ENST00000311925 XPCQ01831 940 aaPredicted RBP19.06■□□□□ 0.64
CCL19-201ENST00000311925 KRT28Q7Z3Y7 464 aa19.06■□□□□ 0.64
CCL19-201ENST00000311925 COG3Q96JB2 828 aa19.06■□□□□ 0.64
CCL19-201ENST00000311925 SSH2Q76I76 1423 aa19.06■□□□□ 0.64
CCL19-201ENST00000311925 PMFBP1Q8TBY8 1022 aa19.05■□□□□ 0.64
CCL19-201ENST00000311925 NGLY1Q96IV0 654 aa19.05■□□□□ 0.64
CCL19-201ENST00000311925 QTRT2Q9H974 415 aaKnown RBP19.05■□□□□ 0.64
CCL19-201ENST00000311925 SBNO1A3KN83 1393 aa19.05■□□□□ 0.64
CCL19-201ENST00000311925 RBM6P78332 1123 aaKnown RBP19.04■□□□□ 0.64
CCL19-201ENST00000311925 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
CCL19-201ENST00000311925 ZBED9Q6R2W3 1325 aa19.02■□□□□ 0.64
CCL19-201ENST00000311925 TNS3Q68CZ2 1445 aa19.02■□□□□ 0.64
CCL19-201ENST00000311925 TNNT2P45379 298 aaPredicted RBP19.02■□□□□ 0.64
CCL19-201ENST00000311925 MTHFSP49914 203 aa19.02■□□□□ 0.64
CCL19-201ENST00000311925 PSME1Q06323 249 aa19.02■□□□□ 0.64
CCL19-201ENST00000311925 MARF1Q9Y4F3 1742 aaKnown RBP19.02■□□□□ 0.63
CCL19-201ENST00000311925 NME9Q86XW9 330 aa19.01■□□□□ 0.63
CCL19-201ENST00000311925 USP21Q9UK80 565 aa19.01■□□□□ 0.63
CCL19-201ENST00000311925 USP31Q70CQ4 1352 aa19.01■□□□□ 0.63
CCL19-201ENST00000311925 BCL9LQ86UU0 1499 aa19.01■□□□□ 0.63
CCL19-201ENST00000311925 ATRNO75882 1429 aa19■□□□□ 0.63
CCL19-201ENST00000311925 BLMP54132 1417 aaPredicted RBP19■□□□□ 0.63
CCL19-201ENST00000311925 EP400Q96L91 3159 aa19■□□□□ 0.63
CCL19-201ENST00000311925 RGS12O14924 1447 aa19■□□□□ 0.63
CCL19-201ENST00000311925 TRPC5Q9UL62 973 aaPredicted RBP18.99■□□□□ 0.63
CCL19-201ENST00000311925 OVOS2A0A0J9YW53 1432 aa18.99■□□□□ 0.63
CCL19-201ENST00000311925 OVOS2Q6IE36 1432 aa18.99■□□□□ 0.63
CCL19-201ENST00000311925 USP54Q70EL1 1684 aa18.98■□□□□ 0.63
CCL19-201ENST00000311925 ARHGEF10O15013 1369 aa18.97■□□□□ 0.63
CCL19-201ENST00000311925 SLIT2O94813 1529 aa18.97■□□□□ 0.63
CCL19-201ENST00000311925 UPF1Q92900 1129 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCL19-201ENST00000311925 ADAMTS8Q9UP79 889 aa18.97■□□□□ 0.63
CCL19-201ENST00000311925 NUDCQ9Y266 331 aa18.97■□□□□ 0.63
CCL19-201ENST00000311925 SMG6Q86US8 1419 aaKnown RBP18.97■□□□□ 0.63
CCL19-201ENST00000311925 TRPM3Q9HCF6 1732 aaPredicted RBP18.97■□□□□ 0.63
CCL19-201ENST00000311925 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
CCL19-201ENST00000311925 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.95■□□□□ 0.62
CCL19-201ENST00000311925 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
CCL19-201ENST00000311925 MAP2P11137 1827 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms