RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 AAMPQ13685 434 aa19.57■□□□□ 0.72
SPIRE1-201ENST00000309836 TRIM35Q9UPQ4 493 aa19.57■□□□□ 0.72
SPIRE1-201ENST00000309836 SPATA31D1Q6ZQQ2 1576 aa19.57■□□□□ 0.72
SPIRE1-201ENST00000309836 RIMBP3CA6NJZ7 1639 aa19.56■□□□□ 0.72
SPIRE1-201ENST00000309836 RIMBP3BA6NNM3 1639 aa19.56■□□□□ 0.72
SPIRE1-201ENST00000309836 RIMBP3Q9UFD9 1639 aa19.56■□□□□ 0.72
SPIRE1-201ENST00000309836 TSPOAP1O95153 1857 aa19.56■□□□□ 0.72
SPIRE1-201ENST00000309836 PPM1GO15355 546 aaPredicted RBP19.56■□□□□ 0.72
SPIRE1-201ENST00000309836 TSR2Q969E8 191 aaKnown RBP19.56■□□□□ 0.72
SPIRE1-201ENST00000309836 MAPK8IP3Q9UPT6 1336 aa19.56■□□□□ 0.72
SPIRE1-201ENST00000309836 SLC4A3P48751 1232 aa19.56■□□□□ 0.72
SPIRE1-201ENST00000309836 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
SPIRE1-201ENST00000309836 PNPLA6Q8IY17 1366 aa19.55■□□□□ 0.72
SPIRE1-201ENST00000309836 NEFMP07197 916 aa19.54■□□□□ 0.72
SPIRE1-201ENST00000309836 PMFBP1Q8TBY8 1022 aa19.54■□□□□ 0.72
SPIRE1-201ENST00000309836 CABP1Q9NZU7 370 aa19.54■□□□□ 0.72
SPIRE1-201ENST00000309836 CDC42BPGQ6DT37 1551 aa19.54■□□□□ 0.72
SPIRE1-201ENST00000309836 STAG3Q9UJ98 1225 aa19.54■□□□□ 0.72
SPIRE1-201ENST00000309836 RIMS2Q9UQ26 1411 aa19.54■□□□□ 0.72
SPIRE1-201ENST00000309836 CT47B1P0C2W7 299 aaPredicted RBP19.53■□□□□ 0.72
SPIRE1-201ENST00000309836 USP19O94966 1318 aa19.53■□□□□ 0.72
SPIRE1-201ENST00000309836 EXOSC9Q06265 439 aaKnown RBP19.52■□□□□ 0.72
SPIRE1-201ENST00000309836 PPP6R1Q9UPN7 881 aa19.52■□□□□ 0.72
SPIRE1-201ENST00000309836 USP35Q9P2H5 1018 aa19.52■□□□□ 0.71
SPIRE1-201ENST00000309836 DIAPH1O60610 1272 aaKnown RBP19.51■□□□□ 0.71
SPIRE1-201ENST00000309836 MVPQ14764 893 aaKnown RBP19.51■□□□□ 0.71
SPIRE1-201ENST00000309836 ATP7BP35670 1465 aa19.51■□□□□ 0.71
SPIRE1-201ENST00000309836 IL16Q14005 1332 aa19.51■□□□□ 0.71
SPIRE1-201ENST00000309836 ZKSCAN2Q63HK3 967 aa19.5■□□□□ 0.71
SPIRE1-201ENST00000309836 WAPLQ7Z5K2 1190 aa19.5■□□□□ 0.71
SPIRE1-201ENST00000309836 NRXN3Q9Y4C0 1643 aa19.5■□□□□ 0.71
SPIRE1-201ENST00000309836 LRRC7Q96NW7 1537 aa19.5■□□□□ 0.71
SPIRE1-201ENST00000309836 PDZRN3Q9UPQ7 1066 aa19.49■□□□□ 0.71
SPIRE1-201ENST00000309836 DZIP1LQ8IYY4 767 aaKnown RBP19.48■□□□□ 0.71
SPIRE1-201ENST00000309836 SEC24BO95487 1268 aa19.48■□□□□ 0.71
SPIRE1-201ENST00000309836 RIPK4P57078 832 aa19.48■□□□□ 0.71
SPIRE1-201ENST00000309836 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
SPIRE1-201ENST00000309836 SMC4Q9NTJ3 1288 aa19.48■□□□□ 0.71
SPIRE1-201ENST00000309836 ZMYM3Q14202 1370 aa19.46■□□□□ 0.71
SPIRE1-201ENST00000309836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.46■□□□□ 0.71
SPIRE1-201ENST00000309836 RWDD1Q9H446 243 aaPredicted RBP19.46■□□□□ 0.71
SPIRE1-201ENST00000309836 DAXXQ9UER7 740 aaPredicted RBP19.46■□□□□ 0.71
SPIRE1-201ENST00000309836 FAM135BQ49AJ0 1406 aa19.46■□□□□ 0.71
SPIRE1-201ENST00000309836 TRIM27P14373 513 aa19.45■□□□□ 0.7
SPIRE1-201ENST00000309836 FTSJ3Q8IY81 847 aaKnown RBP19.45■□□□□ 0.7
SPIRE1-201ENST00000309836 POLKQ9UBT6 870 aa19.45■□□□□ 0.7
SPIRE1-201ENST00000309836 FBLN1P23142 703 aa19.44■□□□□ 0.7
SPIRE1-201ENST00000309836 RSPH6AQ9H0K4 717 aa19.44■□□□□ 0.7
SPIRE1-201ENST00000309836 MLECQ14165 292 aa19.43■□□□□ 0.7
SPIRE1-201ENST00000309836 FCHSD2O94868 740 aa19.43■□□□□ 0.7
SPIRE1-201ENST00000309836 PNNQ9H307 717 aaKnown RBP19.43■□□□□ 0.7
SPIRE1-201ENST00000309836 CPSF1Q10570 1443 aaKnown RBP19.43■□□□□ 0.7
SPIRE1-201ENST00000309836 METP08581 1390 aa19.42■□□□□ 0.7
SPIRE1-201ENST00000309836 NFKBIBQ15653 356 aa19.42■□□□□ 0.7
SPIRE1-201ENST00000309836 MAP2P11137 1827 aaKnown RBP19.42■□□□□ 0.7
SPIRE1-201ENST00000309836 EDC4Q6P2E9 1401 aaKnown RBP19.41■□□□□ 0.7
SPIRE1-201ENST00000309836 ATF7IPQ6VMQ6 1270 aa19.41■□□□□ 0.7
SPIRE1-201ENST00000309836 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
SPIRE1-201ENST00000309836 NOB1Q9ULX3 412 aaKnown RBP19.41■□□□□ 0.7
SPIRE1-201ENST00000309836 KNDC1Q76NI1 1749 aa19.41■□□□□ 0.7
SPIRE1-201ENST00000309836 PPIP5K1Q6PFW1 1433 aa19.4■□□□□ 0.7
SPIRE1-201ENST00000309836 WASLO00401 505 aaPredicted RBP19.39■□□□□ 0.7
SPIRE1-201ENST00000309836 MON2Q7Z3U7 1717 aa19.38■□□□□ 0.69
SPIRE1-201ENST00000309836 ITPRIPQ8IWB1 547 aa19.38■□□□□ 0.69
SPIRE1-201ENST00000309836 DDX19BQ9UMR2 479 aa19.38■□□□□ 0.69
SPIRE1-201ENST00000309836 CPS1P31327 1500 aa19.38■□□□□ 0.69
SPIRE1-201ENST00000309836 CDK12Q9NYV4 1490 aaPredicted RBP19.37■□□□□ 0.69
SPIRE1-201ENST00000309836 HDAC1Q13547 482 aaPredicted RBP19.37■□□□□ 0.69
SPIRE1-201ENST00000309836 NME9Q86XW9 330 aa19.37■□□□□ 0.69
SPIRE1-201ENST00000309836 TMEM57Q8N5G2 664 aa19.37■□□□□ 0.69
SPIRE1-201ENST00000309836 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
SPIRE1-201ENST00000309836 EMILIN1Q9Y6C2 1016 aa19.37■□□□□ 0.69
SPIRE1-201ENST00000309836 PHACTR3Q96KR7 559 aa19.37■□□□□ 0.69
SPIRE1-201ENST00000309836 NFE2L2Q16236 605 aa19.36■□□□□ 0.69
SPIRE1-201ENST00000309836 TXNDC2Q86VQ3 553 aa19.36■□□□□ 0.69
SPIRE1-201ENST00000309836 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.36■□□□□ 0.69
SPIRE1-201ENST00000309836 KIF16BQ96L93 1317 aa19.36■□□□□ 0.69
SPIRE1-201ENST00000309836 TECPR2O15040 1411 aa19.35■□□□□ 0.69
SPIRE1-201ENST00000309836 IL13P35225 146 aa19.35■□□□□ 0.69
SPIRE1-201ENST00000309836 ALDH1L2Q3SY69 923 aa19.35■□□□□ 0.69
SPIRE1-201ENST00000309836 AKAP12Q02952 1782 aa19.35■□□□□ 0.69
SPIRE1-201ENST00000309836 HMOX1P09601 288 aa19.35■□□□□ 0.69
SPIRE1-201ENST00000309836 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
SPIRE1-201ENST00000309836 AATKQ6ZMQ8 1374 aa19.34■□□□□ 0.69
SPIRE1-201ENST00000309836 C3P01024 1663 aa19.34■□□□□ 0.69
SPIRE1-201ENST00000309836 NCKAP5LQ9HCH0 1330 aa19.34■□□□□ 0.69
SPIRE1-201ENST00000309836 TBC1D32Q96NH3 1257 aa19.33■□□□□ 0.69
SPIRE1-201ENST00000309836 ZBTB40Q9NUA8 1239 aa19.33■□□□□ 0.69
SPIRE1-201ENST00000309836 THUMPD2Q9BTF0 503 aaKnown RBP19.33■□□□□ 0.68
SPIRE1-201ENST00000309836 KIF13AQ9H1H9 1805 aa19.32■□□□□ 0.68
SPIRE1-201ENST00000309836 ITSN1Q15811 1721 aa19.32■□□□□ 0.68
SPIRE1-201ENST00000309836 IPO8O15397 1037 aaKnown RBP19.32■□□□□ 0.68
SPIRE1-201ENST00000309836 SIRT1Q96EB6 747 aa19.32■□□□□ 0.68
SPIRE1-201ENST00000309836 BRPF1P55201 1214 aaPredicted RBP19.31■□□□□ 0.68
SPIRE1-201ENST00000309836 SMC5Q8IY18 1101 aa19.31■□□□□ 0.68
SPIRE1-201ENST00000309836 PRR36Q9H6K5 1346 aa19.3■□□□□ 0.68
SPIRE1-201ENST00000309836 TNRQ92752 1358 aa19.29■□□□□ 0.68
SPIRE1-201ENST00000309836 DLG5Q8TDM6 1919 aa19.29■□□□□ 0.68
SPIRE1-201ENST00000309836 UBR1Q8IWV7 1749 aa19.29■□□□□ 0.68
SPIRE1-201ENST00000309836 FRAT2O75474 233 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms